Tuber melanosporum: GSTUM_00007008001 Help Entry GSTUM_00007008001 CDS       T01282                                  Name (RefSeq) hypothetical protein   KO K10643   CCR4-NOT transcription complex subunit 4 [EC:2.3.2.27] Organism tml  Tuber melanosporum Pathway tml03018   RNA degradation Brite KEGG Orthology (KO) [BR:tml00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     GSTUM_00007008001  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03000 Transcription factors [BR:tml03000]     GSTUM_00007008001    03019 Messenger RNA biogenesis [BR:tml03019]     GSTUM_00007008001    04121 Ubiquitin system [BR:tml04121]     GSTUM_00007008001 Enzymes [BR:tml01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      GSTUM_00007008001 Transcription factors [BR:tml03000]  Eukaryotic type   Zinc finger    Cys3His zinc factors     GSTUM_00007008001 Messenger RNA biogenesis [BR:tml03019]  Eukaryotic type   mRNA surveillance and transport factors    mRNA cycle factors     P-body specific factors      GSTUM_00007008001   mRNA degradation factors    3'-5' decay     Ccr4-NOT complex      GSTUM_00007008001 Ubiquitin system [BR:tml04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    Other single Ring-finger type E3     GSTUM_00007008001 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  zf-RING_4 zf-RING_2 zf-C3HC4_3 Baculo_IE-1 Prok-RING_4 zf-C3HC4 zf-UDP Motif Other DBs NCBI-GeneID:  9188296 NCBI-ProteinID:  XP_002839157 INRA:  GSTUM_00007008001 UniProt:  D5GFQ5 LinkDB All DBs AA seq 1293 aa AA seqDB search MSRVQQDTFIDDTEEFCPLCVEEFDIQDRNFRPCPCGYQICQFCYNNIKNNLNNLCPACR RPYDEKTIEWKGISAEEMRADQNKKNRQQNEKRKLEAQKREIDALNRKHLSGLRVIQKNL VYVTGLNPRIPEEDLLQTLRGKSYFGQYGKIIKIVIRQWVSSQNGDRTLRATYGTTKYCS AYLRNEACPNKNCMFLHEPGEEADSYDRQQMSTFTVRQQEGAPSQARPPQHQPPITTATP THPVHPPPTQQQSAQMARVSSHQGGSSSIGDNGESSALPSTANWAKNPPTPAARSVAPVI QPQGSAILSKGSTPSPRSVPAAPMVQTQSQESGKSGSSLGKAPASTGSGGNSGPGPVGKP PGGLATNNQVPTQTSEASSSSVQDSTTNALRSPTKPSPPELPIPVQEHLKRLENCVRAVS NPKFRFVFSTEGMTEEDIADLEKMPPMFDRHGGRRRRENAERLRAQQQQQHEEAESDIPQ PQPPVGTMAAAPGLVPLNLTGRGNTPSQRDLLKEVAASHPQQQPLGAFQQQENLQHQQAM RVLTPGGILHPQQQQQQQQQIQQSFSPFGAMGNPQQQQQQTHGGSLHTRQTSRYNFANDN PAVASTSVNPRGNIAHMTEQLRMMPQQAQQQQQQQLHNQQQLAAQFYGAGGAPGLSGGML GGTVQQPPPGLKSAPTPPAPGMSGIPMGGLHGLGSQFSGLGLGGHHNKSESSDALLRELM RSNGAGALGNTGLGGRAGDGKRMHVDSYWGGGSAKPSPVGDLADPSILQQQMQHHQGGIQ AGQQGSGITPQERKLTPGMVDEDEFPALAPSTKENALALPPIASTLKPKKLPPGPIGKKK DESLEAAKDEHARPTQAKGKPVLPSVNTTAAAASSSGHRAISPAIVTPSTVSCEGTTPTS PAPPTAASAVKQGPRMIRILSSSSSIHSPAIRTPIGGGVGIGESDTGSNGGSSRPVSPPP NSQHSSKKGKTKSALKKERIAAARKEAEERERERERLERGSVTQAPVVGRMKKKGRKKDT TIGGGDPVAGGGYADEEKEEKEMEASNSATPQTVVAPTTVSLPSPGKEPITTTSIPAPTK AHTPAPVPTPAPTPAAIPAPVAPAPSTPTTPAVEQDGKQQSAKTTAQLLAEFQEAAKMKF SKLDMFKPLTTLKWEHYITSEEIQLIKTAVIENNNSQPILTVEPDCHPYQYPIRGGGVVN ISLVVTPTGLQMTGLSAEQQERYLRLEERHGRGKAWQKWTVEALDFDECDKEVGDASVEE LEKIVYASRKEVEGIEKKLEKLLKRNKKLVGLL NT seq 3882 nt NT seq  +upstreamnt  +downstreamnt atgtctcgagtacaacaagatactttcatcgatgatacagaggagttctgtcctctgtgt gttgaggagtttgacatccaagatagaaatttcaggccctgtccttgcggctatcagatc tgccaattctgctataacaatataaagaataatttgaataatctgtgtcccgcttgcagg cgtccgtacgatgagaaaaccatagaatggaaaggcatctctgccgaagagatgagagcc gaccaaaacaagaagaatcgtcagcagaatgagaaacgtaaactcgaagctcagaaacgt gagattgatgctctgaatcgtaaacacctttctggtcttcgcgttattcaaaaaaatttg gtctatgtgactggtctcaacccccgcatacctgaggaggatctgcttcaaactctgaga ggaaagagttattttgggcaatatgggaaaattatcaagattgtgatccggcaatgggta tcaagtcagaatggcgacagaaccttaagagctacttacgggacaacgaagtattgctct gcctatctccgtaatgaggcttgtccaaataaaaattgtatgtttcttcatgagcccgga gaagaagcggattcctacgatcgacaacaaatgtctacctttactgtccgccagcaagag ggggctccatctcaggcgcgcccgcctcagcatcagcctcctatcactacggcaaccccc actcatccagtccatccaccgcctacccagcagcagagtgcgcagatggcccgggttagt tcacatcaaggtggatcgtcaagtattggcgataatggagagtcttctgcattaccgtct acagcaaactgggcaaagaaccccccaacgcccgccgccagatctgtggctcccgtaata caaccgcaaggttctgctatattatccaaagggtccacgccaagcccacgcagtgtacct gctgccccaatggtacagacccagagccaagaaagtggcaagagtggatcaagtcttgga aaggcgccagcttcgactggatcaggaggcaattcgggtcctggtcctgttggtaagcca cctggcggactagcgaccaataatcaagttcccactcaaacatcagaggcctcttcgtca tctgtacaagattctacgactaatgctcttcgttctcctaccaaaccgagcccaccagag cttccaattccggttcaggaacatttgaagcgtctcgaaaactgcgtacgagctgtttcc aaccccaaattccgctttgtgttttcaaccgagggtatgactgaggaagacattgccgat ctggagaagatgcctcccatgtttgaccgtcatggaggaaggcgtcggagggagaatgct gagcgactgagagctcagcagcagcagcagcacgaggaggcggaaagtgacataccacaa ccacagccccccgttggtacgatggcggccgcccccgggctggtgccactaaatttgacg gggagaggaaacaccccttcccagagagatttgcttaaggaagttgcggcgagtcatcct caacagcagcctcttggagctttccagcagcaagaaaaccttcaacatcaacaggctatg agggtgctcactcctggcggtatcctgcatccacagcagcagcagcagcaacagcaacaa attcagcagtcgttcagtccctttggcgctatgggtaatccccaacagcaacagcagcag acgcatggtggatcgttgcataccagacaaacttctagatacaattttgccaatgacaat ccggccgtagcatctacctctgtcaatcctcgtgggaacattgctcatatgaccgaacaa ctccgtatgatgccgcaacaggctcagcagcagcagcagcaacagctgcacaaccaacag cagcttgccgcacagttctatggggctggtggcgcgccaggtcttagtggcggtatgctt ggaggtactgtgcagcaaccgcctccagggttgaagagtgcaccaaccccgccggctcca ggcatgagtggtattcctatgggcgggcttcatggtcttggtagtcaattctcaggactg ggacttggcggtcatcataataaatccgagagctcagatgcccttcttagagaattgatg agaagcaatggagctggtgcattggggaatactgggctgggcggaagagccggggatggt aaacgtatgcatgttgattcgtattggggaggggggagtgctaaaccaagtccagtggga gacttagcggatcctagcatcttgcagcagcaaatgcaacatcaccaaggtggaattcag gctggccagcaaggttctggaataactccccaagaacgaaagcttactcctgggatggtg gatgaagacgaattcccggctctggccccatcgactaaggagaacgcattagcattgcca ccgatcgctagcacgctgaaaccaaagaagctaccgccagggccaattgggaagaaaaag gacgaaagtcttgaagctgcaaaagatgagcatgctcgccctacacaagctaagggaaag ccagtcttgccttcagttaatactactgccgctgctgcaagttcctctggacatcgtgct atttctcctgccattgtgacgcccagtaccgtctcctgtgaggggacgaccccaacatct cctgcgcctccgaccgctgcaagcgccgtcaagcagggtccaaggatgatcagaatcttg tcttctagctctagtatccattctccagccatcaggacgcctattggaggtggggttggg attggcgagagcgataccggttccaatggtggaagcagcaggcctgtcagtcccccgcct aattctcagcactcttctaaaaaaggcaagacaaagagtgcgctgaagaaagagaggatt gcagcggcgaggaaggaagctgaggagagagagagggaacgcgagaggcttgagcgagga tctgtgacacaagctcccgtagtgggcaggatgaagaagaagggacgcaagaaggatacc acgattggtggaggagatcccgtcgcaggcggaggctacgctgatgaagagaaggaggag aaggagatggaggcttccaactctgctaccccccagacagttgttgctcctactactgta tctcttccttcccctgggaaagagcctatcactaccactagcattccagctcctactaaa gcccatacaccggcccctgtgcctactccggcccctactcccgcagcaatcccagctcct gttgctcccgctcctagcacgcctactaccccagcagtcgagcaagatggaaagcagcaa tccgcaaagactacagctcagctcctcgccgagttccaagaagcggcaaaaatgaaattc tccaaactcgacatgtttaaacccctcacaaccctgaaatgggagcactatataacgtcc gaagaaatccaactaatcaaaaccgccgtaatagagaacaacaacagccagccaatccta acggtcgagcccgactgccacccgtaccagtacccaattcgcggcgggggcgtcgtgaat atcagtctcgtcgtcacccccacgggcctccaaatgacgggcctcagcgccgagcagcag gagcgctatctccgtctagaggagcgccacgggcggggaaaggcatggcaaaagtggacc gttgaggcactggattttgacgagtgcgataaggaggttggtgacgcttctgtcgaggag ctggagaagattgtatatgcctcaaggaaggaggtggaggggatcgagaagaagttggag aagttgctcaagaggaataagaagcttgtcgggcttttgtga

DBGET integrated database retrieval system