Tuber melanosporum: GSTUM_00007890001
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Entry
GSTUM_00007890001 CDS
T01282
Name
(RefSeq) hypothetical protein
KO
K27407
RNA-binding protein VTS1
Organism
tml
Tuber melanosporum
Brite
KEGG Orthology (KO) [BR:
tml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tml03019
]
GSTUM_00007890001
04131 Membrane trafficking [BR:
tml04131
]
GSTUM_00007890001
Messenger RNA biogenesis [BR:
tml03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
GSTUM_00007890001
Membrane trafficking [BR:
tml04131
]
SNARE
SNARE associated proteins
Others
GSTUM_00007890001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SAM_2
SAM_1
SAM_3
Motif
Other DBs
NCBI-GeneID:
9183616
NCBI-ProteinID:
XP_002839780
INRA:
GSTUM_00007890001
UniProt:
D5GHH8
LinkDB
All DBs
AA seq
627 aa
AA seq
DB search
MSNRNSTPDQGSGAGGSSLRPPSSRPLGSGHHLRASADMSGAFQSPLTGRIRPSSEIFLN
PPQITSQNAETEALDKAAREWINDLETYENTLDEMASAALDQDFKDELSAIEQWFRVLSE
AERTAALYALLQQTTQVQIRFFITVLQQMARSHPMSNILSPNTFEKDAMASRMSDAMSKM
NLGNARDSFSRPPPSPGAPPNRNSVVDPSVQSMFPDAAAAIAAQRALISGQAGSGSGTKS
NRNSALFESRPSSSLAPTPSISTPANKENNPPSSPWNRPTNDGGGEQSRPKSAADSMGNF
QLPPSSAGLRSPRNPPPQITGNTNLQTTTLNAPTATGIEMPQLSPYGDTSSGNWASMVNT
PVAPIFSQSPGADMVANAAAMKLAALSTVNNRIILDNDPKGWGKRRTGKDPNGSNGHGNA
GLNSPRNNGNMATLPQGAIAMYNEHGQLVPIPTAAAAAAMAQQQNNGSPLLGGRSRPNSP
GVFNSPAAQWGGLGFASPQAGGFLAAQSPLLGNNLLPTFGGLAGSAEGYNSDDVSGRGRS
PRGRRGSSKPPEDPTDPNLLNDIPAWLRSLRLHKYTDNLKDLNWKDLVELDDEALEKRGV
NALGARRKMLKVFDQVKEAKNEGKIPA
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaccggaacagcacaccggaccagggctcgggcgccggtgggtcctcacttcgt
cccccatcttcccgaccactcggctctggtcatcatttgagagcctcagcagatatgtcc
ggtgctttccaatcaccccttacaggtcggattcgtccttcctctgagatcttcctaaac
cctccccagattacctctcaaaatgcggagaccgaagcattggacaaggcagcacgagag
tggattaacgatttggagacatatgagaataccctcgatgaaatggcatctgcggcattg
gatcaggacttcaaagatgaacttagtgccatcgagcagtggttccgggtccttagtgaa
gctgagaggactgcggctctgtatgccctgttgcagcaaaccacccaggtccaaattcgg
ttcttcattactgttctacaacaaatggcaagatctcacccaatgtcgaacattttgtcc
cccaacacttttgaaaaagacgctatggcttctcgtatgagtgatgctatgagtaaaatg
aacctgggtaacgctcgtgactcgttctctcgccctccgccctccccaggagcaccgccg
aataggaactcggttgtggatccgtctgtgcagtcaatgttccctgacgccgctgctgct
attgctgctcagcgtgcgctgatctcgggccaggctggaagcggcagtggaacaaagtcc
aaccgtaatagtgcattatttgagtctcgtccatcctcatccttggctcctaccccttcc
atttcgaccccagcgaacaaggagaataacccaccttcctccccatggaaccgcccgaca
aatgacggagggggtgagcaaagccgccccaagtctgccgcagactctatgggcaacttc
caacttcccccatcgtctgctggactgaggtctccgaggaatcctcctcctcaaattact
ggaaacacgaaccttcagaccaccaccttgaacgcgcccacagctaccggtattgagatg
ccccaactttctccctatggtgatacatcatccggcaattgggcatcaatggtcaacaca
cctgttgcgccaatattttcgcaatcgccgggagcagatatggttgccaacgctgctgcc
atgaaattagctgcattgtctactgttaataaccggattatccttgataacgatcctaaa
ggatggggaaagcgcagaaccggaaaggatcctaatggaagcaacgggcatggcaatgcc
gggctcaattctcctcggaataacggaaatatggccaccttgccccagggcgctatcgct
atgtacaacgagcatggccaattggttccgattccgacggctgcggctgctgcagccatg
gcacaacagcagaacaatggctcgccgcttcttggaggccgctcccgcccgaactcgccc
ggcgtgttcaactcacccgccgcccagtggggcggtctaggatttgcctctcctcaagct
ggtggctttcttgctgctcaatcacccctcctcgggaataatcttctacccacattcggt
ggtctcgctgggtcggctgaaggttataattctgatgatgtcagtggacgcgggaggagc
ccgagaggcagacggggaagctctaagcctccagaggatccgaccgaccctaaccttctg
aacgacattcctgcctggttgcgtagtctccgtctccacaaatataccgataatttgaag
gatctcaattggaaagatttggtcgagttggatgacgaggcacttgagaagcgaggagtg
aatgctctcggagccaggagaaagatgctcaaggtgtttgaccaggtcaaggaagctaag
aatgagggcaaaatccctgcctag
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