KEGG   Tuber melanosporum: GSTUM_00007494001
Entry
GSTUM_00007494001 CDS       T01282                                 
Name
(RefSeq) hypothetical protein
  KO
K10755  replication factor C subunit 2/4
Organism
tml  Tuber melanosporum
Pathway
tml03030  DNA replication
tml03410  Base excision repair
tml03420  Nucleotide excision repair
tml03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:tml00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    GSTUM_00007494001
   03410 Base excision repair
    GSTUM_00007494001
   03420 Nucleotide excision repair
    GSTUM_00007494001
   03430 Mismatch repair
    GSTUM_00007494001
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:tml03032]
    GSTUM_00007494001
   03036 Chromosome and associated proteins [BR:tml03036]
    GSTUM_00007494001
   03400 DNA repair and recombination proteins [BR:tml03400]
    GSTUM_00007494001
DNA replication proteins [BR:tml03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    GSTUM_00007494001
  DNA Replication Termination Factors
   ELG1-RFC complex
    GSTUM_00007494001
Chromosome and associated proteins [BR:tml03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    GSTUM_00007494001
DNA repair and recombination proteins [BR:tml03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     GSTUM_00007494001
  Check point factors
   HRAD17(Rad24)-RFC complex
    GSTUM_00007494001
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 AAA_14 AAA_16 AAA_22 Viral_helicase1 nSTAND3 AAA_3 RuvB_N RCF1-5-like_lid Mg_chelatase AAA_assoc_2 NTPase_1 Rad17 AAA_19 MeaB AAA_24 AAA_11 DNAX_ATPase_lid CbiA KTI12 AAA_5 MipZ Gp44_lid
Other DBs
NCBI-GeneID: 9185618
NCBI-ProteinID: XP_002839506
INRA: GSTUM_00007494001
UniProt: D5GGS5
LinkDB
AA seq 358 aa
MSGESSKAALGRGIAATVATNTSGTPAYELPWVEKYRPIFLEDIVGNSETVERLKIIGKD
GNMPHLIISGMPGIGKTTSVLCLARALLGDAYKEAVLELNASDERGIDVVRNRIKGFAQK
KVTLPPGRQKVVILDEADSMTAGAQQALRRTMEIYSSTTRFAFACNQSNKIIEPLQSRCA
ILRYSRLTDAQVLHRLLEICLAEKVEHSEEGLAALIFSAEGDMRQAINNLQSTVAGFGFV
SADNVFKVVDSPHPIAVQALIKACYTGKIDAALEKLEELWGKGYSAIDIISTMFRVTKTV
DALSEHSKLEFIKVIGFTHMRILEGVATLLQLRGCIAKLTKINMSPELFVPKEGGTGE
NT seq 1077 nt   +upstreamnt  +downstreamnt
atgagcggagaatcatcaaaggctgcactgggcaggggaatcgctgcgacggttgctaca
aatacttccggaacacctgcttatgagttaccatgggtcgaaaagtaccgtccgatcttc
ctagaagatatagtcggcaacagcgagacagtagagcgattgaagattatcgggaaggac
gggaacatgccacatttgatcatttctgggatgccagggattggtaaaacaacctcggtc
ctatgcctcgccagagccctcctaggagatgcgtacaaagaagcagtgctagaactcaac
gcttcggacgagcgcgggatcgacgtggtccggaatcgcatcaagggattcgcgcagaag
aaggtcacgctcccacccggaagacagaaggttgtgattctcgatgaagccgacagcatg
acggcgggggcccagcaggccctccgccgcacgatggaaatatactcatccaccacccgc
ttcgcgtttgcctgcaaccagagcaacaaaatcatcgagccgttgcaatcccgctgcgcc
atcctccgttactcccgcctcacagatgcgcaggtcctccaccgcctactcgagatctgc
ctggcggagaaggtggagcactcggaggagggcctcgccgcgctaattttctccgccgag
ggggatatgcgtcaggccattaacaacctgcagagcacggtcgcgggttttggcttcgtc
agtgcggacaacgtcttcaaggttgttgactcgccgcacccgattgcggtgcaggccttg
atcaaggcttgttacaccggcaagattgatgcagcgctggagaagctagaggagctttgg
gggaagggctattccgccatcgatatcatcagcactatgttcagagtcacgaagacggta
gatgctctcagtgaacattcgaagctggagttcatcaaagtcatagggttcacacatatg
cgcatcctggaaggcgtggccacactcctgcagctaagaggctgcatcgcgaaattgacg
aaaataaatatgtcgcccgagttgtttgtgccaaaggaaggagggacaggcgaataa

DBGET integrated database retrieval system