KEGG   Tuber melanosporum: GSTUM_00006992001
Entry
GSTUM_00006992001 CDS       T01282                                 
Name
(RefSeq) hypothetical protein
  KO
K03267  peptide chain release factor subunit 3
Organism
tml  Tuber melanosporum
Pathway
tml03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:tml00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    GSTUM_00006992001
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tml03019]
    GSTUM_00006992001
   03012 Translation factors [BR:tml03012]
    GSTUM_00006992001
Messenger RNA biogenesis [BR:tml03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Surveillance complex
     GSTUM_00006992001
Translation factors [BR:tml03012]
 Eukaryotic type
  Release factors
   GSTUM_00006992001
SSDB
Motif
Pfam: GTP_EFTU GTP-eEF1A_C GTP_EFTU_D3 GTP_EFTU_D2
Other DBs
NCBI-GeneID: 9188271
NCBI-ProteinID: XP_002839132
INRA: GSTUM_00006992001
UniProt: D5GFN0
LinkDB
AA seq 730 aa
MSGNTPNSWEDAAGDDNDLARQAQDQLNLNRPQQQQQGSGFRPSYNAPTFQPGAASFTPG
APAFTPGAGSYGQAGYGAGYGQQYPQYGQYGQYGMQGGYEQYGQQYGNYGGGYGQQAAYG
QQPGQFSGYQQQQQQQQPYRPPHILRQQQQQAAPQAAKKQDSAPASGTSSPTPSKSGTST
PITTTSAAAAPKVLKIGGDAAPKVLKIGGDPAPSHKREPDNKPVSGSGVAANKAVAASLA
GGSGKTSPSPGGPPVGKSSPAPTAAGKAAQLAAEKREADAVARAQEDEIDDSVIEELYGK
EHVNLIFIGHVDAGKSSLGGAILYATGMVDERTMEKYKRDAKEQGRESWYLSWALDLTKE
ERAKGKTVEVGRAYFETEKRRYTVLDAPGHKNYVPNMIGGASQADVGILVISARKGEYET
GFEKGGQTREHAVLARTQGVNKLIVAVNKMDDPTVCWSKERFDECTTKLTQFLKGTGYST
KTDLMFMPLSALTGANLKTRVAEDVCPWYSGPSLLEYLDNMKTLERKLKTPFMMPISGKY
KDMGTVIEGKVESGFIKKNSSLVMMPGKTPLEIVAIYGETEEELPHAQCGDQVRLRVRGI
EEEDVIPGFVLSSPKKPIHCVTAFEAQIHILELKSILTAGFNCVMHVHTTIQEVTFAALL
HKLEKGTGRKSRKPPAFANKGQAIIARLESATGSLFPIERYEDYQQLGRFTLRDQGQTIA
IGKVTKLIVE
NT seq 2193 nt   +upstreamnt  +downstreamnt
atgtctggaaacacgccaaactcatgggaggatgcggccggggacgacaatgacctggct
cgacaagcacaagatcagttgaacttgaaccgaccgcagcagcagcagcaaggttcggga
tttagaccgtcgtacaatgccccgacattccagcccggtgctgcttcgttcacgcctgga
gctcctgccttcactcctggggccggtagctatggccaggctgggtacggagccggatat
gggcaacaatatcctcagtatgggcagtacggtcagtatggtatgcaaggagggtacgag
caatatggacaacagtacggaaattatggtggtggatatgggcaacaagctgcatacgga
caacagcctggccagttttctggataccagcaacaacagcagcaacaacagccttaccga
ccgccacacattcttcgtcaacaacaacagcaggcagctccacaggctgctaaaaagcag
gactcagcaccagcttccggaacttcttctccaaccccttccaagagcgggacctctacc
cctatcactactacatccgccgccgctgctccaaaggtgctcaagattgggggtgatgca
gctccaaaggttttgaagattggcggagatcctgcaccctcacacaagagggagccggat
aataagccagtttctggctccggtgttgctgctaataaggccgttgctgcttccctagct
ggaggaagtggaaagacgagcccaagccctggtggacctcctgttgggaagtcatcccct
gccccaactgccgcagggaaggcggcccagctagctgcggaaaagcgagaagcggatgct
gtggcaagggcgcaagaggacgaaatcgatgactctgttattgaggagctttacgggaag
gaacacgtaaatctcatctttattggtcacgtcgatgctggaaaatcatctcttggaggg
gcaattctatacgccacagggatggtggatgagcgcactatggaaaaatataagcgtgac
gccaaagaacagggtcgtgaatcatggtatctctcatgggccctcgatttgacaaaggag
gaacgcgcaaagggcaaaactgttgaagttgggcgtgcatatttcgagaccgagaagcga
cgatatactgtccttgacgccccaggtcacaagaattatgttcctaacatgattggtggc
gcttcacaggccgatgttggaatattggtcatttctgctagaaagggagagtatgagaca
ggattcgagaaaggaggacaaactagagaacacgcggttttggccagaacccagggtgta
aacaaattaatcgtagcggttaataagatggacgacccaaccgtctgctggagcaaggaa
cgctttgatgaatgcacgaccaagctcacacaattcctcaagggaacaggttacagtact
aagacagatttgatgttcatgccactatccgcactgactggtgctaatttgaagacacga
gttgctgaagatgtttgcccctggtattctgggccatcgctcctggaatacctagataac
atgaaaacattggagcgtaaactcaaaacaccattcatgatgcctatcagcggaaagtac
aaggatatgggaaccgtgattgaagggaaggtggagtccggcttcatcaagaaaaattct
agcctcgtgatgatgcctggaaagacacctctcgaaattgtcgccatctacggggaaaca
gaggaagagctcccccatgctcaatgtggggatcaagtgcgtctgcgagtacggggaatc
gaggaagaagacgtcattccaggatttgtcctttcgagccctaagaagcccattcactgc
gtcactgcattcgaagcgcaaattcacatcctagaacttaagagtatattgacggccggt
ttcaactgtgttatgcatgttcacacaaccatccaggaggtcacattcgctgcgttactg
cataaactcgagaaaggaacgggaagaaagagtcgaaagcccccagcgtttgccaataag
gggcaagcaattatcgctcgccttgagtcggcaactggatcactgttccccatcgagagg
tatgaagactatcaacagcttggccgtttcactctccgtgatcagggacaaacaattgcc
atcggtaaggtcacaaagttgatcgtagaataa

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