Tuber melanosporum: GSTUM_00006283001
Help
Entry
GSTUM_00006283001 CDS
T01282
Name
(RefSeq) hypothetical protein
KO
K03265
peptide chain release factor subunit 1
Organism
tml
Tuber melanosporum
Pathway
tml03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tml00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
GSTUM_00006283001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tml03019
]
GSTUM_00006283001
03012 Translation factors [BR:
tml03012
]
GSTUM_00006283001
Messenger RNA biogenesis [BR:
tml03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
GSTUM_00006283001
Translation factors [BR:
tml03012
]
Eukaryotic type
Release factors
GSTUM_00006283001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
baeRF_family10
acVLRF1
Ribosomal_L7Ae
Motif
Other DBs
NCBI-GeneID:
9184488
NCBI-ProteinID:
XP_002838502
INRA:
GSTUM_00006283001
UniProt:
D5GDV0
LinkDB
All DBs
AA seq
445 aa
AA seq
DB search
MSLPQANDMEKNIEIWKIKKLIKSLTEARGNGTSMISLIIPPKDQVSRVGKMLSDEYGTA
SNIKSRVNRLSVLSAITSTQQRLKLYHKVPPNGLVLYCGEIITNEGKERKINIAFEPFKP
INTSLYLCDNKFHTEALSELLESDSKFGFIVMDGKGALFGTLSGNTREVVHGFSVALPKK
HGRGGQSALRFSRLRDEKRHNYVRKVAESAVQNFITNDKVNVSGLILAGAADFKTDLAQS
ELFDPRLQAKIIKIVDVSYGGDLGFIQAIELAEETLGNVKFVQEKKLISKYFGELAQDTG
KVCYGIDDTLRAMELGAAETVIVFENLDVTRWILKSSDGNLITLHTNKIQEQDRQKFMDK
SSRQEMEIVEQTSFLEWLAEKYHDFGATLEFVSDRSGEGNQFVKGFGGIGALLRYKVNFE
QLHELEDEDEYYDGNFLTVIWSYLR
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgtctctgccccaagcaaacgacatggagaaaaacatcgagatctggaagatcaaaaaa
ttgatcaaaagtcttactgaagcacgcggtaacggaaccagtatgatttccctaatcatt
ccgccaaaggatcaggtctcccgcgtcggcaagatgttgtctgatgagtacggcaccgca
tccaacatcaaatcccgtgtcaatcgtttatcggttctttcagctatcacttctactcag
caacgtctcaagctctaccacaaggttccccccaacgggctcgtcctctactgtggcgaa
atcatcaccaacgaaggcaaagagcgtaaaatcaatattgcctttgagcccttcaagcca
atcaacacctctttgtacctctgcgataacaaattccacactgaggcactatcggagctt
ttggagtctgactctaagtttggctttatcgtgatggacggtaaaggtgctttgtttgga
actttgagtggaaacactagagaagtcgttcacgggttctctgttgcccttcccaagaag
catggtcgtggtgggcagtccgcattgcgtttctcacgactcagagacgaaaaacgccac
aattacgtccgcaaggtagcggagtcggccgtgcaaaactttattaccaatgacaaggtc
aacgtttcaggtctaatccttgctggagctgccgacttcaagaccgaccttgcccagagt
gaactctttgatccacgcttgcaagcaaagattatcaagattgtcgatgtgtcctacggt
ggcgatcttggctttattcaggctatcgagttggccgaagagactttgggcaacgtgaag
tttgtccaagaaaagaagctgatcagcaagtactttggggagctagctcaggatactgga
aaggtttgctatggcatcgatgatacactgagggccatggaattgggtgccgcagagact
gttatcgtctttgaaaaccttgatgtgactcgctggattctcaagagctccgacggtaac
cttattactctccacaccaataaaattcaagagcaggatcgccaaaaattcatggataag
tcttctaggcaagaaatggagattgttgagcaaacctccttccttgagtggctggctgaa
aaatatcacgactttggtgctaccttggagtttgtctccgatcgctccggcgaaggcaat
caatttgtaaagggatttggcggaatcggcgctttgctcaggtacaaggttaactttgag
caattacatgaactcgaggatgaggatgaatactacgatggtaactttctaactgtgatt
tggagttatttgcgctaa
DBGET
integrated database retrieval system
