Tuber melanosporum: GSTUM_00006526001
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Entry
GSTUM_00006526001 CDS
T01282
Name
(RefSeq) hypothetical protein
KO
K15176
RNA polymerase-associated protein CTR9
Organism
tml
Tuber melanosporum
Brite
KEGG Orthology (KO) [BR:
tml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tml03021
]
GSTUM_00006526001
Transcription machinery [BR:
tml03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
GSTUM_00006526001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_19
TPR_16
TPR_11
TPR_8
TPR_14
TPR_12
TPR_CcmH_CycH
TPR_6
TPR_7
TPR_Slam
ARM_TT21_5th
ANAPC3
TOM20_plant
ARM_TT21_2nd
MIT
TPR_10
PGK
HAT_PRP39_C
Motif
Other DBs
NCBI-GeneID:
9181571
NCBI-ProteinID:
XP_002838750
INRA:
GSTUM_00006526001
UniProt:
D5GEJ8
LinkDB
All DBs
AA seq
1181 aa
AA seq
DB search
MASSLAFPNGHGVIGLSPRARFSDIPRSIDIPVSAGDEDEDDENAVVEVDPDALPEDPTE
LCTLLENERSPKQYWMYIALAYAKHDKVDIAIEIITKGLQAKTHEPMAERLPMLHLLTWL
YLERSREAAKNVAEGSALISEAKTKDHYLQLATQILNESSRLDPASTLVTLARGVYSVFK
ASVGTVDKNTHMDNAAKIFDDAVRTSRATNMLAIMGRARVLYGKGRYERALESYQEVLTK
RPDMDPDPRIGIGLCCWHLGHKDDALVAWERALELDPNSKYAHILKALYHLHVTSNLSEY
DPEFINNYRLVIEHTQKAFKLDKQFPLACTTFASHFFIKKGYSQCELLAKKAIEYSDVAA
VTADGWFSLARKAHVEGEYEKALGHYKRSDALREGYLPVKLGIGQVQILMKDLGAAKYTF
EAIVQVNPKCIEARSILGTLYADEVLSAIPRTGFSASKEDVTVLHRKAISLLENVRFTWK
AEAKKNDAHHETILLSLARLYENDQPERALQCLLQVEEIYKYLIDNGDDVMIPLQLTNNI
ATLYWQKGEYNTARTYYQNALNAIPELKEKDDAADTDALATTLTYNLARCEEAAGNIEEA
VKNYEKLLAYHDDYVDANMRLAYLALRRGAEDGHRRIQKLMQTDGNNLEVRALYGWYLGR
QKRKHPIVISDDPEQRHYKHTLQNHEKHDRYSLIGMGNIYLLAARDIKKENEQEREKRRK
LYEKAVEFFDKALQLDPKNAYAAQGIAIASVEDRKDLKTAISMFSKVKETLSKDAHSLVN
FGHCLAGLDQWARAIENYESALTKFQLAKDPTTLTCLGKAYFSKGRKERTTEPEKSMESF
KNALDYAKRALAIAPDNVMYMFNVAYVQFQIVQFIMSLPETSRSLEDLEAASKGLEEGIQ
SFSDIARSNNPPYPSSEIEARSTMGKNTFRKQMERAIQKQREYEEKNQAKLAEARRKREE
DLRRKREAKEAEEREIEKRNKAIADQRKKMQEEAREFAERKAEEERIREENSDGEKKRKR
SSAAGSKSRSTRKRGSKKDGTIDSDSTSEPSRRRSKSKSAITDDDEQKPARKRKKLTRRA
SPTNKGKFKSSEVVNPSDDEDDDDDIPAPPLVPLPEASEEGGKKRKRKPARAIDSGDDED
LEDVNEDLFGDDPSKTIGGSKDGEDVEMRDRAPTPGVDDED
NT seq
3546 nt
NT seq
+upstream
nt +downstream
nt
atggctagctcattagcctttccgaacggccatggagtcatagggctatctcctcgcgcg
cgcttctccgacattccgcgaagtatcgatattccagtgtccgccggagacgaagacgag
gatgatgagaacgccgttgtggaagtggaccctgacgcgctccccgaggatccgacggag
ctgtgtactcttcttgagaatgaaagatcccctaaacagtattggatgtatatcgctctt
gcatatgcgaaacacgacaaagttgatattgcgattgaaataattactaaagggttacaa
gccaaaacccacgaaccaatggctgagagattgccaatgctccatctcctcacatggctg
tatctggagcgcagccgtgaagctgcgaaaaacgtggctgaagggtctgctttgatctct
gaggcaaaaacgaaggatcactatcttcagcttgcgactcaaatactcaacgagtcctca
cgcctggaccctgcttcaacattggtcactcttgcccgtggtgtatactctgtattcaag
gcatccgttggtacagtagataaaaacacccatatggacaatgcggcaaaaatatttgat
gatgccgttcgaacttcacgggcgaccaatatgcttgcgattatgggaagagcgagagtt
ttgtatggaaaagggagatatgagagagcactcgaatcgtatcaggaggtattgaccaag
aggccggatatggatcctgatccgaggataggaatcggattgtgctgttggcacttgggg
cacaaggacgacgccttggtggcatgggagcgtgcgctggagttggaccccaattccaaa
tatgctcatatactaaaggcgttataccatcttcatgtcacctcaaatttgtcagaatac
gaccctgaattcatcaacaattaccgtttggtgattgagcatacccagaaggcatttaaa
ctcgacaagcaattcccactagcgtgcacaacatttgccagccatttctttatcaagaaa
ggatattcgcagtgtgagcttctagctaagaaagctatcgagtatagtgatgttgcagct
gttacggctgacggatggttttcactcgcaagaaaagcacatgtcgagggagaatatgag
aaagcattaggacattacaagaggagtgatgcattacgggaaggatatctcccggtaaag
ctcgggattggacaagtccagatcctgatgaaagaccttggcgcagcgaagtacaccttc
gaggccattgttcaggtaaatccaaagtgcattgaggcaagatcgatactggggactctc
tatgcagatgaggttctctccgccatcccacgaaccggcttctctgcttcaaaagaagat
gttacagttctacatagaaaggctatcagtcttcttgagaatgttcgattcacatggaag
gcagaggctaaaaagaatgacgcccatcacgaaaccatcctcttgtctctagcacggctt
tacgaaaacgaccagcccgagcgagcactccaatgcttactgcaagtcgaagagatatat
aaatatttgatagataatggagatgatgttatgatacctcttcagttgacaaataacatt
gcaaccctctactggcaaaagggcgaatacaacacagctcggacgtattatcagaatgct
ctgaacgcaattccagagctaaaagaaaaggacgacgctgccgatactgatgctctcgct
accacactgacctacaatttagcccgatgtgaagaagctgctggcaatatcgaggaggca
gtcaagaactacgagaagctcttggcctatcacgatgactatgttgacgcgaatatgcgg
ttggcttatttggcccttcgacgtggtgcagaggatggtcataggaggatccagaagtta
atgcagacagacggaaacaatctcgaggttcgagcattatacggttggtatctcggacgc
caaaagcgcaagcatccgattgttatctcggatgatccggagcagaggcattacaagcat
actcttcagaaccacgaaaaacacgaccgttattccctcattggaatgggcaatatctac
cttcttgctgcgcgggatatcaaaaaggaaaacgagcaggagagggagaagcggagaaag
ctttacgagaaggctgtcgagttctttgataaggctttgcaattagatccaaaaaatgcg
tacgcagcccaagggatagcaattgcttctgtcgaagatcggaaggatctcaaaaccgcc
atcagcatgttctccaaagtcaaagagaccctctcgaaagatgcgcactcactagtcaac
tttggacattgtcttgctggattggatcagtgggccagagccatcgagaactacgagtcg
gctctcacaaagtttcaattggctaaagacccaaccacattgacttgcctcggaaaagca
tacttctccaagggtcggaaggaacgaacgactgaacctgagaagtctatggaaagcttc
aagaacgctcttgattacgctaagcgagctctggcgatagcaccggataacgtgatgtac
atgttcaatgtagcatatgtacaattccagattgtccaattcatcatgagcttgccggaa
acttcacgcagccttgaagatcttgaggctgcttctaaaggactggaagagggaatacaa
tctttctcagatatcgcacggtccaacaaccccccatacccatcctcagaaatcgaggca
cggtccaccatgggcaagaacactttccgcaagcaaatggaaagagcaattcagaagcaa
cgtgagtacgaagagaagaaccaagccaaattggccgaagcaaggcgcaagcgcgaggaa
gacctccgacgcaaaagggaagccaaagaagcagaagaacgcgagatcgagaagcgtaac
aaagctatagcagatcagcgcaagaagatgcaagaagaagcaagagaattcgcagagagg
aaggcagaagaagaacgcatccgcgaggagaactctgatggcgagaagaaacggaagaga
tcgtcagctgctgggtcaaagtctagatctacccgcaaacgcggtagtaagaaggacgga
acaatagactccgactccacctccgaaccttctcgtcgcaggagcaagtcgaagtctgcc
atcacagacgacgacgaacagaagccagctaggaagcgcaaaaagctaacgcgtagagca
tccccaactaataagggcaagttcaagtcttcagaggtggtcaaccccagcgatgacgag
gacgatgacgacgatatccccgccccacctctcgtcccccttcccgaagcttctgaggaa
gggggtaagaagcgtaagcgtaagcctgccagggctattgatagcggagatgatgaggat
ttggaggatgtaaacgaagatttattcggggacgaccctagtaagactatcggggggtct
aaggatggtgaggatgtggagatgcgggacagagctcctactcctggagtcgatgatgag
gattga
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integrated database retrieval system
