Tuber melanosporum: GSTUM_00006380001
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Entry
GSTUM_00006380001 CDS
T01282
Name
(RefSeq) hypothetical protein
KO
K14571
ribosome biogenesis ATPase
Organism
tml
Tuber melanosporum
Pathway
tml03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
tml00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
GSTUM_00006380001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tml03009
]
GSTUM_00006380001
Ribosome biogenesis [BR:
tml03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
GSTUM_00006380001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
RuvB_N
AAA_16
AAA_5
AAA_22
AAA_2
AAA_33
TIP49
AAA_14
Vps4_C
RNA_helicase
Mg_chelatase
AAA_28
nSTAND3
NPHP3_N
ABC_tran
AAA_17
IstB_IS21
AAA_3
NACHT
AAA_18
AAA_7
Sigma54_activat
Parvo_NS1
Zeta_toxin
AFG1_ATPase
DUF815
Cytidylate_kin2
Mito_fiss_reg
Motif
Other DBs
NCBI-GeneID:
9183125
NCBI-ProteinID:
XP_002838602
INRA:
GSTUM_00006380001
UniProt:
D5GE50
LinkDB
All DBs
AA seq
747 aa
AA seq
DB search
MAGNRQSLTKGLERKVLAIVRRYIDELSVAGEKNGPLRLSVSQVFQYVITDESVPRQKKQ
NLEKMIEKALDTIRDEEAEADSLDSDLSEFEELNEEGFMEPKESNTMNKRVVNMWSTSTS
STTTPKPPPPIPEIPPPIASNTVPESPAPRKRKGRQPVKDSESAKRQKQDDSREPPKNIS
LKDIGGLEDVINDLLELIAMPLTHPEVYLHTGVQPPRGVLLHGPPGCGKTMLANAVAGEI
GLPFIAISAPSIVSGMSGESEKKLRELFEEAREKAPCLIFMDEIDAITPKRESAQREMER
RIVAQMLTCMDDLTLEKTSGKPVMIIGATNRPDSLDPALRRAGRFDREICLNVPDEVGRE
KILRVLCQKLRLSGDFDFKRLAKTTPGFVGADLNALTAEAGAVAMRRIYETLIIPPATID
TLETKIQLDSLHITLPDFLTALPKIQPSSKREGFATVPDVTWADIGALESLRVEMQMAIV
QPIKRPELFARVGVTAPAGVLLWGPPGCGKTLLAKAVANESRANFISIRGPELLNKYVGE
SERAVRQVFTRARASIPCVIFFDELDALVPRRNDSLSESSSRVVNTLLTELDGLNDRKGI
YVIGATNRPDVIDPAMLRPGRLDKPLFVDLPNTGERVEILKIITKNTPLSNVDLGAIAVD
NRCKNFSGADLAALVREAAVLALRHACFTDVAEVEEGKNADNLEVMVTMEDFEKAFVNIR
PSVSEDDREQYQELATRFGWGKTVLAK
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atggctggcaacaggcagtccttaactaaaggacttgaacgaaaggttcttgctatagtt
cggaggtatattgatgaactatcagtcgccggagaaaaaaatggccctctacgtttgtcg
gtctcgcaggtttttcaatatgttattacagatgagagtgtgccaaggcagaagaaacag
aatttggaaaagatgattgaaaaagccttagacacaatacgggatgaggaggccgaagcc
gatagtctagacagtgacttgagcgagttcgaggaactcaatgaagagggcttcatggaa
ccaaaggaatcaaacacaatgaacaagcgagtagtaaatatgtggtcaacaagcacatca
agcacgacaactcccaaacctcccccgccaattccggaaatccctccccccatagccagc
aataccgtaccagaatcgccagcaccccgaaaacgaaagggacgccagccggtcaaagat
agcgaatctgcgaaacgtcagaaacaagacgactctcgcgagccacccaagaacatctcc
ctgaaggacattggcggcttagaagatgtcattaacgatcttttagagcttatcgccatg
cctctaacccacccggaggtttacctacataccggagtgcagccgcctcgtggtgtacta
ctccatggaccacccggttgcggtaaaactatgctagcaaatgctgttgccggagagatt
gggttaccatttattgctatttctgcaccctcaattgtgtcaggaatgtctggagaatcg
gaaaagaagttacgggaacttttcgaggaagctcgggagaaagccccttgcttaatattt
atggatgaaatagatgctataacaccaaagagggagagcgcccagagagaaatggagaga
agaattgttgcccagatgttgacctgcatggacgatcttacattggagaagactagcggg
aaacctgtcatgattattggtgcaacaaatcgacctgacagcctggatccggcgctgaga
agagcgggaagatttgatagggaaatttgccttaacgtgccagatgaggttggaagagag
aagatactgagggtattgtgtcaaaagttgaggttatcaggagattttgacttcaaaaga
ttggccaaaacaacccccgggtttgtcggagctgacctaaatgctttgacagcagaggcc
ggcgcggtagcaatgagacgaatatacgaaactcttataatcccacccgccaccatagac
actttagagacaaaaatccaactagattcactccatataaccctcccagatttcttaaca
gcccttccgaaaattcagccttcgtctaaaagagagggttttgcaactgtccccgatgtt
acttgggcagatattggggcgcttgagtcacttagggttgaaatgcagatggccatcgtg
caaccaatcaagaggccggaactttttgctcgcgttggggttaccgcgccggctggggta
ctcctttggggccccccagggtgcggcaagaccctgctggcaaaagccgttgcgaatgag
agtagggcaaatttcatcagcatccggggtccggaattactaaacaagtacgttggagaa
tccgagcgggctgtccgccaagttttcacacgagctcgagcctctattccgtgcgttatc
ttttttgatgagttggatgctttagttccccgtcgcaatgacagtctttcggagtcctcc
tcccgtgtagtcaataccctccttacagaactggacggcctaaatgatcgcaagggaatc
tatgtcatcggtgcaaccaatagacccgatgtcattgatccagcaatgctcagaccggga
aggttggataagcctttattcgtagacctcccaaacacgggggagagagtagagattttg
aagattatcaccaaaaatacaccactctccaacgttgatctaggggctattgcagtggat
aacaggtgcaaaaatttcagtggcgcggatctagcggcactcgtgagagaggccgcagtt
ctggctcttcgacatgcctgcttcacagacgttgctgaagttgaagaaggcaaaaatgct
gacaacctcgaagtaatggtcacaatggaggatttcgaaaaagcgttcgtaaacatcagg
ccttcggtgtcagaggacgacagagagcagtatcaggagttggcaactagatttggttgg
ggaaagaccgtactagcaaaatag
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