KEGG   Tuber melanosporum: GSTUM_00006564001
Entry
GSTUM_00006564001 CDS       T01282                                 
Name
(RefSeq) hypothetical protein
  KO
K05544  tRNA-dihydrouridine synthase 3 [EC:1.3.1.89]
Organism
tml  Tuber melanosporum
Brite
KEGG Orthology (KO) [BR:tml00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:tml03016]
    GSTUM_00006564001
Enzymes [BR:tml01000]
 1. Oxidoreductases
  1.3  Acting on the CH-CH group of donors
   1.3.1  With NAD+ or NADP+ as acceptor
    1.3.1.89  tRNA-dihydrouridine47 synthase [NAD(P)+]
     GSTUM_00006564001
Transfer RNA biogenesis [BR:tml03016]
 Eukaryotic type
  tRNA modification factors
   Dihydorouridine synthases
    GSTUM_00006564001
SSDB
Motif
Pfam: Dus zf-CCCH_DUS3L MukB
Other DBs
NCBI-GeneID: 9184880
NCBI-ProteinID: XP_002838778
INRA: GSTUM_00006564001
UniProt: D5GEM6
LinkDB
AA seq 689 aa
MASPPPSDTCPAAEEVSSPAPKKIKLSDTRDSHAGVADIKPEYLLPKARKAISASADDDA
VGAAHHYHYQEAENGGGGKKRKHERGQNKARKFHFASDEVKLCNSLVMVPREGLLEGTVC
EFALNARPKGQKARQRRKKKEEVEVGKATGEDKIMEGREEEEWVKPDGLSKKCGFSHNLR
EYLKSKRDDSEGVCPVWELRGYCGGGWRCRWVGSHSKEDENGELYMVVDEGKKKMYGEKI
AEERKAKLANSKIINSVSMSLKIRLRKNEFPTKKSEIYAEWEHKEKTTRDGLGYEDKGDA
RASFVDAPVNAAEKRRIYIGKETPLLAPLTTTGNLPFRRLCSRLGAALTYSEMAMSVPLL
QGHKPEWALLRAHASEIPNFGAQICGTKIGTAVRATEVLTTLFPSAASSRHGLSLVDLNC
GCPVDLVYRQGGGSALLDQPSKLIKMLKGMNYVSGETPITCKIRIYDAGDVQAITLHGRS
RQQRYSRDADWTYIAETAALIKDLKRRSDTTADTAIDKEARDKPNVFFVGNGDCYSHVDY
YNSIDQGNVDGVMLARGALIKPWLFEEIQKGQYLDKSATERLDYIREYVRYGLECWGSDE
LGVATTRRFLLEWLSFGCRYVPIGILERLPPRIQDRPPPWKGRNELECLLGGSDYKDWIK
ISEMFLGPCPSDFHFTPKHKVCVITLCLG
NT seq 2070 nt   +upstreamnt  +downstreamnt
atggcatcaccacctccctcggatacctgcccggcggccgaagaagtgtcatcccccgcc
cctaagaagatcaagctctccgacaccagggactctcatgctggcgtcgctgacatcaaa
ccagagtacctcctccccaaggctcggaaagccatatccgcatccgcagatgacgacgca
gtcggggctgcccaccactaccactaccaagaggcagagaatggtggcggagggaaaaaa
cgtaaacacgagcgcggacagaataaagcgaggaagttccatttcgcgagcgatgaagtt
aaactgtgtaacagtcttgttatggttccgcgggagggtctgttagaggggactgtttgt
gaattcgcgttgaatgctcggccgaagggtcagaaggcgaggcagcggcggaagaagaag
gaagaagtcgaggtggggaaggcgacaggagaggataagattatggaggggagggaagag
gaggaatgggtaaagccggatgggttgtcgaaaaagtgcggtttctcacacaatctacgg
gagtatttgaagagcaagcgggatgattccgaaggagtttgtccggtttgggaactaaga
ggatattgcggaggtgggtggagatgtagatgggttgggtcgcattctaaggaagatgag
aatggcgaattatatatggttgttgacgagggaaagaagaagatgtatggagagaagatt
gcagaggaacggaaggcaaagcttgccaattcaaagattattaattctgtctcgatgagc
ctgaagatccggctgaggaagaacgaatttccgactaagaagagcgagatttatgcggaa
tgggaacataaagagaagactacacgggatggtttgggttacgaggacaagggcgatgcc
agagcttcttttgtggatgcacccgtgaatgcggcggagaaaagaagaatatacattgga
aaggaaacgccgttgttggctcccttaacaacaacgggcaaccttcctttccgccgtcta
tgctctcgtcttggtgctgcccttacctactccgaaatggccatgtctgttcccctcctc
cagggccacaagccagagtgggctctattaagggcccatgcctctgaaattccgaatttt
ggtgctcagatttgcggcactaagattggaacggcggttcgggcgacagaagtcttgaca
actttgttcccatcggccgcctcttctcgtcatgggctgtcacttgttgacttgaactgt
ggatgcccagttgaccttgtataccgtcaaggtggaggtagtgcacttctggatcagcca
tccaagttaatcaagatgctcaaaggaatgaattatgtctctggggaaacaccaataacg
tgtaaaattaggatctacgatgctggggatgtccaggctattacgcttcatggcaggagt
cgccagcagcgatactctcgggatgccgactggacgtatattgccgagactgcggcgctg
atcaaagatcttaagcggaggtctgacacaactgccgacacagcgattgataaggaggct
agagataaaccgaatgtcttctttgtaggaaatggtgattgctattctcacgtcgactac
tataattccattgatcaaggcaacgttgatggagtaatgcttgcaaggggagctctgata
aaaccctggctctttgaggaaatccaaaaaggtcagtatttggataagtctgccaccgag
cgcttagactacattcgtgagtacgttcgatacggtcttgaatgctggggcagcgacgaa
ctcggtgttgctactacccgtagattcctcctcgagtggctcagctttggatgcagatat
gtacccattgggattctcgagaggttgcctcctcggattcaggacagacctcccccatgg
aagggaagaaatgaattggagtgcttgcttggtggctcggactataaggattggatcaag
atatctgagatgtttctgggtccttgtccgagtgactttcactttacacctaagcataag
gtttgcgtgataactttatgtcttggttga

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