KEGG   Tuber melanosporum: GSTUM_00006352001
Entry
GSTUM_00006352001 CDS       T01282                                 
Name
(RefSeq) hypothetical protein
  KO
K12816  pre-mRNA-processing factor 17
Organism
tml  Tuber melanosporum
Pathway
tml03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tml00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    GSTUM_00006352001
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:tml03041]
    GSTUM_00006352001
Spliceosome [BR:tml03041]
 Complex C
  Other components
   Step II factors
    GSTUM_00006352001
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_CDC20-Fz EIF3I Beta-prop_EML_2 WD40_WDHD1_1st WDR55 WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd Beta-prop_EML Beta-prop_WDR75_1st Beta-prop_RIG_2nd ANAPC4_WD40 Beta-prop_EIPR1 Beta-prop_TEP1_C WD40_RFWD3 Beta-prop_SCAP Beta-prop_SPT8 Beta-prop_IFT122_1st WD40_MABP1-WDR62_1st Beta-prop_DCAF4 Beta-prop_Vps41 Beta-prop_NWD2_C WDR90_beta-prop_4th Beta-prop_WDR75_2nd
Other DBs
NCBI-GeneID: 9183107
NCBI-ProteinID: XP_002838584
INRA: GSTUM_00006352001
UniProt: D5GE32
LinkDB
AA seq 576 aa
MVLVNYASSDDEEAGPSSSGISNLAITSSTKVIAAPDVSLEDPMQLRQSLIKSTDKKITT
NMTYDQLSAPVVGPSNPFLSAENASRKRKNVLTGYAEESAISDSTFRTQQRTFISLGYAK
DPSLVANGNSFVGNQDSVVLHGGKDVVQLRPSRQETDAIKRKRTKKGDPSILEGENAYVG
PWAKYNEANTLSESEDEDEEEEGEEEYSAPTSNPIVDKAGKEYLDVNTGGIGKETTEFHG
SQLRDYQGRTYMHVPQDLDIDLKKEPGSWTNYIPKKLVHTWKGHTKPITALRFFPGSGHL
LLSSSSDAKAKIWDVYHDRELLRTYNGHSKAVTDITFNNSGSQFLTASYDRYMKLWDTET
GKCLHRFTTGKIPHVIRFNPDPALHHEFVAGMSDKKIIQFDTRTEQVVQEYDHHLGPVNT
ITFVDENRRFITTSDDKSLRAWEYGIPVPIKFIAEPYMYSMVRASLHPSGKYVAYQSGDN
QVVVYAATDKFRQNRKKAFRGHNNAGYAIDVDISPDGQFLMSGDSGGFLCFWDWKTCKMY
HKFQASDGPVVAAQWHPQESSKVASAGLDNVIKFWD
NT seq 1731 nt   +upstreamnt  +downstreamnt
atggtacttgtaaactacgcttcgagtgatgatgaggaagctggcccctcgtcaagcgga
atctccaatctcgccataacctcgtcgacaaaagttattgccgcccccgatgtctccctg
gaagaccctatgcagctccgccagtccctaataaagtcgacagacaaaaagattacaaca
aacatgacctatgaccagctttccgcaccagtggtcggcccctcaaacccttttctatcc
gccgagaacgcatcgcgaaaacgcaaaaacgtactcacagggtacgccgaagagtcggca
atctctgactctactttccgtacacagcagcggacatttatatccttggggtacgcgaag
gatccctccctcgtagccaacggaaactcttttgttgggaatcaggacagtgttgtttta
cacgggggcaaagacgtagtccaactacgaccctcgcggcaagaaaccgacgcgatcaaa
cggaagaggacgaaaaaaggggatccgtcgattctcgagggggaaaacgcctacgtgggt
ccctgggcgaagtacaatgaagctaatacgctgtcggagtctgaggatgaggatgaggaa
gaagagggtgaagaggagtattctgcgcctacgtcaaaccctattgtcgataaggccggc
aaggagtatctggatgtgaacactggaggcattgggaaggagaccacggagttccatgga
tcgcagttgcgggattatcagggaaggacgtacatgcacgttcctcaggacctagatatc
gatttgaaaaaggagcctggaagctggacaaattatatcccgaaaaagttggtgcatact
tggaagggacacacaaagcctatcactgcattgcgatttttcccgggaagcggccatctg
ttgttgtctagcagtagtgatgccaaagccaaaatttgggatgtctaccatgatcgtgag
cttctccgcacatacaacggccactcaaaggctgtcacagatatcaccttcaacaactct
ggtagtcaattcttaacagcttcgtacgaccgctacatgaaactctgggatacggaaact
ggaaaatgtcttcatcgtttcacaactggcaagataccgcatgtcatccggtttaatcct
gaccccgctctccaccacgaattcgttgcaggcatgagtgacaaaaaaatcatccaattc
gacacccgcacagagcaagtagtccaggaatacgaccaccatctcggccccgtaaacact
atcaccttcgtggatgaaaaccgccgtttcatcacaacctcggatgacaagtcgctgcgg
gcctgggaatacggcatcccagtccctatcaaattcatcgcggagccttacatgtactcc
atggtccgtgcctcgcttcatccctcgggcaagtatgtcgcgtaccagtccggcgacaat
caagtcgtagtttacgccgcgacggataaattccgccagaaccgtaagaaggccttccgc
ggacacaacaatgccgggtacgccattgatgtagacatttcccctgatggtcaattcctc
atgagtggggattctggcgggttcttgtgcttttgggattggaagacttgtaaaatgtat
cacaagtttcaggctagcgatgggccggttgtcgcggcccagtggcatccgcaggagagc
agcaaggttgctagtgccggactggataatgttattaagttctgggattag

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