KEGG   Tuber melanosporum: GSTUM_00007471001
Entry
GSTUM_00007471001 CDS       T01282                                 
Name
(RefSeq) hypothetical protein
  KO
K12591  exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
tml  Tuber melanosporum
Pathway
tml03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:tml00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    GSTUM_00007471001
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tml03019]
    GSTUM_00007471001
Messenger RNA biogenesis [BR:tml03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Exosome cofactors
     GSTUM_00007471001
SSDB
Motif
Pfam: DNA_pol_A_exo1 PMC2NT HRDC
Other DBs
NCBI-GeneID: 9185603
NCBI-ProteinID: XP_002839490
INRA: GSTUM_00007471001
UniProt: D5GGQ9
LinkDB
AA seq 838 aa
MSDFLAAQEAGEPLGFSEMQDRLLAAVVATVKTSSGLAAEDVDFHRASNSEFGPSLDDCN
ERILAITNRLLASATCGSGISVPGLKEVDDVENHWTKIVEVIDDLLEKADTCLDEYTGAI
KERNPVPFPGARAAGMVPKPSRPSRKSIQRSANIPKPQLLFNEKIDNFDSAPWKPRLTSK
PHAVTPLGESIYLFKNELGINEYAHPYQAEIESMEYPKEVYSWMEPIPSRDWDEIPPTWV
DTPRALQEMIKDMRRCTEIAVDLEHHDTRTYIGLTCLMQLSTRDDDYIVDTLKLRGQLEP
LNEIFTNPRVIKVLHGAFMDIIWLQRDLGLYIVGLFDTFYAAQALEFARFGLAHILKKYV
NFDADKQYQMADWRLRPLPKEMLDYARSDTHYLLYCFDCMRNSLVEKSRGDVEHVLQKSK
ETALRRYIRDTYDAATGEGTFGWASQIIKFKFNRTQEFVFKAVHAWRDQAAREEDESPTF
VCSRSTLGALSTAMPTDYDGVAKCIHDTNHLAKSRIGEIVEAIKGALEQAGQADEAATEA
VAATATATPGASKATVNIFGDTVVAEARSATSSMFWGNVCGSSKWDEAATLKSALGEEIR
LAIPLPELTAAVFVSETPFASSAGAREVPIDPGARAEHQYVKGRGGTKRENEIIVVKSLG
GGASGRKRKASEVEQYDDNNDAISDDHNAHSPNYSSHGGNSRGGSEGEEEGDESEGPLGV
NAPTLLGGPMGANNAVGERKSRKQSKNSPGQGQQESNAPVRGTSLVDVRESSFEPLDYSK
APSVLHGEKRSQGKAGADGSKKLSGTKRFDPYSKFGEGPKGVRRSQQEKAGKSLTFKS
NT seq 2517 nt   +upstreamnt  +downstreamnt
atgtcggactttctagcagctcaagaagctggtgaacctttgggattttcagaaatgcaa
gatcggcttctagcagctgtcgtggcgaccgtcaaaacctcctctggtctagctgctgaa
gatgtggacttccatagagcgtctaattccgagtttgggccctccctggatgactgcaat
gagcgaatacttgcaatcacgaatagactgctggctagcgcgacgtgtgggtctggtatc
tcggtgccggggttgaaggaagtggatgacgtcgaaaaccactggacgaagattgtggag
gtcattgatgatctgttggagaaagcggacacctgcctggacgaatatactggcgctatt
aaagagagaaatccggtgccatttccgggcgctcgagcggctgggatggtacccaaaccg
agccgcccttcgaggaagtcaatacaaagaagtgcaaacattccaaaaccacaattacta
ttcaatgagaaaatcgacaatttcgattctgcaccgtggaaaccacgtttaacttctaag
cctcatgctgtgacgccgctgggtgaaagcatttatttgttcaaaaatgaactgggaatc
aatgagtatgcgcatccgtatcaggcggaaattgagtctatggagtatcccaaagaagtc
tacagttggatggagccaatcccctccagggattgggatgagattcctccaacctgggta
gacaccccgagggcacttcaggagatgataaaagacatgcggagatgcaccgagatcgct
gtagacttggaacatcacgatactcgtacttatattggtctgacatgtttgatgcagttg
agtacccgagatgatgattacattgtggatacattaaagctccgtggacaacttgagccg
ctgaatgaaatcttcactaatcccagggttatcaaggttctacacggcgcttttatggat
ataatttggttacagcgtgatcttgggctttacatagtcggtttatttgataccttctat
gccgcgcaggcgttggaatttgctcgctttggtcttgctcacattctgaagaagtatgtc
aattttgatgctgataagcagtaccagatggcggattggaggttgagaccacttcccaaa
gagatgctggattacgctcgctcagatacccattacctactttattgcttcgactgcatg
cgaaattctcttgtagagaaatcacggggtgatgttgagcatgtcttgcaaaaatcgaag
gagaccgcactccgacgctatatccgagacacatacgatgcggcaaccggggaagggact
tttggatgggcatcacaaattatcaagttcaagttcaatcgcacacaagagtttgtattt
aaggcggttcatgcttggcgcgatcaggcagctagagaagaggatgaaagcccaacattt
gtttgctcacggagcactctgggagctctttctactgcgatgccgactgattatgatgga
gtcgccaagtgcattcatgacaccaatcaccttgccaagagtagaattggtgaaatcgtg
gaagcgattaaaggggcactagaacaggcaggtcaggctgatgaagcggcaacagaagca
gtggcagcgacagcaacggcgacgccgggcgctagcaaagcgactgtgaacattttcgga
gatactgtcgttgccgaagccaggtccgcaacttcctccatgttctggggcaatgtgtgc
ggaagtagcaagtgggacgaggccgcaacactgaagtcggcgctgggagaggaaattaga
ctcgctattcctctcccggagctgacagctgcagtctttgtctcggagacaccctttgca
tcgtccgccggcgcccgggaagtgccaattgatcccggagcacgtgcggagcaccaatac
gtgaagggtcggggtggtacgaagagggagaatgagattatcgttgtcaaatctcttggt
ggtggcgctagtgggagaaagagaaaggcttcagaagtggagcagtatgacgataacaac
gacgcaatatcggacgatcacaacgcccactcaccaaattattcttcacatggggggaat
agccggggagggtcagagggggaggaagaaggggacgagagcgagggaccgctaggggtc
aatgctccaaccctgctaggcgggccaatgggcgcaaacaacgcggtgggtgagcgcaag
tccaggaagcagtccaaaaactcgcccgggcaggggcagcaggaatctaacgcaccggtg
agagggacctcccttgtcgacgttcgcgaaagctccttcgaaccattggattactcgaaa
gctccttccgttctgcatggcgagaagcgcagccagggcaaggcaggtgcagatggtagc
aaaaagctttctggaaccaagagattcgatccatattccaaattcggagagggtccaaag
ggtgtgcgcaggagccagcaggagaaggcagggaaatcgctgactttcaagagctag

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