Tuber melanosporum: GSTUM_00007778001
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Entry
GSTUM_00007778001 CDS
T01282
Name
(RefSeq) hypothetical protein
KO
K14408
cleavage stimulation factor subunit 3
Organism
tml
Tuber melanosporum
Pathway
tml03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tml00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
GSTUM_00007778001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tml03019
]
GSTUM_00007778001
Messenger RNA biogenesis [BR:
tml03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
GSTUM_00007778001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
TPR_14
HAT_Syf1_CNRKL1_C
UTP6_C
CATRA-N
HAT
Activator-TraM
Motif
Other DBs
NCBI-GeneID:
9182603
NCBI-ProteinID:
XP_002839707
INRA:
GSTUM_00007778001
UniProt:
D5GH73
LinkDB
All DBs
AA seq
991 aa
AA seq
DB search
MAEHNNSDDADAAFLNALKAEQEMAEAGQKASELGGESELIGNEPEEGAEKEATFRELSD
QVEKDNHLQINESKDTSTAASGATSLLPGVAVASPDGGPSSVNGSAMGDPAAQPLLNANM
GAGPSTQESSAISSPSVTPVGALVPDENNNDSAPHTLSVTTPTAGSNNNDSLPVSSTTPV
NAPSTAVPVQSPVQKGNANVANKRKRLPQDIVGQLEDRIAEDPRGDIDAWLALIEEHRKK
GKFDDVRAVYERFFVVFPAAADQWISYVKMELANNELQHVERIFQRSLFNVPNVELWSMY
LDYIRRRNNLTTDTGGKARAVVNQSYEFVLNNVGCDREAGRIWTEYIQFVKSAPGNVGGS
GWQDQQKMDSLRKVYQKAVTMPVQGVEQLWREYDQFEQGLNKLTARKFLQERSPMFMTAR
GCLIELSNITKGLRRDTLSRLPPAPGYEGYEDYTRQVELWKKWIQWEKGDPLVLAKEDPA
SLSTRIIYVFKQALMALRFWPEIWFDAAEWCFANGMDDQGVDFLNQGMVANPESCLLHFK
YAERLEATTIIEGGEEALIRKGQLVRKPYDDLLNMLYEQVQKIQRKEKEELARIEDAFEL
TNPRNAEDDDEDDDPTTAATRAAKDAQVATLREGTKAQLQVMTKTISAVWINLMRAMRRV
QGHGKVNEALGGSRQIFADARRRGKINSDVYVASALIEYHCYKDPAALKIFERGMRLFPE
DENFALEYLKHLVAINDITNARAVFETFVGRVTAEKARKVYEFFYDYEAHYGELGQVYKM
EKRMSELYPTDPYISRFSSRYAYRAVDPCSFLAVVSPAQQCKPKSQAISPPVPDHLPRDG
RDYRDHPQPPPTAPANGRTVSPKRPANEELSDSSEHQRPRKLHRPDSPLKGAAGRRLDQQ
KRYQQNQRQPQQHQPLPMQMHQPPAPTQLPDLIMYLLSILPGADKYQAARFRPEAMVGLL
GNINLPRDVQANNRESASIHRSVPQGPRRQY
NT seq
2976 nt
NT seq
+upstream
nt +downstream
nt
atggcagagcataataactcggacgatgctgatgccgcgtttctcaacgcgctcaaagcc
gagcaggagatggctgaagccgggcagaaagccagcgagctcggaggggaatctgagctg
attggcaatgagccagaagagggagcagaaaaagaagctacatttagggaactatctgat
caagttgaaaaagacaatcatttacaaattaacgagtcgaaagacacttcgactgctgct
tctggtgctacatccctcctcccaggtgttgctgttgccagtcctgacggtggcccctcg
agcgtcaacggctcggcaatgggtgatcctgccgcccaacccctcctgaatgcaaacatg
ggtgctggcccaagcacgcaagagtcgtccgcaatttcctccccttctgttacacccgtt
ggtgcgcttgttcctgatgagaataataatgattctgctccgcacacactatctgttacc
actcccactgctggttctaataataatgattcccttcctgtgtcgtctactactcctgtc
aatgccccttctactgctgtacctgttcaaagcccggttcaaaaggggaatgcgaacgtt
gccaataagaggaagaggctcccacaggacattgtaggacagcttgaggataggattgca
gaggatcctagaggagacattgacgcctggttggctttaattgaagaacataggaaaaag
ggcaaatttgacgatgttagagccgtttatgagaggttctttgtagtatttccagctgcg
gccgaccaatggatctcttacgtcaagatggaactagcgaacaacgagttgcaacatgtt
gagcgcattttccagagatctttgtttaatgtccccaatgttgaactttggtccatgtac
ttggattatatccgccgccggaataatctgaccacagacaccggagggaaagctcgcgcg
gttgttaaccaatcctatgaatttgtattgaacaatgtcggatgtgacagggaggccggg
aggatttggactgaatacatacagtttgtgaagagtgcacccggaaatgtaggtggcagt
ggctggcaagaccaacagaagatggactccttgcgaaaggtatatcagaaggccgtcacc
atgcccgttcaaggcgttgagcagttgtggagggagtatgaccagttcgaacaaggtttg
aacaagctgacggcgagaaaatttcttcaagaacggtccccaatgtttatgactgccaga
ggttgtcttatcgagctatccaacatcaccaagggtcttaggcgtgatacattgtcgcgt
ttgccgcctgcgccgggatatgaaggttacgaggattacaccaggcaggttgagctatgg
aagaagtggatccagtgggaaaagggcgatcccctcgttcttgccaaagaggatcccgca
agtttgagtacaaggattatatatgtctttaaacaagctcttatggctttgaggttttgg
ccagaaatctggttcgatgcagcagagtggtgcttcgcaaatggaatggatgaccaagga
gtagatttcctcaatcagggaatggttgcaaacccagagagttgtcttttacatttcaag
tacgctgagagattggaagcaaccaccatcattgaaggtggggaggaggcgcttatacga
aagggccaactggttagaaaaccttacgatgatttactcaacatgctatacgagcaggtt
cagaaaattcagcgaaaggagaaggaagagcttgcccgaattgaagacgccttcgaacta
accaaccctcgtaatgcggaggatgacgacgaagacgatgaccctactacggctgcgact
agggcggccaaggatgcccaagttgcgacattgagggagggtacaaaggcgcagcttcag
gtaatgacaaagactatttcggctgtatggatcaacttgatgcgtgcgatgcgacgtgtt
caaggccatggcaaagtgaatgaggcactaggtggaagtcgtcagatatttgcggacgca
aggaggaggggcaagatcaatagcgatgtgtatgtagcaagtgcactgattgaataccac
tgctacaaagatcctgctgctctgaaaatctttgagagggggatgaggctttttcccgaa
gatgagaattttgcgttggagtacttgaagcacttggtcgctattaacgatattactaat
gcaagagctgtgtttgagacttttgtcggcagagtgacagctgaaaaggctcgaaaggtg
tacgaattcttttacgactacgaagctcactacggggagcttggccaggtttataagatg
gagaaacgcatgagtgaactctatcctactgatccatacatttctcgattctcgagcaga
tatgcctatagagccgttgatccctgctcgttccttgccgttgtctccccagcacaacaa
tgcaaacctaaatcgcaagccatatctccgccggtacctgaccaccttccccgagacggc
cgcgattaccgggaccaccctcagcctcctccgactgcgccagccaacggccgaacggtt
tcaccaaagcgtcccgcgaatgaggaactctcagactcttctgagcaccaaaggcccaga
aagctccatcgacccgactctccattgaagggtgccgcaggccgaaggctagatcagcag
aaacggtatcagcagaatcaaaggcagcctcaacagcatcaacccctgccgatgcaaatg
catcaaccgcctgccccaacccaactccccgatcttattatgtatctcttgagtattcta
ccaggcgcagacaagtaccaagcagcaagatttagaccagaagccatggttgggcttctg
ggaaatattaatttgcctagggatgtgcaggcgaataatcgtgagtctgccagtattcat
cgttccgtcccgcagggtccgagacgacagtattaa
DBGET
integrated database retrieval system
