Tuber melanosporum: GSTUM_00006553001
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Entry
GSTUM_00006553001 CDS
T01282
Name
(RefSeq) hypothetical protein
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
tml
Tuber melanosporum
Pathway
tml03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tml00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GSTUM_00006553001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tml03019
]
GSTUM_00006553001
Messenger RNA biogenesis [BR:
tml03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
GSTUM_00006553001
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
GSTUM_00006553001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
9181590
NCBI-ProteinID:
XP_002838769
INRA:
GSTUM_00006553001
UniProt:
D5GEL7
LinkDB
All DBs
AA seq
470 aa
AA seq
DB search
MPPTRSNLYTSTLHGPPQQFAPQQQGGHPMGAGGGGGGHVGHNPLLGGDRFGQPPHLLFN
NAQPQSAAAVVRAQQQHQQQQAQAAQLQQQQQAIIGLIGRSGGGVSAAGLGGVVGRAGVG
VGPSGGMAIDVRGPVTTPPERSMIRDVWAQDLDKEMAVLRDLVETYQYVAMDTEFPGIVA
RPIGNFKSKADYHYQTLRCNVDMLKIIQLGITLADENGNLAKIDGSVCTWQFNFKFSLND
DMYAQESIDLLTKSGIDFAKHAEHGIDVYQFGNLLISSGLVMYDDVKWISFHSGYDFGYL
VKIMSCLPLPKEESEFRNLLSKYFPALYDIKFLMKSCRTLKGGLQDIAEEMGVSRVGPQH
QAGSDSLLTGNIFFEMREKFFDGKIDDAKYLGQVWGLNGAGISPPNINGVGTVVYNNGVP
VPSTPTTDRNSQNPPTPGSTTPSQQQQQQQNGQPGTPNQYNLQYGKIGGM
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgcctcctacgcggtcgaatctttacacttctacgctccatggtccgcctcaacagttc
gcgccgcaacaacaaggcgggcatccgatgggtgccggtgggggtgggggtggtcatgta
ggtcataatccgctgttgggtggggataggttcggtcaacctccacatcttttgttcaat
aacgcccagccacaatctgccgctgccgtcgtaagagctcaacaacagcatcaacagcag
caggctcaggctgcgcaattacaacaacagcaacaggccatcattgggcttattgggcgc
agcggcggaggggttagtgctgcaggattgggtggggtggtagggagagcgggggttggt
gttggacctagcggtggaatggccattgatgtgaggggcccggtgaccacgccaccggaa
cgctccatgatcagggacgtttgggctcaggatctggataaggagatggctgtgttgcgg
gatttggtcgaaacataccagtatgttgctatggataccgaattccctggaattgttgca
cgcccgatcggcaactttaaatcaaaggctgattaccattaccagaccctccgttgcaat
gtagacatgctaaagattatccaattgggcatcaccctggccgatgagaatgggaacctt
gctaagatcgatggatcagtttgcacctggcaattcaatttcaagttctctctcaatgac
gacatgtatgcacaggaatctatcgaccttctaaccaagtctggtatcgactttgccaaa
cacgcggagcatggaattgacgtgtatcaattcggcaatctcctcattagctccggctta
gttatgtacgacgacgtcaagtggatttctttccattccggttacgattttggctacctt
gttaagattatgagttgcctccccctccctaaggaggagagtgagttccgtaaccttcta
agcaagtacttcccagcgctttacgatattaaatttcttatgaagagttgtcgcactctc
aaagggggactgcaagacattgcggaagagatgggcgtttcgcgggtcggaccgcagcac
caggctggcagtgacagccttttgactgggaatatctttttcgagatgcgggaaaagttt
tttgatgggaagattgatgatgccaagtatctcggacaagtgtggggccttaatggggcg
ggaatttctccaccaaatatcaacggagtcggaaccgtagtttacaataatggcgtcccc
gtgccgtcaactcccacaaccgaccgaaacagccagaacccgcccaccccaggcagcacg
acccccagccagcagcagcagcaacagcagaatggccaaccagggacccccaaccagtac
aatttgcagtacgggaaaataggaggaatgtaa
DBGET
integrated database retrieval system