Tuber melanosporum: GSTUM_00007494001
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Entry
GSTUM_00007494001 CDS
T01282
Name
(RefSeq) hypothetical protein
KO
K10755
replication factor C subunit 2/4
Organism
tml
Tuber melanosporum
Pathway
tml03030
DNA replication
tml03410
Base excision repair
tml03420
Nucleotide excision repair
tml03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tml00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GSTUM_00007494001
03410 Base excision repair
GSTUM_00007494001
03420 Nucleotide excision repair
GSTUM_00007494001
03430 Mismatch repair
GSTUM_00007494001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tml03032
]
GSTUM_00007494001
03036 Chromosome and associated proteins [BR:
tml03036
]
GSTUM_00007494001
03400 DNA repair and recombination proteins [BR:
tml03400
]
GSTUM_00007494001
DNA replication proteins [BR:
tml03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
GSTUM_00007494001
DNA Replication Termination Factors
ELG1-RFC complex
GSTUM_00007494001
Chromosome and associated proteins [BR:
tml03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
GSTUM_00007494001
DNA repair and recombination proteins [BR:
tml03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
GSTUM_00007494001
Check point factors
HRAD17(Rad24)-RFC complex
GSTUM_00007494001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_14
AAA_16
AAA_22
Viral_helicase1
nSTAND3
AAA_3
RuvB_N
RCF1-5-like_lid
Mg_chelatase
AAA_assoc_2
NTPase_1
Rad17
AAA_19
MeaB
AAA_24
AAA_11
DNAX_ATPase_lid
CbiA
KTI12
AAA_5
MipZ
Gp44_lid
Motif
Other DBs
NCBI-GeneID:
9185618
NCBI-ProteinID:
XP_002839506
INRA:
GSTUM_00007494001
UniProt:
D5GGS5
LinkDB
All DBs
AA seq
358 aa
AA seq
DB search
MSGESSKAALGRGIAATVATNTSGTPAYELPWVEKYRPIFLEDIVGNSETVERLKIIGKD
GNMPHLIISGMPGIGKTTSVLCLARALLGDAYKEAVLELNASDERGIDVVRNRIKGFAQK
KVTLPPGRQKVVILDEADSMTAGAQQALRRTMEIYSSTTRFAFACNQSNKIIEPLQSRCA
ILRYSRLTDAQVLHRLLEICLAEKVEHSEEGLAALIFSAEGDMRQAINNLQSTVAGFGFV
SADNVFKVVDSPHPIAVQALIKACYTGKIDAALEKLEELWGKGYSAIDIISTMFRVTKTV
DALSEHSKLEFIKVIGFTHMRILEGVATLLQLRGCIAKLTKINMSPELFVPKEGGTGE
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgagcggagaatcatcaaaggctgcactgggcaggggaatcgctgcgacggttgctaca
aatacttccggaacacctgcttatgagttaccatgggtcgaaaagtaccgtccgatcttc
ctagaagatatagtcggcaacagcgagacagtagagcgattgaagattatcgggaaggac
gggaacatgccacatttgatcatttctgggatgccagggattggtaaaacaacctcggtc
ctatgcctcgccagagccctcctaggagatgcgtacaaagaagcagtgctagaactcaac
gcttcggacgagcgcgggatcgacgtggtccggaatcgcatcaagggattcgcgcagaag
aaggtcacgctcccacccggaagacagaaggttgtgattctcgatgaagccgacagcatg
acggcgggggcccagcaggccctccgccgcacgatggaaatatactcatccaccacccgc
ttcgcgtttgcctgcaaccagagcaacaaaatcatcgagccgttgcaatcccgctgcgcc
atcctccgttactcccgcctcacagatgcgcaggtcctccaccgcctactcgagatctgc
ctggcggagaaggtggagcactcggaggagggcctcgccgcgctaattttctccgccgag
ggggatatgcgtcaggccattaacaacctgcagagcacggtcgcgggttttggcttcgtc
agtgcggacaacgtcttcaaggttgttgactcgccgcacccgattgcggtgcaggccttg
atcaaggcttgttacaccggcaagattgatgcagcgctggagaagctagaggagctttgg
gggaagggctattccgccatcgatatcatcagcactatgttcagagtcacgaagacggta
gatgctctcagtgaacattcgaagctggagttcatcaaagtcatagggttcacacatatg
cgcatcctggaaggcgtggccacactcctgcagctaagaggctgcatcgcgaaattgacg
aaaataaatatgtcgcccgagttgtttgtgccaaaggaaggagggacaggcgaataa
DBGET
integrated database retrieval system