Tuber melanosporum: GSTUM_00006347001
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Entry
GSTUM_00006347001 CDS
T01282
Name
(RefSeq) hypothetical protein
KO
K08991
crossover junction endonuclease MUS81 [EC:3.1.22.-]
Organism
tml
Tuber melanosporum
Pathway
tml03440
Homologous recombination
tml03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
tml00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
GSTUM_00006347001
03460 Fanconi anemia pathway
GSTUM_00006347001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tml03400
]
GSTUM_00006347001
DNA repair and recombination proteins [BR:
tml03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
GSTUM_00006347001
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ERCC4
HHH_8
WHD_MUS81
EME1-MUS81_C
XRCC4_C
DNA_pol3_a_NI
Motif
Other DBs
NCBI-GeneID:
9183105
NCBI-ProteinID:
XP_002838582
INRA:
GSTUM_00006347001
UniProt:
D5GE30
LinkDB
All DBs
AA seq
748 aa
AA seq
DB search
MADDECANPLLLGFLRDWYDTARQQNSKRVTTYRNAYEAMRVCPIPFQHPSEAIQLKGLG
PVLCERLTQALRIHCEANGLPMPKKAKRRRARDDLDGGESAAGEGSGAAPPPKKRRPTKA
YIPKKRTGAYALLYALYKGDGDMLTKTELIDRARPYCDSSFDAPAEAGKFYTAWASMRTL
ISSNYVYFSGNPKRYMLTEGGEEVGRGILAAEEGLDLGLGDTDGGFGEAAQVGGPTARGG
ATASGSVPSSRSKRTPAVRNTWGGDGSEDSSDVAPSRHRRRADPRHEEDNRPILRRILEE
PEANSRASEDGLELSDCASTLGRNSMPLSQNTGPINDGRRLPVVPSGSQTPSVAPLPRTS
TEIDLTLSPEHPSATVLTQKSKSNANIPAVPHRHKIGNVTSQASSITSVDRGAPTSSRPQ
SRAGSTTASRAASGSRSTFPDFSPEIVKAGSFTVHLLLDNREVRTKNDRDYIQDNLKTCG
INPITRPLQVGDAMWIACERGGRNREIALDHIAERKRLDDLVASIKDGRFHEQKFRLAKS
GLKHVIYIIEDFTLKEADRAMQDAMNTAISSTQVVDGFFVKRTGKLDDTIRYLVRMTKKL
EKEYETKDLSLIPDNLLDSSTYQAFRKHLNEKFPEKQFNINYSIFSTLVSKSASLNLRDV
YLKMLMCVRGISLDKALQIQKAYPTPIELVEAYERCASEDEMKEMIMKQSASALGRKKVG
PAVSAKVAEVWTGVGAQADPDEEAEDSD
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgatgaatgcgccaatccgctccttcttgggtttctgagggactggtatgat
actgcaaggcaacaaaactccaagagagttactacctacagaaatgcctacgaagctatg
agggtatgtccgataccctttcagcatcctagtgaagcgatccaactcaaaggccttggg
ccagttctctgcgagaggctaacacaagctctgcgaatccattgcgaggccaatggtctc
ccgatgccgaaaaaggcaaaacggcgtcgcgctcgtgatgacttggacggaggggagagc
gccgctggggaaggatcaggagctgccccgccaccgaagaaaagacggccaaccaaagcc
tacattcccaagaaacgcaccggcgcatatgcgctcctatacgctctttacaagggtgat
ggagatatgctgactaaaacggagctcatcgaccgagcgagaccgtactgtgattcgtct
ttcgatgctccggccgaggcgggaaagttttacactgcctgggcctccatgaggactctc
ataagcagcaactatgtgtatttcagtggtaacccgaagaggtatatgttgacagaagga
ggggaggaggtcgggagggggattctggctgccgaagagggcttggatctaggtcttggg
gacaccgatggcggttttggggaggcagcccaagttggaggtcccacagctagagggggt
gcgaccgcttcaggtagcgttcctagttcgaggtcgaagagaacccctgccgtgcgtaat
acctggggcggagatggaagtgaggatagcagtgatgtagccccatcacgtcaccgacgc
cgggctgacccgagacatgaggaggataatagacctatcttgcgaagaatattagaagag
ccagaagctaattctagggcatctgaggatggccttgagctcagtgattgtgcaagcaca
cttgggaggaattccatgccgctttcccagaacaccggaccaatcaatgatgggagacgc
ttgccagtagttccgtcgggatctcagacgccatccgtagctccgttgcctcgcacttcc
accgaaatcgacttgacgctctccccggagcacccttcagctactgtcctgacacagaag
agcaagtcgaacgccaatattccagctgtcccgcataggcacaagattggaaatgtcacg
tcccaagcgtcgtcaattacatcggtcgatcgcggtgcacccacatcatcacggccgcaa
tctcgtgcgggatctacgactgcctctcgtgctgcctctggcagtaggtccacatttcct
gacttctcacccgaaatagtgaaggcaggatcgttcactgttcatttgctcctggacaac
cgggaggtccgtacgaaaaatgaccgcgactatattcaagataatcttaagacttgcggc
ataaacccaatcacccgaccactccaagttggcgatgcaatgtggattgcctgcgagagg
ggtggtcgtaatcgtgaaattgctttggatcacattgccgagcggaaaagacttgacgac
ctagttgcttctatcaaagatgggcggttccacgagcagaagttccggttagcgaagagt
ggtttgaaacatgtgatttacattatcgaggatttcacacttaaagaggccgatagagca
atgcaagacgctatgaatactgcgatcagttctacacaggttgtcgacggatttttcgtc
aagaggacaggcaaactggatgacactatacgatacctagtcagaatgacgaagaagtta
gaaaaggagtacgagaccaaggatttgagcctgatcccagacaatctccttgactcgagc
acataccaagcctttcgcaagcacctgaatgagaaattccccgaaaaacagttcaacata
aattactctattttctcaaccttagtctctaagagcgccagcctgaacctcagagacgta
tacctgaaaatgcttatgtgtgttcggggcattagcttagacaaggcgctccagattcaa
aaggcgtatcccacccccatcgaactggtcgaggcttatgagcggtgtgcgagtgaggat
gagatgaaggagatgatcatgaagcagtccgcaagcgctcttggaaggaaaaaggtcgga
ccggctgtctcggcaaaggtggcagaggtatggactggggttggggcccaagcggatcct
gatgaggaggctgaagatagtgattag
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integrated database retrieval system
