Tuber melanosporum: GSTUM_00007541001
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Entry
GSTUM_00007541001 CDS
T01282
Name
(RefSeq) hypothetical protein
KO
K11593
eukaryotic translation initiation factor 2C
Organism
tml
Tuber melanosporum
Brite
KEGG Orthology (KO) [BR:
tml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tml03019
]
GSTUM_00007541001
03036 Chromosome and associated proteins [BR:
tml03036
]
GSTUM_00007541001
Messenger RNA biogenesis [BR:
tml03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
GSTUM_00007541001
Chromosome and associated proteins [BR:
tml03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
GSTUM_00007541001
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
GSTUM_00007541001
microRNA pathway
RISC loading complex
GSTUM_00007541001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Piwi
ArgoMid
ArgoN
PAZ
ArgoL1
ArgoL2
Mac
HTH_39
Motif
Other DBs
NCBI-GeneID:
9181708
NCBI-ProteinID:
XP_002839547
INRA:
GSTUM_00007541001
UniProt:
D5GGK8
LinkDB
All DBs
AA seq
868 aa
AA seq
DB search
MATHTEGDLPKRPAFGTKGRPATIALNSYAVSRFPTLAINQYDVTIGSGNEKRALIKKIW
FSDKLQSEFGAAKNTVLFDGNKLAWSVTSFPFGDRHVTSVDLDEGDGRPARRGGGPARDN
KHRVVIQKSGRVPLQVVEAFVKGDYRLDNDVLVGINFLDHLMRETPSKHFITIKRSFFQS
AGKTPMERGVEAWKGIFQSVRATQGGRLTINVDVATTVFWSQGTVLDIACRMTWNGSPED
LQSKIVKEHGKGVISRDLRRLRRVSFFCTHRKRDTEVRKKVYTIEGFDQNAIDYTFEMKR
HNADGGVTTETITAYDYFLRQYNLRLKYPQLPLVKTRKKGEVFPMELCHIQEGQRYPFKL
DDRQTAEMIKFTVQRPTIRMEQIKSNVAQLDWKKDPILTKYGMEIDTNMIKSKGRILNAP
KICYGDGSTDRVFTPRDGKWDLRGKKFAKIGAPLKGWGFMIFAPQRNCDELTVKTFIRQL
VSVYIGHGGQVQNKEPIIMYADPKKSVGTNIFELYKKAGNQVQAKPQMLFFVLSAKSPQP
YNEIKAFCELNIGVVSQCVQSRHVAQAKAQYCSNVCMKVNAKLGGTTCFLDKSDHPLFGK
EASIIVGADVSHPAPGITKASFASMVGSTDMQGSRFAAICNTNGQGKECITTNNMVKFMC
TLLRAFRQETTKIPMRIFYFRDGVSEGQYKQIIDDELRDMREACKVLQADYNPKITVTIC
SKRHHTRFFPVERNAQDRNGNCLPGTIVERDVTHPTEYDFYLAAHNAIQGTARPVHYHVI
HDENKMPVDMFQALVYNSCYTYIRASNSVSLIPAVYYAHLASSRARAHEVADEGNTITTT
TSGEKRDPGDVADIRPLHDTIKHAMWYV
NT seq
2607 nt
NT seq
+upstream
nt +downstream
nt
atggctactcatacggaaggtgaccttccgaaacgccctgcctttggtactaaagggaga
cctgctactatcgccttgaattcatatgctgtttctagattccccactcttgccatcaac
cagtacgatgttaccattggctctggtaatgagaagcgtgccttgatcaagaaaatttgg
ttctcggacaaactgcaatcggagttcggagccgcaaaaaatactgtattgtttgatggc
aataagttggcatggtctgtgacctcgttcccttttggagatcgtcatgttaccagtgtc
gaccttgatgaaggtgatggtcgtccggcgaggcgaggtggcggacccgctagagataac
aaacatcgtgtcgtcattcaaaagtctggtagggtcccgcttcaggtcgttgaggccttc
gtgaagggggattatcgcctggacaatgatgttcttgtcgggattaatttccttgaccac
ctcatgcgggagacccccagcaagcattttattacgatcaaacgttccttcttccaatca
gctgggaaaaccccaatggaacgcggtgttgaagcatggaagggaattttccaatcggtt
cgtgctactcaaggtggtcgtcttaccatcaacgttgatgtcgcaacgactgtgttttgg
agtcagggcacagtgttggacattgcgtgccgtatgacttggaacggttctcccgaggat
cttcaatcaaagattgttaaggagcacggtaaaggcgtgatatctcgtgatttgcgccgt
ctcaggcgggtctccttcttctgcacccatcgtaagcgcgataccgaggttcgaaagaag
gtttatacaatcgagggatttgaccagaatgcgattgattacacatttgagatgaagcgt
cataacgctgatggaggtgttaccactgaaaccatcaccgcttatgattacttcctgagg
cagtacaatttgagactgaagtatcctcagcttcccttagtcaagacccggaagaagggt
gaagtttttccaatggagctgtgccacatccaggagggccaacgttatccgttcaagctc
gatgatcgtcaaacggcggaaatgatcaaatttactgttcaacgcccgactatccgcatg
gaacaaatcaagtcaaatgtggcccagttggattggaagaaggatcccatccttacaaaa
tatggtatggaaattgataccaatatgatcaagtccaaaggtcgtattttgaacgctccc
aagatttgctatggtgacggttcgaccgatcgtgtgtttactccacgcgacggtaaatgg
gaccttcgcgggaagaagtttgctaaaatcggtgccccactcaagggttggggtttcatg
atcttcgcgccgcagaggaactgcgatgagcttactgtgaaaacctttatccggcagttg
gtctcagtatacatcggccatggtgggcaagttcaaaataaggaaccgataatcatgtac
gcggacccaaagaagtccgtcgggactaatattttcgagctttacaagaaagccgggaat
caagtccaggccaaaccccaaatgttgtttttcgttcttagtgccaaatcgccccagcca
tacaatgagattaaggcattctgtgagctcaacattggtgttgtttctcaatgcgtccaa
tcgaggcatgtggctcaggcaaaggcgcaatattgctctaacgtttgcatgaaggtcaat
gctaagcttggtggcacgacttgttttcttgacaagagcgatcaccctcttttcggcaag
gaggcgagtatcatcgtgggcgctgatgtttctcatccagccccggggatcaccaaagct
tcttttgcttctatggttggatctactgatatgcagggtagtcgttttgcagccatttgc
aacacaaatggtcagggcaaggagtgcattactaccaacaatatggttaaattcatgtgt
acccttttgcgcgcctttcggcaggagaccaccaagatacctatgcgtatcttctatttc
cgcgatggtgttagcgagggccaatataaacagatcattgacgacgagttgcgtgatatg
agggaggcatgcaaggttttgcaggccgactataacccaaagatcactgtcaccatttgc
tctaagcgtcatcatactcgctttttcccagtcgagcgcaacgcgcaagacaggaacggc
aattgcctccctggaacaatcgttgaacgtgatgttactcatccaaccgaatacgatttc
taccttgcggctcataatgccatccaagggactgcgcgcccggttcactatcatgtcatc
catgatgaaaacaaaatgccggttgatatgttccaggcgttggtttacaactcctgctac
acttacattcgcgccagtaattctgtgtcattgatcccggcggtttattacgcccatcta
gcatcatctcgtgcccgtgctcatgaggttgctgatgagggcaatacaatcacgaccact
acttctggtgagaagagggacccgggcgatgtggctgatattaggcctcttcatgatacc
atcaaacatgccatgtggtatgtttaa
DBGET
integrated database retrieval system
