Tuber melanosporum: GSTUM_00007331001
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Entry
GSTUM_00007331001 CDS
T01282
Name
(RefSeq) hypothetical protein
KO
K03362
F-box and WD-40 domain protein 1/11
Organism
tml
Tuber melanosporum
Pathway
tml04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
tml00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
GSTUM_00007331001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tml04121
]
GSTUM_00007331001
03036 Chromosome and associated proteins [BR:
tml03036
]
GSTUM_00007331001
Ubiquitin system [BR:
tml04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
GSTUM_00007331001
Chromosome and associated proteins [BR:
tml03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
GSTUM_00007331001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_WDHD1_1st
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_TEP1_C
Beta-prop_TEP1_2nd
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_EML_2
WDR55
Beta-prop_SCAP
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT122_1st
Beta-prop_WDR75_1st
Beta-prop_EIPR1
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_DCAF12
Beta-prop_DCAF4
WDR90_beta-prop_4th
ANAPC4_WD40
Beta-prop_SPT8
Beta-prop_NWD2_C
Beta-prop_VPS8
HSCB_C
Beta-prop_LRRK2
VPS8_N
HetE-N
Motif
Other DBs
NCBI-GeneID:
9183180
NCBI-ProteinID:
XP_002839391
INRA:
GSTUM_00007331001
UniProt:
D5GGD9
LinkDB
All DBs
AA seq
732 aa
AA seq
DB search
MASNSTPSPPHLSTQELKNAAAGVVSEPVSLPRPLRNSQSFRLDEGYSGEETPIVYDEAS
GQDLRTVREGVDFKIPPWMAGLNDALREEYAYKLIRTLPTSRIASLVDRLVPILYLDFVQ
MLPPELSLQILSLWKDLYEVQGWRSNDSEIIKLENQLREGPEDDLKQQMEAKRKAEDQKD
EEKNLRDIARRNSERFRNSVEKSGTTNTEVDMNNITQSTEGLDMSFYSNVSHDPGPIPGQ
GTSPPLPIEPTLTVPGYGSPRVNWAFLFKYRKRLEDNWIHNRYSTFQIPHPDFPTEGHAE
CIYTIQYSPNYLVSGSRDRTIRVWDMKTRRLRGEPLRGHTGSVLCLQFDESPGEDILITG
SSDDSVIIWRFSTGEIIRTIEKAHQESVLNLKFSKRWLVTCSKDKLIKVWNRQQLETTDQ
DYPWHSNSGSALRNPFASGAFIGTRAPSTGPAKTLPPYTPVQVLIGHAAAVNAIQLHGDQ
IASASGDRLIKLWNLKTGTCEKTFVGHTKGIACIQFDGHTIVSGSSDQTIRVFDGRTQAE
IVTLSGHRALVRTVQATENRIVSGSYDETVRIWRRDIDGQWTDSHVLRQGGPETHHPRLI
HHAMHPTMPGNPQQGAVPQTPIPQAAIQMHQVHTVGPALAGAVAAAQLLPNPHHHLHHQP
QPPPPPQAQAQQQQTPPTHPLPTTSGTHRVFKLQFDARWIICCSQDSKIIGWDFAAGDQG
IVEASRFFEGGN
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgaacagtacaccttcgcctcctcacctttctacccaggaactcaagaacgcc
gctgccggagtagtatcggaaccagtatcgcttcctcgacctctcaggaattcgcaaagc
ttcaggttggacgaaggttacagtggggaggagacccctatcgtgtacgacgaggcgagc
ggtcaagatttacgaacggttagggagggtgtggactttaagattcctccttggatggcg
ggcttgaatgatgctctaagggaagaatatgcctacaagctcatacgcaccctgcccact
tcgcgtattgcctcactggttgaccgtttagttcctattctctatctcgatttcgtacag
atgctaccccctgaactgtcccttcaaatcctgtcattatggaaagatctatacgaagtg
cagggttggaggtccaatgattcggaaattataaagctcgaaaatcagctgcgtgaggga
ccggaagacgacctgaagcagcagatggaggcgaagaggaaggctgaagaccagaaagat
gaggagaagaatttaagggatattgctaggaggaattcggagagatttaggaatagcgtt
gagaaatctggtacaactaacaccgaggtggacatgaataacatcactcagagcactgaa
ggtctagacatgagtttctattctaatgtatctcacgatcctgggccgattccaggacag
ggaacctcccctccgcttcccatcgagcctactttgactgttcctggatacggatctccc
agagtcaattgggcatttctcttcaagtatcgaaagcgccttgaggacaattggatacat
aatcgatattctactttccagatcccccatcctgatttccccaccgaaggccatgctgag
tgtatctataccattcagtattcccccaattaccttgtctctggctccagagatcgtact
attcgggtttgggatatgaaaactaggagattgagaggtgagccgctcaggggccatact
ggtagtgtcttatgtctacaattcgatgagagcccgggcgaggatatcctgattaccggg
tcttcggacgatagcgtcattatttggaggttttccaccggggagataattaggacaatc
gagaaggcccaccaggagtcggtcttgaacttgaagttctcaaagaggtggttggttacc
tgctctaaggataagctcattaaggtttggaatagacagcagctagagacaacagatcaa
gactatccttggcattcgaactctggctctgcgcttcgtaatccttttgctagtggcgcg
tttattggcaccagggccccatcaacgggacctgcgaagactcttccaccctatacccct
gtgcaagtccttattgggcatgctgcggcggtcaacgctatccaacttcatggggatcag
attgccagtgcttcgggtgataggctcatcaagttatggaacctaaagacaggcacctgt
gagaagacttttgttgggcataccaaggggatcgcatgtatccagtttgacggtcacaca
atcgtttctggaagctccgatcagacgatccgagtcttcgacggcagaacccaagcggag
atcgtaaccctctctgggcaccgcgcattggtccgaacagttcaagcaaccgagaaccgc
atagtctccgggagctacgatgagactgtacgcatctggagaagagacatcgacggccaa
tggactgacagccacgtcctccgccagggcggaccagaaacccaccacccccgccttatc
catcatgcaatgcacccaacaatgcccggcaaccctcaacaaggcgccgtgcctcaaacc
ccgatcccccaagcagccattcaaatgcaccaagtccacactgttgggcctgcgctcgca
ggcgccgtggccgcagcacaactcctaccaaacccccaccaccacctccatcaccaaccc
caaccaccaccacctccccaggcgcaggctcagcagcagcagacgccgcctacacatcct
ttacctacgaccagcggtacccaccgcgtgttcaagcttcaattcgacgctaggtggatc
atttgctgttcgcaggatagcaagatcatcggatgggatttcgcggcgggcgatcaaggc
attgtcgaagcaagtcggttcttcgaaggggggaattga
DBGET
integrated database retrieval system