Tuber melanosporum: GSTUM_00006800001
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Entry
GSTUM_00006800001 CDS
T01282
Name
(RefSeq) hypothetical protein
KO
K14407
cleavage stimulation factor subunit 2
Organism
tml
Tuber melanosporum
Pathway
tml03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tml00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
GSTUM_00006800001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tml03019
]
GSTUM_00006800001
Messenger RNA biogenesis [BR:
tml03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
GSTUM_00006800001
U7-dependent histone pre-mRNA processing factors
GSTUM_00006800001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CSTF2_hinge
RRM_1
CSTF_C
partial_CstF
Motif
Other DBs
NCBI-GeneID:
9188054
NCBI-ProteinID:
XP_002839007
INRA:
GSTUM_00006800001
UniProt:
D5GFA5
LinkDB
All DBs
AA seq
327 aa
AA seq
DB search
MNSDKSPPGLSTGPAYHSLTETQVVEIFSAVGRVICFRLVFDRETGRSKGYGFAEFVDNE
TAASAVRNLDNYEILGRKLRVDYSSHGHIPEAPHSNPFPDLPRGMELPKGLSATEAISRT
MDAIPSAKLGEVLCEMRDLAIKDPVRVTELLRQAPQLSYALFEAMAKMGQVDHAQMGRYL
EPTGSPLCSLSTVHRAFGQENNSKGSSAEARSIISALPSLLAPAPLDRQHSMPTSFPTSP
KMHPFVAQRSNSFNCTSQISTPTHQAPIIEAIHNLQDPNVALLQQVLNIPMDQIEVLPAD
QKQQMIQLRQRLSDGIVGHAAAVRKAI
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgaattctgataaatcacctccagggttgtcaacaggtcccgcctatcacagcctcacc
gagactcaagttgtcgaaatcttctccgctgttggccgggttatctgctttcgtcttgta
tttgatcgtgaaactggtcgttccaaagggtatggcttcgctgaattcgtcgacaacgag
accgcagccagtgctgtccgtaacctggataactacgagattctgggccgcaagttgaga
gttgattactcttcccacggacacattcccgaggccccacattcaaatcccttcccagac
cttccgaggggtatggagctaccaaagggtctttccgcgaccgaagcaatatccaggact
atggatgctattccgtctgcaaagttgggcgaggtgttgtgtgagatgcgcgatcttgct
atcaaggatccggtgagggttacggagctgctcaggcaagctccgcagttgtcatatgct
ctgttcgaagccatggcgaaaatgggccaggtggatcatgcgcagatggggaggtacttg
gagcccacgggttctcccttgtgctccttgtccactgtccatcgtgcttttgggcaagaa
aacaattcgaagggttcctctgcggaggcgagaagtattatctcagcccttccctccctt
cttgctcccgcccccctagaccgccagcatagcatgccgacctctttccctacctcccct
aaaatgcatccgtttgtcgctcagagatcaaattcgttcaactgtacctcccagatctca
acccccactcatcaggcacccatcattgaggccattcataaccttcaagacccaaatgtg
gctctcttgcaacaagtcctgaacattcccatggaccaaattgaagtgttgccagcagat
caaaagcaacagatgatccagctgagacagcgtctgagtgatggaattgtgggccatgct
gctgctgtcagaaaggccatttga
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