Tuber melanosporum: GSTUM_00006266001
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Entry
GSTUM_00006266001 CDS
T01282
Name
(RefSeq) hypothetical protein
KO
K08735
DNA mismatch repair protein MSH2
Organism
tml
Tuber melanosporum
Pathway
tml03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tml00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
GSTUM_00006266001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tml03400
]
GSTUM_00006266001
DNA repair and recombination proteins [BR:
tml03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
GSTUM_00006266001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_II
MutS_IV
MutS_I
Motif
Other DBs
NCBI-GeneID:
9184476
NCBI-ProteinID:
XP_002838490
INRA:
GSTUM_00006266001
UniProt:
D5GDT8
LinkDB
All DBs
AA seq
905 aa
AA seq
DB search
MGSRPELKVEDESAFISFFNSLPETDAIRLFDRNDYYTAHGQDAIYVAQTIYKTTSVIRQ
LGSSRNPLESCTLSVTAYRNFLRECLFQNRKRVEIWGAKLRNKWGITKKASPGNLQDVED
DFAGQIDSSPIILAVRISVKGEERNVGVCFADASVRELGVSEFADNDLYSNFESLIIQLG
VKECVVQSDEQNKDYELGKLRGIIERCGIVMTFRKASEFSVKDIEQDLSRLLTSEIAAGV
LPQVENKLAMAAASALIRYLQLMSDDLNFGQYRLYQHDLAQYMKLDASAVKALNLMPGPR
DGSKNMSLYGLLNKCKTAIGTRLLGQWLKQPLMSLEEIKKRQFLVEAFVEDTELRQTMQE
EHLKSIPDLYRLSKRFQKNLANLEDVVRAYQVAIRIPGFISTFEGVMDETYKDPLDLRYT
TKLREIYGNLEKLQELVETTVDLDALDNHEFIIKPEFSDDLKLVRDKLDKLKRAMDTEHH
RVGSDLGQEVDKKLFMENHKTYGWCFRLTRAEAGSIRNQKEYREISTMKNGVFFTTTVMQ
DLKRDFDKSTYIYNKTQSGLVDEVVTVASSYCPVLEELAAVLAHLDVIVSFAHVSVHAPS
PYVKPKMHARGEGNTILKEARHPCMEMQDDIQFITNDVSLCRGSSEFLIITGPNMGGKST
YIRQIGVIALMAQVGCFVPCSEAELTIFDCILARVGASDSQMKGVSTFMAEMLETSTILK
SATSESLIIIDELGRGTSTYDGFGLAWAISEHIVKEIRCFAMFATHFHELTALVDEYPSV
KNLHVIAHVTLLYKVDEGVSDQSFGIHVAELVRFPQKVINMAKRKADELEDFTGKHEQKA
SNCTREQIAEGSALLKKVLVEWKNKVEDSGMTPAQMRGELIKLIQAPEHKEALDNDPFFQ
SVKAL
NT seq
2718 nt
NT seq
+upstream
nt +downstream
nt
atgggatctcgccctgagcttaaggttgaggatgagagtgcctttatttcctttttcaac
agtcttcccgagacggatgccattcgactcttcgacagaaacgactactacactgcccac
gggcaggatgctatatatgttgctcagacgatctataaaactacatccgtcatccgacaa
ttgggcagctcgaggaacccccttgagtcatgtactctatccgttaccgcctaccgcaat
ttccttcgcgaatgcctcttccagaatagaaagcgggtggaaatatggggagcaaaattg
aggaataagtggggcattacgaagaaggcttctcctggaaatcttcaagatgttgaggat
gatttcgccggccagatcgattcatctcccattatccttgctgtgaggatatcagtcaag
ggagaggagcggaatgttggtgtttgttttgcagatgccagtgttcgggagctgggcgtg
agcgagtttgccgataacgacctatactccaatttcgaatctctcatcatccaacttggt
gtcaaagagtgcgttgttcaatcggatgagcagaacaaggattatgaactgggaaaactt
cgaggaattatcgagcgctgtgggatagttatgacctttcggaaggcttccgagttttcg
gtcaaagacatcgagcaagacctctcccgacttcttacaagtgaaattgctgccggtgtc
ttaccacaggtggaaaacaagcttgccatggcagctgcttccgccttgatacgatatcta
cagcttatgagcgacgatcttaactttggccaataccgtctttaccaacacgatcttgcc
cagtatatgaagttggatgcatcagcagttaaagcgcttaacttgatgcctggaccccga
gatggttcaaagaatatgtcgctatacggccttcttaataagtgtaagaccgccataggg
acccggctgctgggccaatggcttaagcaaccgttaatgagtcttgaagaaatcaaaaaa
cggcaatttttggtggaagcgttcgttgaggacactgaactccggcagacgatgcaggag
gagcacttaaagagcataccagatctttaccggctctctaaacgattccaaaaaaacttg
gcaaacttggaagatgttgtcagagcataccaagttgccatcagaatcccggggttcatt
tcaacctttgaaggtgtgatggatgagacgtataaagacccgcttgatctgcgatacaca
accaaactacgggaaatatatggcaacttggaaaagctacaagagctggtcgaaaccact
gtggaccttgatgctcttgataatcacgaattcattatcaagccagaatttagcgatgat
cttaaattggttcgggataagctggataaactgaagagggcaatggacaccgagcaccac
agagtcggaagcgatctgggccaggaggttgacaagaagcttttcatggagaaccataag
acatatgggtggtgtttccgtttgacccgtgccgaggcaggttcaataaggaatcagaag
gaatatagagaaatatcaaccatgaagaatggtgttttctttacgaccactgtcatgcag
gatctgaagcgggattttgataagtcaacgtacatatataacaagacacagagcggacta
gtggatgaagttgtcaccgtagcatcctcctattgcccagttctggaagaattggccgcc
gtgctagcccatctagacgttattgttagtttcgctcacgtttcggttcatgctccatca
ccgtatgtcaagccgaagatgcatgcaagaggagagggaaacactattttgaaggaagcc
cgacatccatgcatggaaatgcaggacgacattcaattcatcacgaacgatgtcagctta
tgcagaggcagctcggagtttttgataatcacaggtcccaacatgggtggtaaatccact
tacatccggcagattggcgtcatcgctctaatggcccaggttggatgcttcgttccatgc
tccgaggcggaattgacgattttcgattgtatacttgctcgcgtcggagccagcgactcg
caaatgaagggtgtgtccacattcatggccgagatgttggagacctcgactatcctcaag
tcggctacttccgagtccctgattatcatcgatgagcttgggcgaggtaccagtacctat
gatgggttcgggcttgcttgggctatctcagaacacattgtcaaggaaattaggtgtttt
gcgatgttcgcaactcattttcacgaattgacggcgctagtcgacgaatacccctccgta
aagaacttgcacgtcattgcacatgtgactttgctttataaagtcgacgaaggcgtttcc
gaccagagcttcggtattcatgtcgcggaacttgttcgcttcccacaaaaggtaatcaac
atggccaagcgtaaagcagacgaactcgaagactttaccggcaaacacgaacagaaggca
tccaactgtaccagagagcagattgcagaggggtcggctctgctaaaaaaggtattggtc
gagtggaaaaacaaggtggaggactcggggatgacccccgctcaaatgaggggtgaactc
ataaaattgatccaagcaccggagcacaaggaagctttggataatgatccattcttccaa
tcagttaaggccctgtag
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