KEGG   Tuber melanosporum: GSTUM_00006428001
Entry
GSTUM_00006428001 CDS       T01282                                 
Name
(RefSeq) hypothetical protein
  KO
K14299  nucleoporin SEH1
Organism
tml  Tuber melanosporum
Pathway
tml03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:tml00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    GSTUM_00006428001
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tml03019]
    GSTUM_00006428001
   04131 Membrane trafficking [BR:tml04131]
    GSTUM_00006428001
Messenger RNA biogenesis [BR:tml03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     GSTUM_00006428001
Membrane trafficking [BR:tml04131]
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    GSTUM_00006428001
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 WD40_WDHD1_1st ANAPC4_WD40 WDR55 Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_RIG_2nd Beta-prop_WDR35_TULP_N Beta-prop_IFT140_1st EIF3I Beta-prop_EIPR1 Beta-prop_TEP1_C Beta-prop_IFT122_1st Beta-prop_WDR75_1st NBCH_WD40 Beta-prop_IP5PC_F
Other DBs
NCBI-GeneID: 9185486
NCBI-ProteinID: XP_002838639
INRA: GSTUM_00006428001
UniProt: D5GE87
LinkDB
AA seq 336 aa
MPNSAAQSYTTFSTGHDDLVHDVAYDYYGRRMATVSSDQKLKVFDLSDDGEWVLSESIRA
HEASITRVIWGPPEHGQIIATCSYDRMVRIWEEQEMGSTLRWKRQFQMTSEKRTAIYDIS
FPPATASTASGTSTGLKIAFISTDGIIHIYECREPQDLTHWIPMEAIDTLPTPPMKEIEV
SFCIDFCPSRWSGEQLVVGAMDKVQVYRVGHDTVRLRPVEELKGHRGLVRDVSWAAGMGR
SYHLIATGCKDGHVRIFKLTASPGHLSEGWSVELIADFDDHHSDVWRVSWNATGTVLSSA
GDDGTIRLWKAAFSGEFQCLSVIASQRSGYALAEVF
NT seq 1011 nt   +upstreamnt  +downstreamnt
atgccaaattctgctgcgcaatcatatactaccttctcaactggccatgacgatttggtt
catgatgtagcatacgattactatggaagacgaatggctacagtttcttcggatcagaaa
ttgaaggtttttgatctaagcgatgacggggaatgggttctcagcgaatccatccgagct
cacgaggctagcattacgagggtcatctggggacctcccgagcacggtcaaataattgca
acatgttcttacgaccggatggtgagaatatgggaggagcaggaaatgggatccacactc
cgctggaaacgccaattccaaatgacatccgagaagcgcacagcgatctacgacatatcc
tttccgccggccacggcgagcaccgcgtccggcacctcgacgggtctgaaaatagcattc
atatcaaccgacgggataatccacatctacgaatgtcgagaaccccaagacttaacgcac
tggataccaatggaggccatagacacactccctacaccaccgatgaaagagatcgaagtt
tccttctgcattgacttctgcccctctcgctggagcggcgagcagcttgtcgtcggcgca
atggacaaagtccaagtataccgggtgggccacgacaccgtcagactccgaccagttgaa
gaactgaagggacatagaggcctggttagggatgtaagctgggccgcaggaatgggcagg
agctatcacctcatagcaacaggctgcaaagacggccacgtccgtattttcaaacttacc
gcctcacctggccacctcagcgagggttggtcggtagagctgatcgcagactttgacgac
caccacagcgacgtttggagagtctcttggaatgctacgggaacggtcctttccagcgct
ggtgacgacggcaccattcgcctctggaaagcggcgttctcgggggagtttcaatgtctt
tctgttattgcatcgcagagatctgggtatgcgcttgctgaagtcttttga

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