Tuber melanosporum: GSTUM_00005899001
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Entry
GSTUM_00005899001 CDS
T01282
Name
(RefSeq) hypothetical protein
KO
K16578
CLIP-associating protein 1/2
Organism
tml
Tuber melanosporum
Brite
KEGG Orthology (KO) [BR:
tml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tml03036
]
GSTUM_00005899001
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tml04812
]
GSTUM_00005899001
Chromosome and associated proteins [BR:
tml03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
GSTUM_00005899001
Cytoskeleton proteins [BR:
tml04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
GSTUM_00005899001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLASP_N
XMAP215_CLASP_TOG
CEP104-like_TOG
TOR1L1_N
Motif
Other DBs
NCBI-GeneID:
9186405
NCBI-ProteinID:
XP_002838032
INRA:
GSTUM_00005899001
UniProt:
D5GCI0
LinkDB
All DBs
AA seq
1352 aa
AA seq
DB search
MSVGADVPEHLLVVLRGHDVDQKVAEFSSVKAQVKHYFVQVEAINPLFEACRIGISSSNN
TLSLHALSCLGHLIKRVTLQDQARIKPQVHHILPLLIEKLGDQKDRNRSIALTALLDLWK
TTPNEIERGIKEMGFSSKNPKARQESLNWLLQVHSAGQGFSFRSFTPFMIKALEDASEPV
REASKEVVVELFKNAPDHAKSDLKRELKKREVRKGIATYIVNQLGLPGAGDVMGSSVRSL
DGHEDDGVSRQGHSMAGSINGSMASSTYVASLAGSELDTLEPAYVNTNRELEEILHGMVE
SFDGRESEGNWAARDRNITKLRQLVRGNAYRDYQTTFLAGIKSLLDGILKVVNSLRTIVA
TNGCQLVKDLAKIVGPGLDPMVEILLSSFIKLCAGTKKITSQLGQVTTAMLIANISYHSK
ILQHMWAACNDKNVQPRSYASGWLKALLEAHVDQKAYIEHSGGTDLIEKCLKKGMSDANP
GVREGMRQTYWLFASIWPERAEVMMEGLDNNTKKLLAKDNPNAPVTAQLKGVNSLRAPLG
RGAAAGVPGRPSVKEAILASKRSRGNLRAQPERAETLATLPMVGASPAPTTSGLASAPVR
PRRDPAKGGNRVDKQTYDAGAFARAATPTGTYPSTRTSPLGTRGNGVRSPTMNSPPRIHE
RLARGMTPARQQSPAATRKLTVLEQLNHVDWKVRVEGVIIVACILAKRIPPNYDGQKMPT
LPPSDVFAPTLAKLLNDPQPEVVEHVVAPEVLAELIKVVPMDQIVPKVLLLSEGDDAEHS
QPITSYSIPALKQLMTESEATELLFRILTSMGVSGVVPRKLALGSFTTTQKRKIIHGCLI
WMNEIVESHLNGSPNEFLSDVSNFKLYVNRLIAMLNNTRVPNYNPLTGLLKNLQRLDLEA
FDKILNTFESQTVRDLKKAWGVNVEEDGDLIVVEEKVADVEQVLGSVPRIGMRSPPRNFS
PTLKKGNYFPESPQNLKDEDITMISLPPLPPAPRPVTPTRANVQDNVTDLPPLPSTPESN
SKSLASQNGTGRRSSRADDKNPIIKVYQDPVIESNGAVATSTGVDKGPAAGTGEWYRSKM
KKQISNSNLPKTPEHSSRLLLTLITRLQNREIDTQAFRKLIGIARENPVRAVLQENNGET
FHDIWEGGKVFDELLQALLEYLEDNSIDAERAADLRVQGLLVLKQLLSKTAPYFSRHEAP
VLHTLIDLRGKYPTQSHVTTGIEEIVEEFMAIVDPTTGIEAILNVSLPRDKPGFRQATQS
WCMSLTCLAALVRASKIASLEPQFARLGQLAVKSLDDEDAEVRRACVSMCIEMHSKLRND
ERLFDQILKGMKSGHQNLLTYYFAKREGEARK
NT seq
4059 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtgggagcagacgttccggaacacctattggtggtgctccggggccatgacgtt
gatcaaaaggttgccgagttttcgagcgtcaaggcgcaggttaagcactattttgttcag
gtcgaagcaattaatccactgttcgaagcttgtcgcatcggaatttcttcctctaataac
acactttctctacatgccttgtcgtgcctgggccacttgattaaacgggtaactcttcaa
gaccaggcacgtataaagccacaggtacatcatattctgccgctcctcatagaaaagctt
ggggaccagaaggaccggaaccggtcgatagcattgaccgcattacttgatctctggaaa
accacaccaaacgagattgaacgtggtatcaaggagatgggattcagtagtaagaatcca
aaggcaaggcaggagagtttgaattggcttctacaggtacacagtgctgggcaagggttt
tccttccggagttttacaccttttatgatcaaggcactggaagatgccagcgagcctgtg
agggaagcttcaaaggaggttgtcgtggagctattcaagaatgctccggatcacgcgaaa
tcggatcttaaacgggaattaaagaaacgcgaagtaaggaaaggaatcgctacatatatt
gtcaaccagcttggactacccggagctggtgacgtcatgggaagttctgtaaggtcctta
gatggccacgaagatgatggtgtgagccggcaaggccatagtatggcgggcagcattaac
gggagtatggcttcatcaacatacgttgccagccttgctggaagcgaactcgatacgctg
gaacccgcgtatgtgaacacgaaccgtgaactcgaagagattcttcatggtatggtggag
tcttttgatgggagagaatctgaagggaactgggctgctcgggatcggaacattacaaag
ctccgacagttggtaaggggcaacgcttatagggattaccagacaacatttctggccgga
attaagtcgttactcgatggaattctgaaggtggtcaattctttacggacaatagtggca
acaaacggatgccagctggtcaaggatctcgcaaagatcgtcggccctggattggacccc
atggttgaaatattactatccagcttcattaagctgtgcgcagggacgaagaaaattacg
tcacagctcgggcaagttactacggcgatgctgatcgcaaacatctcttaccactcgaag
atcttacagcacatgtgggcggcgtgtaacgacaagaatgtgcaacctaggagctatgct
tccggatggttgaaggctttattggaggctcatgttgatcagaaggcgtatattgagcat
tctgggggaactgacttgattgagaaatgcctgaagaagggcatgtccgatgccaaccca
ggtgttagagaggggatgagacagacttattggctatttgcttctatatggcctgagcgt
gctgaagtgatgatggagggtcttgataacaataccaagaaactattggccaaggataac
ccgaatgctcccgtgactgcgcaacttaagggcgtcaatagcttgagagcaccactgggt
agaggcgctgccgccggtgtgccagggagaccttctgtgaaggaggcaatactcgcgtct
aagagaagtcggggtaacctacgagcccagcctgaacgcgctgagactttggcaactttg
cctatggttggcgcctcgcctgctccgaccacttctggccttgcatctgctcctgttcga
ccccgtagagacccagcgaagggcggaaatagggtagacaagcaaacctatgacgctggt
gctttcgcccgtgcagccactcctacagggacatacccatctactcggacgtcacctctt
ggcactcgtggcaatggtgtgcggtcacctactatgaattcgcctccgagaattcatgaa
cgccttgcgcgtggtatgacaccagctcgccaacagagcccagccgctacccggaaactt
actgttttggaacaattgaatcacgtagactggaaagtgagggtcgaaggtgtcatcatt
gttgcctgtatcctggcgaaacggatacccccaaactacgatggtcagaagatgccgacg
ctcccgccaagtgatgtgtttgctccaactctagcaaagcttctgaacgatccccagccg
gaggtggtcgaacatgttgtggcaccggaagtcttggcggaattgatcaaggtggtgccg
atggatcagattgttcctaaagtgttactccttagtgagggtgatgatgctgagcattcg
caaccgattacctcgtatagcattcccgctttaaagcaattgatgacagaatcagaagct
acagagttactgttcagaattttaaccagcatgggtgtctctggggttgtccctaggaag
ttggcgcttggatcgttcactactactcagaagcgcaagatcattcatggatgcctgatt
tggatgaatgaaatcgtggaatcacatctcaatggatcacccaatgaatttttgagcgat
gtctccaatttcaagctctatgttaaccggctgatcgcgatgcttaacaatacgagagtg
ccgaactacaatccgctaactggactcctaaagaaccttcagcgattggacctggaggcc
tttgataagattttgaatacctttgaatcgcagacagtgcgtgatctaaagaaggcctgg
ggtgtgaatgtggaagaggatggagatttaatagttgttgaggagaaggttgcggatgtg
gagcaggtactgggcagcgttcctcgtattgggatgagaagcccgcctcggaacttttct
cccactttgaagaaaggtaattattttccagagagtcctcagaatcttaaggatgaggat
atcaccatgataagccttcctccgcttcctcctgcgcctaggcctgtcacacctacacga
gcgaatgttcaagacaatgtcacggatctaccacccctaccctctacgccagagagcaac
tcgaagtctctcgcaagccagaatggaaccggccgacgatcttctcgtgcggatgataag
aatccgataatcaaagtctaccaagatccggtgattgagtcgaatggagctgttgctacg
agcaccggcgttgataaggggccggccgccggaactggtgaatggtatcggtcaaagatg
aagaagcaaattagcaattccaacctgccaaagactcccgaacactcttcgcggttatta
ctcacgcttattaccagacttcaaaatcgtgagattgacacacaagccttcagaaagcta
attggtattgcgagggagaaccccgtgagggctgtgctgcaggagaacaatggcgagaca
ttccacgacatctgggagggtggaaaggtatttgatgagttgcttcaagccttattagag
tatcttgaggacaattcaatcgatgccgagagggcggcggacctccgtgtacaagggctg
ctggtgcttaaacaactgctgtcgaagactgctccctatttctcacgacacgaggcgccg
gttttgcatactcttatcgatctgaggggcaaatacccaacccagtctcatgtcactacc
gggattgaggagattgtcgaggagtttatggcgatcgtggatcccacaactggaatcgaa
gcgatcctgaatgtctcgcttcctcgagacaagcccggattccgacaggcgactcagagt
tggtgcatgagtttgacttgccttgctgcgcttgtcagagcatctaagattgcttcatta
gaacctcagtttgcaaggctgggccagttagctgttaagtctctcgacgacgaagatgcg
gaagtgagaagggcctgtgtgtcgatgtgtattgagatgcacagcaagctcagaaacgat
gagaggctatttgaccaaatcctcaagggtatgaagtctggccaccaaaatctcctcaca
tactactttgcgaagagggaaggcgaggcaagaaaatga
DBGET
integrated database retrieval system