Tuber melanosporum: GSTUM_00006239001
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Entry
GSTUM_00006239001 CDS
T01282
Name
(RefSeq) hypothetical protein
KO
K01732
pectin lyase [EC:
4.2.2.10
]
Organism
tml
Tuber melanosporum
Brite
KEGG Orthology (KO) [BR:
tml00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
GSTUM_00006239001
Enzymes [BR:
tml01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.10 pectin lyase
GSTUM_00006239001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
9181664
NCBI-ProteinID:
XP_002838468
INRA:
GSTUM_00006239001
UniProt:
D5GDR6
LinkDB
All DBs
AA seq
321 aa
AA seq
DB search
MLKKEYNFIGSQGTVTETGCRPASNTCPNSGGQDAINGASWCTKSGYPGISVTYDKAGTT
FIDVKSNKSIVGKGTAGVIKGIGLRIANGVSNVIIQNVHFTYLNPQYIWGGDAITLAGSD
MFSLIGRQMIVTGYSKAGRVTISNNELDGNTSWSATCNGQHYWTMLFLGSSDLITLTGNY
IHDCSGRAPKVGGASTSNVVVHAVNNYFSNIGRHSFDLETGGMALIEGNVFESVTTTITS
TSVSAGGRIFNVYSASDANTCTASLGRSCVQNSVSGSGYWKAYTTSSFLTKFSGNNVQPA
SPVGGVKASVMSNAGIGHIGN
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgttgaagaaggagtataactttattggttcccagggaacagtgactgaaactggttgc
cgtccagcgagtaacacttgccccaattctggtgggcaagatgccataaacggagccagt
tggtgcacaaagagcgggtatccaggtattagtgtgacatacgacaaggctggaaccacc
ttcatcgatgtcaagagcaacaagagtattgttggaaagggaacagcaggagtgattaaa
ggaattggccttcggattgcaaacggagtttccaacgttatcattcagaacgtccacttt
acctacttgaatcctcaatacatctggggcggtgatgccatcactcttgctggctctgat
atgttctccctcatcggtcgccaaatgattgtcactggctacagcaaggctggcagggtc
accatctctaacaacgaactcgacggaaacacgagttggtccgccacctgcaatggccag
cactactggacaatgctcttcttgggatccagcgatttgatcaccttgactggcaactac
atccacgactgctctggccgtgcccccaaggtcggtggtgcaagcacctcgaacgttgtg
gtccacgcggtcaacaactacttcagtaacataggtcgccactcattcgacctggaaacc
ggcggcatggccctcatagaggggaacgttttcgaatccgtgacaacaacaatcacatcc
acatccgtatcggccggcggccgcatcttcaacgtctactctgccagcgacgccaatacc
tgcaccgcatccctcggccgctcgtgcgttcagaactccgtctcgggcagcggctactgg
aaagcgtacacgacgtcaagcttcttgaccaaattttccggaaataacgtccagccagcc
tcgcccgttggcggtgtaaaggctagcgtcatgtcaaacgccggtatcgggcacatcggg
aactag
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