KEGG   Tuber melanosporum: GSTUM_00006258001
Entry
GSTUM_00006258001 CDS       T01282                                 
Name
(RefSeq) hypothetical protein
  KO
K11771  SWI/SNF chromatin-remodeling complex subunit SWI1
Organism
tml  Tuber melanosporum
Brite
KEGG Orthology (KO) [BR:tml00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tml03021]
    GSTUM_00006258001
   03036 Chromosome and associated proteins [BR:tml03036]
    GSTUM_00006258001
Transcription machinery [BR:tml03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    SWI/SNF complex
     GSTUM_00006258001
Chromosome and associated proteins [BR:tml03036]
 Eukaryotic type
  Chromatin remodeling factors
   SWI/SNF complex
    GSTUM_00006258001
SSDB
Motif
Pfam: ARID
Other DBs
NCBI-GeneID: 9184468
NCBI-ProteinID: XP_002838482
INRA: GSTUM_00006258001
UniProt: D5GDT0
LinkDB
AA seq 1001 aa
MSVPSAPGWLQDAPAVQNSTFAGPEASSVTAMHSPFDPGAAVITPSTIDPHQFQQQAHPR
AQIQNGNPRTSSPGFQQSAYNVNPVVPLKRPRPREDPITVSPRQTTANPPTSRSQTPHAS
GPQLAYQIYQSNAGAAQQRQYTPVGYSSHSHLQHVGSANASPSPVMQNQTYNQPPPKRVA
TQSPSPFSPAPPQQPFMPQGSPPPNQVSRVSTPQNSNMNLAPPPQTPYSQSFTQAFSPPS
TAASAPPTPVPNQQMQNPAQAHMMYQLRTPPHVGPNSMNPGQIPRPQGQQPLQGSGSNPS
QPHSDPNHFMKSLYNFMSKNGTPIQGQSYIGGRAVSLVNLYTNVLKLGGSQKVTMENKWH
AVSMSLGFSPESFPTAADDLVQIFKLNLSAYEQAWLRDRRDPKKVAIARGQQSGPDMRQQ
MHPQQQTKPMPNPQQMQHTRPQGMPKQPQTPVPNNHARSNLHNGFIPQPRQPSRQPPQYS
QLPSTPNRISLDSPPQGHIPPNYPLSAPQIPVKPSVLPDAIPFSQPQNNALKEIPSDFKP
KVRGLDTHGGLNVSVLSQIGNDFMFHKPTTPTFQELGVIDVHALTMMLKCGISAEVRLAL
DTLATVSVESRWSLALESCEDLIETLVDVAESQVEILGEHAEESSEAIAVPAYEDIVRAC
KAETVGLIDVARFGSLEHELEKSADKLICITTIFRNLSFFESNHKALADPNVVRFLSGVI
ERLGTSKLLLRTNTNTLDFMKDIIIFLSNLSHSITLPSEDEALNLLHLILAFAPQPLPAA
SGRDTLMFTSYSPSIHRYLPPAVDSLAKLLARDEPNRAFYRTIFLSESSTTPSYDLLTRS
FALAISPIPDNMKVALPQAVEARKPFLEQGMLAAEILAGIAPGPDQGVARSWLSSEDGFA
LSLLRLVCLLSPQVTPMHPRQSGQTGKMPNLDDSQPFARITHRGMGVLQKLAEKSGDAAG
DHSKIPLGVLPKKESLLGALLTVQIDGVIVKKLCTYAGLNG
NT seq 3006 nt   +upstreamnt  +downstreamnt
atgtcagtgccttctgcgcctggttggttgcaagacgccccggctgttcagaactctacg
ttcgctggccctgaagcctcttctgtgacggcaatgcactctcctttcgatcctggtgcg
gctgtgataactccgtcgaccatagatccccatcagttccagcaacaggcccatccgcgc
gctcagattcagaatggcaatccgcgaacctcttctccgggattccagcagtcagcgtat
aatgttaatcccgtagtcccattaaaacgaccgagacctcgcgaagaccctatcactgtg
tctcctcgtcaaaccaccgcaaatccccctacttcgcgatcgcagacgcctcatgcttcc
ggtcctcagttagcctatcaaatttatcaaagcaatgcgggcgccgcgcagcagcgacaa
tacacccctgtcggctactcgtctcactcgcatctccagcatgtagggtctgctaatgcg
agcccttcccctgtaatgcagaaccaaacctacaaccaacctccacccaaacgcgtcgca
acccaatctccatctcccttttcacccgcaccaccacaacaaccattcatgccccaaggc
tccccaccgccaaaccaagtctcgcgtgtcagcacaccccaaaacagcaatatgaacctg
gcgccaccccctcaaaccccatattcccaatcatttacccaagcgttctccccgccttcc
accgctgcatccgccccgcctactcctgtcccgaaccagcagatgcaaaacccagcacaa
gcgcacatgatgtatcagcttcgcacgcctcctcatgtgggaccaaattctatgaatccg
ggtcagattccacggccccaagggcaacaaccccttcaaggctcagggtcaaatccaagt
cagccgcatagtgaccctaatcatttcatgaagagtctatacaatttcatgagcaagaac
ggcacacctatccagggtcagtcatacattggtgggagggcagtaagcctggtaaacctt
tatacgaacgttttgaagttggggggttcacaaaaggtcacgatggagaataagtggcac
gcggtgtccatgagtctcggcttttctcccgagtcgtttcccactgccgcggacgattta
gttcaaattttcaagttgaacttatctgcctatgagcaggcctggctgcgggatcggagg
gatccgaagaaagtggcaatagcaaggggtcagcagtccgggccagatatgaggcagcaa
atgcatcctcaacagcaaacaaaaccgatgccaaatccccaacagatgcagcatacaagg
cctcaaggaatgcccaaacaacctcaaacacccgtgccgaataatcacgcgaggtcaaat
cttcacaacgggtttattccccagcctagacagccttcaagacaacctccccaatacagc
caactccctagtactccgaaccgcatttctttggattcaccaccgcaaggccacattccg
ccaaattatcctttgtctgcccctcaaatccccgtgaaacctagtgttctacctgatgca
atccctttctcacagccacaaaataatgccttgaaagagattccatccgatttcaagccc
aaagttcgaggattggatacccatggagggttgaatgtctctgttttgagccaaatagga
aatgactttatgtttcacaagcctacgacgccgacattccaggaattgggggtgatagat
gttcacgctttaacgatgatgctcaagtgtggtatatccgctgaggtacgactcgccctg
gacacgctggcgaccgtatctgtggaatctagatggtctcttgcattggaaagttgtgaa
gatttgattgagacattagtagatgttgctgagtctcaggttgagatcttaggggaacat
gctgaggagagctcggaagcaattgctgttccggcttacgaggatatcgtgagggcttgt
aaagcggagactgtggggcttattgatgtcgcgcggttcgggtccttggagcatgaactg
gaaaagtcggctgataaacttatttgcattactacgatttttcggaatctttcgtttttt
gagtcgaatcacaaggcgcttgcggatccaaatgtggttagatttttatcgggcgttatc
gaaaggctgggtaccagtaagctattgttgaggacaaataccaacaccttggatttcatg
aaggacatcatcatctttctgtcgaacctttcgcactcaatcacattgccaagtgaagat
gaggcgcttaatctgttgcatttgatattggccttcgcccctcaacccctaccagcagca
tcggggcgagataccctgatgtttacctcctactctccttcgatccatcgctatctgccc
cccgcagtagacagtttggctaagttgcttgctcgggatgagcccaatcgtgccttttat
cgtacaatattcctttcggagtcctcgacaacaccttcctacgatcttctcactcgatca
ttcgccctggcaatatctccaattcctgataacatgaaggtcgcgcttccccaagccgta
gaggcacggaaacctttcttagaacaaggaatgcttgctgctgagattcttgctggaatt
gcacctggccccgatcaaggcgtagcccgctcctggttatcctccgaggatggatttgcg
ctcagcctactgcgactcgtctgcttgctgagtcctcaagtgaccccaatgcacccccgt
cagtcgggccaaactggaaagatgcctaatctcgatgattcgcaaccctttgcgagaatc
acgcatcggggcatgggtgtcttacaaaagctggcggaaaaatctggagatgcagctggt
gatcattcgaaaatacctcttggagttttaccgaagaaggagagtcttttgggagcattg
ttgacggttcagatagatggagttattgtcaaaaagctttgtacttatgccgggttaaat
ggttga

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