Tuber melanosporum: GSTUM_00006514001
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Entry
GSTUM_00006514001 CDS
T01282
Name
(RefSeq) hypothetical protein
KO
K10839
UV excision repair protein RAD23
Organism
tml
Tuber melanosporum
Pathway
tml03420
Nucleotide excision repair
tml04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
tml00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
GSTUM_00006514001
09124 Replication and repair
03420 Nucleotide excision repair
GSTUM_00006514001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
tml03051
]
GSTUM_00006514001
03400 DNA repair and recombination proteins [BR:
tml03400
]
GSTUM_00006514001
Proteasome [BR:
tml03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
GSTUM_00006514001
DNA repair and recombination proteins [BR:
tml03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
GSTUM_00006514001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
XPC-binding
UBA
ubiquitin
Rad60-SLD
UBA_7
Rad60-SLD_2
Plexin_RBD
Ubiquitin_2
Dsc3_N
Ubiquitin_5
Motif
Other DBs
NCBI-GeneID:
9181565
NCBI-ProteinID:
XP_002838743
INRA:
GSTUM_00006514001
UniProt:
D5GEJ1
LinkDB
All DBs
AA seq
385 aa
AA seq
DB search
MKLTFKDLKQQKFVIDAEPTDTISQVKEKINKEKGWDAAAQKLIYSGKILQDDKTVGDYK
IEEKGFVVCMISNKPKAASSSSAAGSSSASTPVKAPSTPAQSSVPPTPSAPAQAVTGSST
STSAAVPETPTPAGAVGTTFNDPEDAIVNMMGMGFERSEIERAMRAAFFNPDRAVDYLLN
GIPEHLTQERPAQSSTTRPAAQSAQSAARPAAATAPATGGSASGEGAEPENINLFEAAAA
AASQRGGAHSQGRSGGAASLGNLDFLRNNPQFQQLRQVVQQQPQMLEPILQQVGMGNPQL
AATISSNPEAFLRLLSEDPADEDGGALPPGSNHISVTPEESDAIERLCRLGFDRDMVIQA
YFACDKNEELAANFLFEQPDDDMDG
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgaagcttacttttaaggatctcaagcagcaaaagtttgttattgatgctgaacctacc
gatacgatttcccaggtgaaggaaaagattaacaaagagaagggatgggacgccgcggct
caaaagctcatctactctggtaaaatcttgcaagatgacaaaaccgttggggactacaaa
attgaagaaaaaggatttgtggtttgcatgatatcaaataaacctaaagctgcatcctcg
tcttccgctgctggttctagttcggcttccaccccggtgaaggcaccatcaacaccagcc
caaagttccgtcccccccactccatctgctccagctcaggctgtgacaggttcctcaacc
tcaacctcagccgctgtgccagagacaccaactcctgctggcgccgtcggtactaccttc
aatgatccggaggacgctattgtcaatatgatgggaatgggcttcgagaggagcgagatt
gagagagccatgcgcgctgcgtttttcaatccagatagagctgttgactaccttctgaat
ggtatccccgaacacctcacacaagaacggccggctcagtcttctaccacacgcccagcc
gcgcaatcggcccaatctgctgctagacctgctgctgctactgctcctgccactggtggt
agcgcatctggagaaggggctgaacctgaaaatatcaacctgttcgaagctgctgccgcc
gccgctagccagcgtggaggtgcgcatagtcagggaagatctggaggcgctgctagcctc
gggaaccttgactttctcagaaacaatccccagtttcaacaattgcgtcaagtcgttcaa
caacagccacagatgctcgagccaatcttgcaacaagtcggcatggggaatccacaactt
gcagcaacgatcagttcgaaccccgaggctttcctgcgcctgctcagtgaggatccggct
gatgaggatggtggggcattgcctccgggctccaaccacatttcagttactcctgaagag
agtgatgctattgagagattatgtcgtctcggttttgatagagacatggtcattcaagcg
tacttcgcttgcgacaaaaacgaagagctcgcagccaactttttgttcgagcaacccgat
gatgacatggatggctaa
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