Tuber melanosporum: GSTUM_00006080001
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Entry
GSTUM_00006080001 CDS
T01282
Name
(RefSeq) hypothetical protein
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
tml
Tuber melanosporum
Pathway
tml04138
Autophagy - yeast
tml04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
tml00001
]
09140 Cellular Processes
09141 Transport and catabolism
04138 Autophagy - yeast
GSTUM_00006080001
04148 Efferocytosis
GSTUM_00006080001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tml04131
]
GSTUM_00006080001
Membrane trafficking [BR:
tml04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
GSTUM_00006080001
Hops complex
GSTUM_00006080001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pep3_Vps18
Clathrin
TPR_Vps41
HBM
COG4_N
Motif
Other DBs
NCBI-GeneID:
9183933
NCBI-ProteinID:
XP_002838278
INRA:
GSTUM_00006080001
UniProt:
D5GD76
LinkDB
All DBs
AA seq
878 aa
AA seq
DB search
MAGPGFGSASAAIPDLSADLLPIFHVEHVQLQFQVASGFVAVQVANNVIIIALASGRLLR
IDLASPQDIDDIDLPRKISEVGAIRRIFLDPTASHLLITTTHGENFYLHSRSAKARHLSR
LKSLHIECVAWSPALPTASTREILIGTQDGSIYETYIEGMEDNFMRKDERYLKQVYKTPD
NHSVTGLWVDGLPGNQQLRRVIVSTPGQIMHWVGKVQRHADPGSIFLKFFDSEAPIIQDF
HDTSANHSVLSISPESSDEYEPERSFAWLTTPGIYHGKLLIAPQNSDLGAHVLSTSKLFS
SDSLPSADSPVASIALTHHHVLVLTDTTLYAINQLDDSIVFQQTLVDPGTTVLGLCSDPK
KSTFWVFTSAEIYEIGDYLVASGKYMGAAEIWGKSSKSFEEVALTFLERGEQDALRMYLL
AKLANLKKSSVMQRIMVASWLIEVFMAKLNTLEDAVSTLASHAGAGAATSPNIQTQLTSV
QLEYQDFVGKYKSDLDRKTTYEIISSHGRRDELLYYANSVHDYGYVLAYWIQREKWLEAL
DVLKRQNDPEIFYKYSSVLMSNAPMETVDILMRQSNLNPRNLIPAMLNYNKYTRVALGKN
QAVRYLLFVIHQNGSTDAAVHNTLISIYASHYSKGESSLLEYLESHTVDPRYDADFALRL
CIQHSHIQSCVHIYSSMGLYLQAVELALKHGNVELASVIADRPEEDPELRKHLWLAVAKE
VIRGAKDIKTAIEFLKRCELLKIEDLIPFFPDFTIIDSFQEEICTALEDYSHHIDQLKKE
MDESTHTASHIRSDIIALDQRYAIVEPGERCYVCVGRSRKVRELKEEIEHARGKRREAKV
EEFDALVAAECVLCSEFAIKKIDEPFVSLADNLADWAL
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atggccggcccaggctttggctctgcttctgctgctatcccggatctttccgctgatctc
ctgccgatattccacgttgagcacgttcagcttcaattccaggtagcttccggtttcgtc
gctgtccaggttgctaataatgttattatcatcgccctcgcttccggaaggcttctgcga
atagatttagcctcccctcaggacatcgatgacatcgaccttccccgcaaaatctcggaa
gttggtgctattcgtcggatcttccttgaccccactgcttcccatttgctcataactact
acccacggtgagaacttttatctccattcacggtctgcaaaggctcgacatctttctcgc
ttaaaatcccttcacatcgagtgcgtagcctggtcacctgccctacccacggcctcgaca
cgggagatcttgattggaactcaggatgggagcatatatgaaacctatattgagggaatg
gaagataattttatgagaaaagatgagaggtacttgaaacaggtctacaagactcccgac
aatcactcagttactggactgtgggtggatgggttgccggggaaccagcaattgaggcgg
gtgattgtttcaacgcccgggcagataatgcattgggtcgggaaagtgcagaggcatgct
gatccagggtcaatattcctcaaattttttgattcggaggctccaataattcaggatttc
catgacacatcggctaaccatagcgtactttcaatatctccggaatcctctgacgagtat
gagcctgagagatcgttcgcttggctcacaactccagggatctatcacggaaagcttctt
attgcaccacaaaactctgaccttggcgcccatgtcctgtctacgtcgaagctgttttca
tcagattcccttccaagtgcggatagtccagtagcatcaatagccttaacgcatcaccat
gtgctagtgcttaccgacactaccctctacgctattaaccagctggatgatagcattgtg
tttcagcagaccctggtagacccggggacgactgttttgggcctttgtagtgatcctaag
aagtctactttctgggtttttacctcagcagagatatacgagatcggtgactacttagtg
gcaagtgggaaatacatgggggccgctgagatctggggaaagagtagtaagagcttcgag
gaggttgctctaacgtttttggaaaggggcgaacaagatgccttgcggatgtatctgttg
gctaaactggccaatttgaagaagagttctgtaatgcaaaggatcatggttgctagttgg
ttgatcgaagtctttatggcaaagctgaacactctagaggacgcagtatcaacgttggcc
tctcatgctggtgccggggcagctacatcacctaacatccagacacaattgacttcagtt
cagctcgaatatcaagatttcgtcggcaaatataaatcagatcttgatcggaagacaacc
tacgagatcatatcctcgcacggccgaagggatgagcttctgtactacgcaaacagtgtc
catgattacggctatgtactggcgtattggattcaacgggaaaaatggctagaggcctta
gacgtgctaaagcggcaaaacgatccggaaatcttctacaagtactccagtgttctaatg
agtaatgctcctatggagacagtggatattctaatgcgccaatcaaatctcaacccccgc
aatttaataccagcgatgctcaattacaacaagtacacaagggtggcccttgggaaaaac
caggctgttcgctatcttctgtttgtaatacatcagaacggttccactgatgccgctgtt
cataatactctaatcagtatatatgcctcacattactcgaaaggcgagtcctcgctatta
gagtacctcgaatctcacaccgttgatccccggtacgatgcagactttgcactcaggttg
tgcattcagcatagtcatatccagagctgtgtacatatctactcgagcatgggcctttac
ttgcaggcggtcgaacttgcactcaagcacgggaatgtcgaacttgctagcgtcatagca
gacaggccagaagaggatccagaattgcggaaacatctatggttggcggttgccaaggag
gtaatccggggagcaaaggatatcaaaacagcaattgagttcctcaaacgctgcgaactt
ctcaaaattgaagacctaataccttttttcccggatttcaccataattgactccttccaa
gaggaaatctgcacagctctcgaagactactcccaccacatcgaccaactcaagaaagaa
atggacgagtctacccacaccgccagccacatccgcagcgacatcatagccctagaccaa
cggtatgccatagtcgaacccggcgaacgatgttacgtgtgcgtaggccggagcaggaag
gttcgagagctcaaggaggagattgaacatgcaagggggaaacgccgtgaggcaaaggtg
gaggagtttgatgcgttggtcgcagcagagtgtgtgctctgcagcgagtttgctatcaag
aagattgatgagccatttgttagcttggcggataatttggcggattgggctttgtag
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