Tuber melanosporum: GSTUM_00006258001
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Entry
GSTUM_00006258001 CDS
T01282
Name
(RefSeq) hypothetical protein
KO
K11771
SWI/SNF chromatin-remodeling complex subunit SWI1
Organism
tml
Tuber melanosporum
Brite
KEGG Orthology (KO) [BR:
tml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tml03021
]
GSTUM_00006258001
03036 Chromosome and associated proteins [BR:
tml03036
]
GSTUM_00006258001
Transcription machinery [BR:
tml03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SWI/SNF complex
GSTUM_00006258001
Chromosome and associated proteins [BR:
tml03036
]
Eukaryotic type
Chromatin remodeling factors
SWI/SNF complex
GSTUM_00006258001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ARID
Motif
Other DBs
NCBI-GeneID:
9184468
NCBI-ProteinID:
XP_002838482
INRA:
GSTUM_00006258001
UniProt:
D5GDT0
LinkDB
All DBs
AA seq
1001 aa
AA seq
DB search
MSVPSAPGWLQDAPAVQNSTFAGPEASSVTAMHSPFDPGAAVITPSTIDPHQFQQQAHPR
AQIQNGNPRTSSPGFQQSAYNVNPVVPLKRPRPREDPITVSPRQTTANPPTSRSQTPHAS
GPQLAYQIYQSNAGAAQQRQYTPVGYSSHSHLQHVGSANASPSPVMQNQTYNQPPPKRVA
TQSPSPFSPAPPQQPFMPQGSPPPNQVSRVSTPQNSNMNLAPPPQTPYSQSFTQAFSPPS
TAASAPPTPVPNQQMQNPAQAHMMYQLRTPPHVGPNSMNPGQIPRPQGQQPLQGSGSNPS
QPHSDPNHFMKSLYNFMSKNGTPIQGQSYIGGRAVSLVNLYTNVLKLGGSQKVTMENKWH
AVSMSLGFSPESFPTAADDLVQIFKLNLSAYEQAWLRDRRDPKKVAIARGQQSGPDMRQQ
MHPQQQTKPMPNPQQMQHTRPQGMPKQPQTPVPNNHARSNLHNGFIPQPRQPSRQPPQYS
QLPSTPNRISLDSPPQGHIPPNYPLSAPQIPVKPSVLPDAIPFSQPQNNALKEIPSDFKP
KVRGLDTHGGLNVSVLSQIGNDFMFHKPTTPTFQELGVIDVHALTMMLKCGISAEVRLAL
DTLATVSVESRWSLALESCEDLIETLVDVAESQVEILGEHAEESSEAIAVPAYEDIVRAC
KAETVGLIDVARFGSLEHELEKSADKLICITTIFRNLSFFESNHKALADPNVVRFLSGVI
ERLGTSKLLLRTNTNTLDFMKDIIIFLSNLSHSITLPSEDEALNLLHLILAFAPQPLPAA
SGRDTLMFTSYSPSIHRYLPPAVDSLAKLLARDEPNRAFYRTIFLSESSTTPSYDLLTRS
FALAISPIPDNMKVALPQAVEARKPFLEQGMLAAEILAGIAPGPDQGVARSWLSSEDGFA
LSLLRLVCLLSPQVTPMHPRQSGQTGKMPNLDDSQPFARITHRGMGVLQKLAEKSGDAAG
DHSKIPLGVLPKKESLLGALLTVQIDGVIVKKLCTYAGLNG
NT seq
3006 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtgccttctgcgcctggttggttgcaagacgccccggctgttcagaactctacg
ttcgctggccctgaagcctcttctgtgacggcaatgcactctcctttcgatcctggtgcg
gctgtgataactccgtcgaccatagatccccatcagttccagcaacaggcccatccgcgc
gctcagattcagaatggcaatccgcgaacctcttctccgggattccagcagtcagcgtat
aatgttaatcccgtagtcccattaaaacgaccgagacctcgcgaagaccctatcactgtg
tctcctcgtcaaaccaccgcaaatccccctacttcgcgatcgcagacgcctcatgcttcc
ggtcctcagttagcctatcaaatttatcaaagcaatgcgggcgccgcgcagcagcgacaa
tacacccctgtcggctactcgtctcactcgcatctccagcatgtagggtctgctaatgcg
agcccttcccctgtaatgcagaaccaaacctacaaccaacctccacccaaacgcgtcgca
acccaatctccatctcccttttcacccgcaccaccacaacaaccattcatgccccaaggc
tccccaccgccaaaccaagtctcgcgtgtcagcacaccccaaaacagcaatatgaacctg
gcgccaccccctcaaaccccatattcccaatcatttacccaagcgttctccccgccttcc
accgctgcatccgccccgcctactcctgtcccgaaccagcagatgcaaaacccagcacaa
gcgcacatgatgtatcagcttcgcacgcctcctcatgtgggaccaaattctatgaatccg
ggtcagattccacggccccaagggcaacaaccccttcaaggctcagggtcaaatccaagt
cagccgcatagtgaccctaatcatttcatgaagagtctatacaatttcatgagcaagaac
ggcacacctatccagggtcagtcatacattggtgggagggcagtaagcctggtaaacctt
tatacgaacgttttgaagttggggggttcacaaaaggtcacgatggagaataagtggcac
gcggtgtccatgagtctcggcttttctcccgagtcgtttcccactgccgcggacgattta
gttcaaattttcaagttgaacttatctgcctatgagcaggcctggctgcgggatcggagg
gatccgaagaaagtggcaatagcaaggggtcagcagtccgggccagatatgaggcagcaa
atgcatcctcaacagcaaacaaaaccgatgccaaatccccaacagatgcagcatacaagg
cctcaaggaatgcccaaacaacctcaaacacccgtgccgaataatcacgcgaggtcaaat
cttcacaacgggtttattccccagcctagacagccttcaagacaacctccccaatacagc
caactccctagtactccgaaccgcatttctttggattcaccaccgcaaggccacattccg
ccaaattatcctttgtctgcccctcaaatccccgtgaaacctagtgttctacctgatgca
atccctttctcacagccacaaaataatgccttgaaagagattccatccgatttcaagccc
aaagttcgaggattggatacccatggagggttgaatgtctctgttttgagccaaatagga
aatgactttatgtttcacaagcctacgacgccgacattccaggaattgggggtgatagat
gttcacgctttaacgatgatgctcaagtgtggtatatccgctgaggtacgactcgccctg
gacacgctggcgaccgtatctgtggaatctagatggtctcttgcattggaaagttgtgaa
gatttgattgagacattagtagatgttgctgagtctcaggttgagatcttaggggaacat
gctgaggagagctcggaagcaattgctgttccggcttacgaggatatcgtgagggcttgt
aaagcggagactgtggggcttattgatgtcgcgcggttcgggtccttggagcatgaactg
gaaaagtcggctgataaacttatttgcattactacgatttttcggaatctttcgtttttt
gagtcgaatcacaaggcgcttgcggatccaaatgtggttagatttttatcgggcgttatc
gaaaggctgggtaccagtaagctattgttgaggacaaataccaacaccttggatttcatg
aaggacatcatcatctttctgtcgaacctttcgcactcaatcacattgccaagtgaagat
gaggcgcttaatctgttgcatttgatattggccttcgcccctcaacccctaccagcagca
tcggggcgagataccctgatgtttacctcctactctccttcgatccatcgctatctgccc
cccgcagtagacagtttggctaagttgcttgctcgggatgagcccaatcgtgccttttat
cgtacaatattcctttcggagtcctcgacaacaccttcctacgatcttctcactcgatca
ttcgccctggcaatatctccaattcctgataacatgaaggtcgcgcttccccaagccgta
gaggcacggaaacctttcttagaacaaggaatgcttgctgctgagattcttgctggaatt
gcacctggccccgatcaaggcgtagcccgctcctggttatcctccgaggatggatttgcg
ctcagcctactgcgactcgtctgcttgctgagtcctcaagtgaccccaatgcacccccgt
cagtcgggccaaactggaaagatgcctaatctcgatgattcgcaaccctttgcgagaatc
acgcatcggggcatgggtgtcttacaaaagctggcggaaaaatctggagatgcagctggt
gatcattcgaaaatacctcttggagttttaccgaagaaggagagtcttttgggagcattg
ttgacggttcagatagatggagttattgtcaaaaagctttgtacttatgccgggttaaat
ggttga
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integrated database retrieval system