Tuber melanosporum: GSTUM_00008038001
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Entry
GSTUM_00008038001 CDS
T01282
Name
(RefSeq) hypothetical protein
KO
K20184
vacuolar protein sorting-associated protein 41
Organism
tml
Tuber melanosporum
Pathway
tml04138
Autophagy - yeast
tml04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
tml00001
]
09140 Cellular Processes
09141 Transport and catabolism
04138 Autophagy - yeast
GSTUM_00008038001
04148 Efferocytosis
GSTUM_00008038001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tml04131
]
GSTUM_00008038001
Membrane trafficking [BR:
tml04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
GSTUM_00008038001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_Vps41
Beta-prop_Vps41
Clathrin
zf_RING_Vps8
zf-RING_Vps41
zf-RING_11
zf_RING_Vps8_fungal
zf-RING_5
zf-RING_2
WD40_like
zf-ANAPC11
PEP5_VPS11_N
zf-RING_UBOX
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
9183706
NCBI-ProteinID:
XP_002839861
INRA:
GSTUM_00008038001
UniProt:
D5GHM2
LinkDB
All DBs
AA seq
1201 aa
AA seq
DB search
MSSSRPPRGVYRNGDAVSASLVFGERMVIGTHNGNIHILSLPSLNSIRVYHAHSASITSI
SVSPPPPPPLPAQIRRFAAHQDRNIHVATSAIDGLVCIVPLLPANPGNNSSAAPYSKSEI
TFKNFKRPIQSVALSPNFRTDRTFISGGLAGNLILSVAPPAGGGGGMAWMGLGGGSGKDT
VLHSGEGAISAISWSKESPRFVAWTNEQGIKIMRSHIVPPEIKKEEIAWKRISAIERPES
IPEELAAVHKPRLEWIDRRNLSEDDVDGRTLSTADDISPTAVKGKPSIGTDWGQREKLLV
GWGGTIWVMDVFAGDGTGEEEKRAGWAEIVHILQTDCTISGLTLYSPSLVLLLAYLKEEK
PSSPEPGQASSSAGAGASPSSGSRTRRGRTNALTPELRFIDLNTSEEVSADELLMSRFEG
LAVGDYHLGVLPTNPPMTTRPPSASGEGDILGIGTASNYLWAAGMNATQIFSSAASVRSL
GSVSRRESFSNASASKASGSLSGLRGMKEKKEDVGWEEYPGKKIYITSPYDVVFATERSP
KDHLGWLLEKEKYKDAWELVDAQPDIISSDTASLSEYDEIERIVVDADASDPAYDSDSTI
SGGRHKVVQMSSAAEKEKRRIGELWLRSLIDVGDWTTAGAVCRKVLGVSGRWEHWVWVFE
AAGKIEEITPYIPSTPLSPPLPSVIYEIVLAHYLTHDRRRFQKLLVHDWRPEGSRSLYDP
RTIINAVERKLDNREDDVYEGDEDWIILQECLAKLFMAVAEPRNALKFYVILKNADEAFK
LIREFRLVDAVKDDILSFIKLRVSDEQMQNASIAELEGGTEEAIGLLVQEAGHGIVGPKM
VVRQLDDDKVAGGKLFLFFYLRRLWIGSAGDSSGMGGEGIGIGGGGILAEFGDLMVELFA
EYDRPLLMDFLKDSHSYSLEKASAVCERRNYIPELVHLLSKTGQTKRALFLIIDKLADVS
QAIAFAKTQDDPDLWNDLLDYSMDKPKFIRGLLENVGTTIDPITLVRRIPTGLEIEGLKA
ALGKILKEYGVQWSICDGVAKVLRSEVARGMEELRKGQRRGVKFEVAIERELHLSTEVEG
PATEVGGTVRDVELEREEIGLGVGGRYACGVCKVDFEPTEKDTLIAFACRHIFHVRCLVI
AHGSEADVPEVCGHGAEEEILGVMGRSVGTKVTHAALIRHRVQGGCVLCERKGGEDEFGL
F
NT seq
3606 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcttcgcgacctcccagaggggtatatcggaatggcgatgcggtatctgcgagc
ttggtctttggcgagaggatggttataggaacccacaacgggaacattcatatattatcg
ctaccatcactcaatagcatacgggtctaccatgcgcattccgcctcgataacctccatt
tcggtatcaccgcctccccctcctccactcccggctcaaatccggcgttttgccgctcac
caagaccgcaatatccatgttgcgacctctgctattgatggccttgtctgtatcgtaccc
ctccttcccgccaaccctggcaacaattcgtcagctgccccatattccaagtcagaaatt
accttcaagaatttcaaacgcccgattcaatcagtagcactgtcgccaaactttcgtacc
gatcgaacctttatatctggtggactagcggggaacctgattctctctgtggcacctcca
gcaggtggtggtggcggaatggcatggatggggttgggaggtggtagtggcaaggatact
gttttacattctggggaaggcgctatatccgcgatctcgtggagtaaagaatcgccgaga
tttgtggcctggacaaacgagcaggggattaagattatgagatctcatattgtaccgcca
gagatcaaaaaggaagagatcgcttggaagcgaatctcggcaatcgagaggccagaaagt
attcctgaggagttggcggcggttcacaaaccgagactcgagtggattgataggcgtaat
ttatctgaagatgatgtggatggccggaccctgagcaccgcagatgacatcagtcctaca
gcagtgaaagggaagccctcgattggaactgactgggggcaacgagagaagctcttggtt
ggatggggtggtacaatttgggttatggatgtttttgcgggagatggaacgggggaagag
gagaagcgggctgggtgggcagagattgtgcacatcttgcaaaccgactgcactatttct
ggcttgaccttgtatagcccatctcttgttctgctcctggcttaccttaaggaagagaaa
ccatcgtctcctgagcctgggcaggcctcttctagtgctggtgctggggcctccccgagt
tccgggtcccgcactcgccgtggacgaactaatgcacttactcctgagttgagattcatt
gatcttaacacgtcagaagaagtaagcgcggacgaattattgatgagcagattcgagggc
ctggctgttggtgattaccaccttggtgttttaccgactaacccacctatgaccactcgc
cctccttcagcttctggagaaggtgatattctcggtataggtaccgcaagcaattatttg
tgggctgcgggaatgaatgctacacagatattttctagcgcagcgagtgtgcgaagtctg
ggcagcgtgtctcgacgagaaagtttcagcaatgcgagtgcgagtaaggcctcgggaagt
ctttctggtctccggggaatgaaggagaaaaaggaagatgtcgggtgggaggaatacccg
ggcaaaaaaatctatattactagtccctatgatgtagtgtttgctactgagagaagccca
aaagatcatcttggatggctgttggagaaggaaaagtacaaggatgcgtgggaattagtc
gatgcgcagcccgacattatttcgtccgatactgcctctttaagcgagtacgatgagatt
gagcggattgtggttgatgctgatgcttcggacccagcctatgactctgattcaaccatc
agtggcggcagacataaggttgttcagatgtcctccgccgcggaaaaagaaaaacggaga
attggcgagttatggctgcggagcttgattgatgtcggtgactggactacggccggcgct
gtatgcaggaaagttttgggagtgtcaggaagatgggagcactgggtgtgggtgttcgaa
gcagctggaaaaatagaggaaatcacgccttacatacctagcacgccattatcaccgcca
ctgccaagcgtgatatatgagatcgttttggcgcattatctcacacatgatcgacggcga
ttccaaaagcttcttgtgcatgactggagaccggagggctcgaggtcgttgtacgatccc
cggactatcatcaatgccgttgagaggaagcttgacaaccgtgaagatgacgtttatgaa
ggagatgaggactggataatactgcaagagtgccttgcgaaattatttatggccgtcgcc
gagcccaggaatgcactgaaattctatgtcatactcaagaatgccgacgaggcattcaaa
ctcatcagggagttccgtcttgtcgatgctgtcaaggacgatatcctatctttcataaag
cttcgggtgtctgatgagcagatgcagaacgccagtatcgctgagttggaggggggaacg
gaggaggcgattggcttgttggtacaagaggctggacatggcattgttggaccgaagatg
gtggtgcggcagctagacgacgacaaggttgccggtggaaagttatttttgtttttttat
ctccgtcgattgtggataggtagtgccggagatagttctgggatgggtggagagggcatt
ggaattggaggaggaggaatattagcagaatttggagacttgatggtcgaattgtttgcc
gagtacgaccggccgttactaatggacttccttaaggacagtcattcatactccttagag
aaggcatctgcagtgtgcgagaggcgaaactatataccagagttggttcatctgctctct
aagaccgggcaaactaagcgtgcgctcttccttattatcgacaagttggccgatgtctct
caggctatagcatttgcaaagactcaggatgatccggatctttggaatgacctgttggat
tactctatggacaagccaaagtttattcgcgggctgcttgagaacgttggaaccactatt
gatccgatcactctagtaaggaggattccgacagggctagaaatcgaggggcttaaagcc
gccttaggaaagatcctgaaagagtacggcgtacaatggagcatctgcgacggagttgca
aaagtccttagaagcgaagtggcaagaggcatggaagagctccgcaaagggcagcgacgg
ggtgtcaaattcgaagttgcgatcgagcgagagcttcaccttagcaccgaggttgaaggc
ccagctactgaggtcggcgggacagttcgggatgttgaactcgagagggaggaaattggt
cttggtgttggcgggagatatgcatgtggagtatgcaaggtcgacttcgaacccacagag
aaagatactctcatagcttttgcctgccgacacatctttcacgtacgctgtcttgtgatt
gctcacggcagcgaggcggatgtgcctgaggtatgcggccatggtgcggaggaagaaata
ctaggtgtaatgggacgcagcgtggggaccaaagttacgcatgccgcccttatcagacac
agggtccagggcggctgcgtactttgtgaacggaagggaggcgaagacgaatttggttta
ttttag
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integrated database retrieval system
