Tuber melanosporum: GSTUM_00006688001
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Entry
GSTUM_00006688001 CDS
T01282
Name
(RefSeq) hypothetical protein
KO
K14763
H/ACA ribonucleoprotein complex non-core subunit NAF1
Organism
tml
Tuber melanosporum
Brite
KEGG Orthology (KO) [BR:
tml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tml03009
]
GSTUM_00006688001
Ribosome biogenesis [BR:
tml03009
]
Eukaryotic type
Sno RNPs
Box H/ACA snoRNPs
GSTUM_00006688001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Gar1
Motif
Other DBs
NCBI-GeneID:
9188640
NCBI-ProteinID:
XP_002838911
INRA:
GSTUM_00006688001
UniProt:
D5GF09
LinkDB
All DBs
AA seq
630 aa
AA seq
DB search
MHTRLAGPTRNNETDTNEAESVKSHDSIEYSPRLPDPFPSTIPSDTAVNPAAPGPVAPET
DITMKGAEDEGSEGPQRKIKQEEASSELDLNYPPPADATSQTKAPAERVKKPIDPDFLEA
AQENKGNPDSEWQFSSDDEVSDEEALSEVLSADEEDSDEEGCYSPMNAAEMAQLLMREDG
GYENSPSVCTPHRTKNELAEDEAEPDKPNILLTQDMAIKPVGFVKSVVGKLVLIEASDPG
HQRVLGEGSVLALEDRTILGVVDEVLGRVEMPLYTVRFKSPEEIEELGVNVERKVFSVVQ
HSEFVFTQPLKAMKGSDASNLYDEEVPITEQEFSDDEAEAEHKKSLKEARQEKRGDRGSG
RGDSGGGSTRGRYGGGRGWGSREPVPIHIDEPYIPLARPANLQEMYMSPPPPPPSTRGGQ
RGSNRKRGDKGRSRGSHRSKDSFAGRGGRRGSHSQSDYDRPQSSSPVPTFGPQPNQPSPN
FQQPYPYTFPPRWPAPEQQAEFIRLMQGQTSQWPSTHQFPMGPPFSLAPHPQHQQFQQQQ
AVYQTQQQQGSHFAGQSNPQQQQFRNLPTGAYINPAFWGRQGQAPQAQASQAHTNSNPPA
PTQQIPGSAHETATTRTVRESLEILKNLSK
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgcatacgagattagcagggcccaccagaaacaacgaaaccgacaccaacgaagccgaa
tctgtgaaatcccacgactcaattgaatattcacctcgtcttcctgacccttttccttct
acaattcccagtgacaccgcagtaaatcccgcagcacccggaccagtcgcaccagaaacg
gatatcactatgaaaggcgctgaggatgaggggtcggagggtccacagagaaaaattaaa
caagaggaggcatcctccgagttagatcttaactatccacctcccgcagatgcaacgagc
caaacgaaggcaccggccgagagagtgaagaagcctatcgatccagatttccttgaggca
gcgcaagagaacaagggcaatccagattcggagtggcaattctcctcagacgacgaagtc
agtgacgaggaggcattatcagaggtattatcggcagatgaagaggatagcgatgaggaa
gggtgctactctcctatgaatgcggcagagatggcccagctattaatgcgggaggatggc
ggttatgaaaactccccctccgtttgcaccccacaccgcaccaaaaatgagcttgcagag
gatgaggcagaacccgacaagccgaatattttacttacgcaagatatggcaatcaaacct
gtcggttttgtcaaatcggttgtgggaaagttggtccttatcgaggcttctgatccggga
caccaacgggttttgggggaaggttctgtgctggcacttgaagatcgtactatcttggga
gttgtcgatgaagtccttggccgtgttgaaatgccattatacactgtccgattcaagagt
ccggaagagattgaggagcttggtgtaaatgtggagcgcaaggtattcagcgtggtacag
cacagcgaatttgtcttcacacagccattgaaagcgatgaagggcagcgatgcaagcaat
ctctatgatgaggaggttcctattacagagcaagagttttcagatgatgaggcagaagca
gaacataagaaatccttgaaggaagcacggcaagagaaacggggtgaccgtggcagcggc
cgcggtgacagtggtggtggtagcactcgcggcagatatggcggcggccgtggttggggg
tcaagagagccggttccgatccacatagatgagccatacattcctctagctcgtccagca
aatctacaagaaatgtacatgtcgccacccccccctcctcccagtacccgcgggggacag
agaggcagcaaccgcaagagaggcgacaagggcaggagtagaggcagtcaccgcagtaag
gattcttttgctggaagaggcggtcgcagaggtagtcactcccaaagcgactatgacaga
ccccagtcatcctccccggtccccacatttggcccccaaccgaaccaaccatctccaaat
ttccaacaaccctatccctacactttcccaccccggtggccagccccggagcagcaagct
gagttcatccggctcatgcaagggcagactagccaatggcccagcacccaccagttccca
atgggcccgccattctcgttagccccacacccgcaacaccagcaattccagcagcagcaa
gcggtatatcaaactcagcagcagcagggatcacacttcgccggtcaatcaaacccccaa
caacagcaattccgtaatctcccaacgggggcatacattaatccggccttctggggcaga
caaggccaagctccccaggcccaggcctcccaagctcacactaactccaaccccccagca
cccacccagcaaattcccggctcggcacatgaaaccgccaccacgaggaccgttagggag
tcgcttgagatcttgaaaaacttgtccaagtga
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