Tuber melanosporum: GSTUM_00007246001
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Entry
GSTUM_00007246001 CDS
T01282
Name
(RefSeq) hypothetical protein
KO
K20408
SEA/GATOR complex protein SEA2/WDR24
Organism
tml
Tuber melanosporum
Brite
KEGG Orthology (KO) [BR:
tml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tml04131
]
GSTUM_00007246001
Membrane trafficking [BR:
tml04131
]
Autophagy
Other autophagy associated proteins
SEACAT/GATOR2 complex
GSTUM_00007246001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40_CDC20-Fz
WD40
WD40_WDHD1_1st
Beta-prop_EIPR1
Beta-prop_EML_2
WDR55
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
EIF3I
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT122_1st
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
ANAPC4_WD40
WDR90_beta-prop_4th
zf-RING_16
Beta-prop_WDR19_1st
WD40_RFWD3
Beta-prop_NUP159_NUP214
Beta-prop_IFT140_1st
NBCH_WD40
WDR54
TFIIIC_delta
WD_LRWD1
Beta-prop_Vps41
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
9184581
NCBI-ProteinID:
XP_002839328
INRA:
GSTUM_00007246001
UniProt:
D5GG76
LinkDB
All DBs
AA seq
1073 aa
AA seq
DB search
MADPFNPHYHSQGLTHHHPHHPHTSNLHPSIQSPAPPPPPPPPPPTPAPAPAVTHSRAPK
AVFARLTQPFIGTSRPPSSSGPGSGLHGNLPTSAPDCNNFLLLRENRYNLNSPIFALSAN
IEGDQVVIAGRGILRILRVSYDEIAEASVLRVPAEQKKHPQYDVKWGTVHQKNTVATAGT
NGTICVYDTKDGMLDRQLREHGRQVHKVAFNPADGRLLLSASQDGTVKLWDLREKKSRLT
FVGRADAVRDVQFNAGNAVEFAAAFDNGTIQRWDYRKDNTYERSLSAHNGPAFTVDWHPD
GKHCASGGRDRTVKVWDFYADPRQKAKHTISTMTSVSRISWRPLKQVTTELATCAIGNDH
RVHVWDLKRPYIPTRIMDEHENAVTGILWKDEDTLWSCSKDNMFVQNDVSFASRPINSLT
HGAFSWSPTGSFTFTVEQRKSRRSTSRGFDSEDDLAGHDRRRHGRSSSFRSSKPTLGGLE
TLDKIFVPSQASASVHIPGLFDEVAFSYLAQNYIFDLEGVMGGSKISLGEACEANARTAW
MMQKYRTAQTWKVLQLALVREEKAIERRHEAKATGLSPATGVASSLMMRKQALAAAEQSN
SGGATPLAGPTHIGIATPTPGRPDGSVDEALLLLPPAFGTSLGSSTTSTDGEEYTGGHVN
DDETEGAKHQPPLDVTTDAMVGGEKPILTDSQNGVVNTTTANINNYNTTSATTATTIGSL
ALFSESTGHSPATPIPPVPPIPMYQSAGSPAVHMLHSEQYSSSASGNMEKRRERFYSLAS
ETTTTSSSSYGDFRNRVSEDDDESTSPKTGTWMEAIVEEPPLPPPPPPPQQPPASAPPSL
HLPSAKNKASQATQGKEEDQTFTLHPLPLLETLLEYYASTTDVQMHTTIFLLLSSSQTFS
PSPLLKALFNTPTSTPPTTSSPTTAAITATPPLSLLESISSYLDLLRRLNLHSVAASVIK
CAQALPEFTALGQTNTHLDFACGRCARPIAIATATATNTATSMKVGAGGGGLGCGKCGAV
DGCVICWGKVGRWSMCQGCGHGGHDGCLREWFLGGGTRGECAAVGCGHYCLPE
NT seq
3222 nt
NT seq
+upstream
nt +downstream
nt
atggcggatccctttaatcctcactaccactcgcagggtctaacgcaccaccacccccac
catccccacacatctaatctccatccctcgattcagtcccccgcacctccaccgcctcca
ccgcctccgccgccgacacccgcaccggcgccggccgtgacgcatagcagggctcccaaa
gcagtctttgcaagattgactcagccgtttatcgggacgagtagacctccgagctcttct
gggcctgggagtgggcttcatgggaatctaccgactagcgctcctgattgcaataatttt
cttttgttgagggaaaaccgatataacctcaatagccctatctttgcgctctccgcaaac
atagaaggtgaccaggtcgttatcgcaggtcgtggtatccttaggatcttgcgtgtaagc
tatgacgagatagctgaagcttccgtcttgcgtgttcccgcggagcagaagaagcacccg
cagtacgacgtaaaatggggtacggtccatcagaagaacaccgttgcaacagcggggacg
aacgggactatctgcgtctacgatactaaggatgggatgctggaccgccaattgagagag
catgggagacaggtgcataaggtggcgttcaatcccgcggatgggaggctgctgttgagc
gctagtcaggacgggactgtcaagctttgggatttgagggagaagaagagtcggctgacg
tttgtggggagggcggatgcggtgagggatgtgcagtttaatgctgggaatgcggtagag
tttgccgcggcgtttgacaatgggacaattcagaggtgggactatcgaaaggataatact
tacgagaggagtcttagcgctcacaatggacctgcgttcacggtggattggcacccggat
ggaaagcactgtgctagtggtggtagggatagaactgtgaaggtatgggatttttacgct
gatcctaggcaaaaagcgaaacatacgatttctaccatgacgtctgttagtcggatttcc
tggcggccgttgaaacaagtgactacggagttggccacctgtgcgataggtaatgatcac
agagttcacgtatgggacctgaagcgtccttatatccccacgaggataatggatgagcac
gagaatgccgttacgggtattctctggaaggatgaggacaccctgtggtcttgctccaaa
gacaatatgtttgtacaaaatgatgtcagctttgcgagccgacctatcaattcccttacc
cacggggcattctcttggagccctacggggagctttacattcacggttgagcagcgcaaa
tcgcggaggagcacatcccggggcttcgactcggaggacgatctagcaggtcatgaccgg
cgaaggcatgggagaagcagttccttcagaagctcaaagccaacactgggaggtctagaa
accctcgacaagatatttgtgccgtcgcaggcatccgcgagcgtgcacatacccggcctc
ttcgacgaggtggccttctcatatttagcacagaattacatttttgacctggaaggtgta
atgggcggatcaaagatctcgctcggagaggcctgcgaggcgaacgctcggacagcctgg
atgatgcagaagtacaggaccgcgcagacgtggaaggtgcttcaactcgcactcgtgcgc
gaggagaaggcaattgagcgcagacatgaggcgaaggctactggcttgtccccggcaacg
ggggtagcgagtagtttaatgatgaggaagcaagcactagctgctgctgagcagagtaat
tccggtggagcgacgccgctcgcgggacctacgcatattggcatcgcaacacccacaccg
ggaagacctgacggttctgtggatgaggcgctgctactgctgcccccggcttttggaaca
agtcttggttctagcaccacctccacggacggggaagaatatactggggggcatgtaaat
gacgatgagacggagggcgcaaaacaccaacccccattagatgtcacgacggacgccatg
gtggggggggaaaagcccattttgacagactcacaaaacggggtagtcaataccacaact
gctaatatcaataattataatacgacctccgctactactgctaccacaataggctcgctg
gccctcttctcggagagcaccggccactcccctgcaacgcccatcccacccgtacccccg
attccgatgtaccagtcagcgggttccccagcagtgcacatgctgcacagcgagcagtac
tcctcctccgcctccggcaacatggagaagcggcgggagagattctactcgctggctagc
gaaaccacaaccacctcctcatcctcgtacggcgacttccgcaaccgtgttagcgaggac
gatgacgagagcacatccccaaaaaccgggacctggatggaagcgattgtggaagagccc
cctttaccaccaccaccgccgccaccccaacagccgcctgcttctgctccgccatcacta
cacctcccctccgcaaaaaacaaagccagccaagccacgcaggggaaagaagaggaccaa
acattcactctccaccccctccccctcttggagaccctcctggaatactacgcttcgaca
acagacgtgcaaatgcacacaacgatattcctcctcttatcttcctctcaaacattctcg
ccttccccgctactaaaagctctcttcaacaccccaacctcaaccccccctactacctcc
tcccccaccaccgccgccatcaccgccacccctcccctctcccttctagaatcaatatcc
tcatatctggacctcctccgccgcctcaatcttcactccgttgccgctagcgtgatcaag
tgtgcccaagccctccccgaattcactgctctcggccagacaaatacccatctagacttt
gcctgcggcagatgcgctcgccccattgccatcgctaccgccactgccactaatactgct
acttctatgaaggttggtgctgggggtggggggctagggtgtggaaagtgcggggccgtt
gatggatgcgtgatttgttggggcaaggttgggaggtggagtatgtgccaaggctgtgga
catggtgggcatgatgggtgtttgagggagtggtttctcggcggtggtactagaggggaa
tgcgctgctgttggatgtgggcattattgtttgccggagtag
DBGET
integrated database retrieval system