Tuber melanosporum: GSTUM_00006992001
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Entry
GSTUM_00006992001 CDS
T01282
Name
(RefSeq) hypothetical protein
KO
K03267
peptide chain release factor subunit 3
Organism
tml
Tuber melanosporum
Pathway
tml03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tml00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
GSTUM_00006992001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tml03019
]
GSTUM_00006992001
03012 Translation factors [BR:
tml03012
]
GSTUM_00006992001
Messenger RNA biogenesis [BR:
tml03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
GSTUM_00006992001
Translation factors [BR:
tml03012
]
Eukaryotic type
Release factors
GSTUM_00006992001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
Motif
Other DBs
NCBI-GeneID:
9188271
NCBI-ProteinID:
XP_002839132
INRA:
GSTUM_00006992001
UniProt:
D5GFN0
LinkDB
All DBs
AA seq
730 aa
AA seq
DB search
MSGNTPNSWEDAAGDDNDLARQAQDQLNLNRPQQQQQGSGFRPSYNAPTFQPGAASFTPG
APAFTPGAGSYGQAGYGAGYGQQYPQYGQYGQYGMQGGYEQYGQQYGNYGGGYGQQAAYG
QQPGQFSGYQQQQQQQQPYRPPHILRQQQQQAAPQAAKKQDSAPASGTSSPTPSKSGTST
PITTTSAAAAPKVLKIGGDAAPKVLKIGGDPAPSHKREPDNKPVSGSGVAANKAVAASLA
GGSGKTSPSPGGPPVGKSSPAPTAAGKAAQLAAEKREADAVARAQEDEIDDSVIEELYGK
EHVNLIFIGHVDAGKSSLGGAILYATGMVDERTMEKYKRDAKEQGRESWYLSWALDLTKE
ERAKGKTVEVGRAYFETEKRRYTVLDAPGHKNYVPNMIGGASQADVGILVISARKGEYET
GFEKGGQTREHAVLARTQGVNKLIVAVNKMDDPTVCWSKERFDECTTKLTQFLKGTGYST
KTDLMFMPLSALTGANLKTRVAEDVCPWYSGPSLLEYLDNMKTLERKLKTPFMMPISGKY
KDMGTVIEGKVESGFIKKNSSLVMMPGKTPLEIVAIYGETEEELPHAQCGDQVRLRVRGI
EEEDVIPGFVLSSPKKPIHCVTAFEAQIHILELKSILTAGFNCVMHVHTTIQEVTFAALL
HKLEKGTGRKSRKPPAFANKGQAIIARLESATGSLFPIERYEDYQQLGRFTLRDQGQTIA
IGKVTKLIVE
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atgtctggaaacacgccaaactcatgggaggatgcggccggggacgacaatgacctggct
cgacaagcacaagatcagttgaacttgaaccgaccgcagcagcagcagcaaggttcggga
tttagaccgtcgtacaatgccccgacattccagcccggtgctgcttcgttcacgcctgga
gctcctgccttcactcctggggccggtagctatggccaggctgggtacggagccggatat
gggcaacaatatcctcagtatgggcagtacggtcagtatggtatgcaaggagggtacgag
caatatggacaacagtacggaaattatggtggtggatatgggcaacaagctgcatacgga
caacagcctggccagttttctggataccagcaacaacagcagcaacaacagccttaccga
ccgccacacattcttcgtcaacaacaacagcaggcagctccacaggctgctaaaaagcag
gactcagcaccagcttccggaacttcttctccaaccccttccaagagcgggacctctacc
cctatcactactacatccgccgccgctgctccaaaggtgctcaagattgggggtgatgca
gctccaaaggttttgaagattggcggagatcctgcaccctcacacaagagggagccggat
aataagccagtttctggctccggtgttgctgctaataaggccgttgctgcttccctagct
ggaggaagtggaaagacgagcccaagccctggtggacctcctgttgggaagtcatcccct
gccccaactgccgcagggaaggcggcccagctagctgcggaaaagcgagaagcggatgct
gtggcaagggcgcaagaggacgaaatcgatgactctgttattgaggagctttacgggaag
gaacacgtaaatctcatctttattggtcacgtcgatgctggaaaatcatctcttggaggg
gcaattctatacgccacagggatggtggatgagcgcactatggaaaaatataagcgtgac
gccaaagaacagggtcgtgaatcatggtatctctcatgggccctcgatttgacaaaggag
gaacgcgcaaagggcaaaactgttgaagttgggcgtgcatatttcgagaccgagaagcga
cgatatactgtccttgacgccccaggtcacaagaattatgttcctaacatgattggtggc
gcttcacaggccgatgttggaatattggtcatttctgctagaaagggagagtatgagaca
ggattcgagaaaggaggacaaactagagaacacgcggttttggccagaacccagggtgta
aacaaattaatcgtagcggttaataagatggacgacccaaccgtctgctggagcaaggaa
cgctttgatgaatgcacgaccaagctcacacaattcctcaagggaacaggttacagtact
aagacagatttgatgttcatgccactatccgcactgactggtgctaatttgaagacacga
gttgctgaagatgtttgcccctggtattctgggccatcgctcctggaatacctagataac
atgaaaacattggagcgtaaactcaaaacaccattcatgatgcctatcagcggaaagtac
aaggatatgggaaccgtgattgaagggaaggtggagtccggcttcatcaagaaaaattct
agcctcgtgatgatgcctggaaagacacctctcgaaattgtcgccatctacggggaaaca
gaggaagagctcccccatgctcaatgtggggatcaagtgcgtctgcgagtacggggaatc
gaggaagaagacgtcattccaggatttgtcctttcgagccctaagaagcccattcactgc
gtcactgcattcgaagcgcaaattcacatcctagaacttaagagtatattgacggccggt
ttcaactgtgttatgcatgttcacacaaccatccaggaggtcacattcgctgcgttactg
cataaactcgagaaaggaacgggaagaaagagtcgaaagcccccagcgtttgccaataag
gggcaagcaattatcgctcgccttgagtcggcaactggatcactgttccccatcgagagg
tatgaagactatcaacagcttggccgtttcactctccgtgatcagggacaaacaattgcc
atcggtaaggtcacaaagttgatcgtagaataa
DBGET
integrated database retrieval system