Tuber melanosporum: GSTUM_00007728001
Help
Entry
GSTUM_00007728001 CDS
T01282
Name
(RefSeq) pseudouridine synthase
KO
K15454
tRNA pseudouridine32 synthase [EC:
5.4.99.28
]
Organism
tml
Tuber melanosporum
Brite
KEGG Orthology (KO) [BR:
tml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tml03016
]
GSTUM_00007728001
Enzymes [BR:
tml01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.28 tRNA pseudouridine32 synthase
GSTUM_00007728001
Transfer RNA biogenesis [BR:
tml03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
GSTUM_00007728001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
Auto_anti-p27
Motif
Other DBs
NCBI-GeneID:
9182566
NCBI-ProteinID:
XP_002839670
INRA:
GSTUM_00007728001
UniProt:
D5GHA9
LinkDB
All DBs
AA seq
456 aa
AA seq
DB search
MHPKINLLITLRELVNISRRKYAMDTLPFKSSPGLSPIVFGSQEEVEKGPSSASSSSSSK
AGEGQSTKGRVSVPMVAQKDTAPKPPKFVNPPPVPQYSFEDGLRRVPPYQFSYNTYCKER
WRGKGVLEVFWSEFRDRPLEYYGMNGGGAQLASMQTIIASVDSKLENGDMLVHTLHRHEP
PVTAKPIETVYEDDRLIVINKPAGVPVHPAGRYNFNTVIEIMKHDYNGHAPLPCNRLDRL
TSGLMFMAKTPEAANDFMGQLQTRTIKKQYLARVKGKFPAGEVTCSQPILSVSPKLGLNR
VRASGKTAKTLFKRLKYNTEKNYSIVECHPFTGRTHQIRVHLQFLGHPIINDPIYCNRNV
WGPALGKGGEGEDEEIIERLNKVGREEEVRYEEIIEDYEGRKAEKLTGKRCEVCDTPLFS
DPGLHELGIYLHAKRYECEDGQWGYETELPEWATED
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgcatccaaaaatcaacctcctcataacacttcgagaactcgtcaatatatctcggaga
aagtacgccatggataccttaccttttaaatcatctccgggtctatccccaatcgtattt
ggctcacaagaggaagtagaaaaggggccgtcctcggcctcatcatcatcgtcttcgaag
gcgggggaaggacagtcgacaaaagggagggtatcggtgccaatggttgcgcagaaggac
actgcgcccaaaccaccaaagtttgtgaacccgcccccggtgccgcagtattctttcgag
gacgggttgagaagggtgccaccatatcagttttcgtataatacctactgtaaggagcgg
tggagggggaaaggggtgttggaggtgttttggtcagagtttcgagaccggccgctggag
tactatgggatgaatggcggcggggcgcagttggcctctatgcaaaccatcattgcgagc
gtggactcgaagctcgagaacggggacatgcttgtacatacactccacagacacgagcct
cctgtgacggcgaaaccaattgaaacggtgtacgaagacgaccgattgattgttattaac
aaacctgctggagtgccggttcaccctgctgggaggtataattttaatacggtaattgag
ataatgaagcatgactataacggccatgctccgcttccatgcaaccgcctggacaggtta
accagcggtctaatgttcatggccaaaaccccggaagctgcgaacgacttcatgggacag
ctgcaaactcgcaccataaagaaacaatacctcgcccgtgtcaagggtaaattccccgcg
ggggaggttacctgtagccagcccatcctctcggtatccccaaagttgggcttaaacaga
gtccgcgcaagcgggaagactgcgaagacgctgtttaagaggttaaagtataatacggag
aagaattatagcattgtggagtgtcatccgttcactggtaggacgcatcagataagggtt
cacctgcagttcttgggacatccgataattaacgatccgatatactgcaaccgcaacgtt
tgggggccagcgctaggaaaaggcggtgaaggtgaggatgaggagatcattgagaggctg
aataaggtcggtagggaggaggaggttagatacgaagagataatagaggactacgaaggt
cgtaaggcggagaaactgactggaaagcgatgcgaagtttgtgatactcctctgttttca
gacccaggactgcatgaattggggatctacttgcatgctaagaggtatgagtgtgaggat
gggcaatgggggtatgagaccgagctgccggagtgggctaccgaggattga
DBGET
integrated database retrieval system
