Tuber melanosporum: GSTUM_00008050001
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Entry
GSTUM_00008050001 CDS
T01282
Name
(RefSeq) hypothetical protein
KO
K10609
cullin 4
Organism
tml
Tuber melanosporum
Pathway
tml03420
Nucleotide excision repair
tml04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
tml00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
GSTUM_00008050001
09124 Replication and repair
03420 Nucleotide excision repair
GSTUM_00008050001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tml04121
]
GSTUM_00008050001
03400 DNA repair and recombination proteins [BR:
tml03400
]
GSTUM_00008050001
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tml04147
]
GSTUM_00008050001
Ubiquitin system [BR:
tml04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Cullin
GSTUM_00008050001
DNA repair and recombination proteins [BR:
tml03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
GSTUM_00008050001
TCR (transcription coupled repair) factors
Cul4-CSA complex
GSTUM_00008050001
Exosome [BR:
tml04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
GSTUM_00008050001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
Motif
Other DBs
NCBI-GeneID:
9183712
NCBI-ProteinID:
XP_002839867
INRA:
GSTUM_00008050001
UniProt:
D5GHM8
LinkDB
All DBs
AA seq
873 aa
AA seq
DB search
MPEKVSDQETQSQGKKRKQNLQSPRPSQGFSQRSITDFFGDSTLGLDVPTSRPSSPKRSR
KNSEQPELPKDMSTPLNEQAWRRISENRVADLNGLPPHPRDPPNPNTNIVATKPPRPAPF
QPHAGAPRKLHIKNLRKPSKIDPDVYFNQTWGSLEAALAAIFGSRKISASLEELYRGTEN
ICRADRAGELYIRLKACCATYVGDYLKDSIIACNSWKDDAVKCVVSAWEKWNAQLGMIRS
VFLYLDRSYLLNNANPSLQPVEPTGLELFRHHIILAQEIETKFMDGIMALFERDRQQCSI
DASLLTRAVRMVDSLDLYETNFEPRFLAMSREYYDRLGILGATSNSLAEYLDECSQQLHK
EALRCERYRLDPPTKRSMGLILEEGLLKNQLLILTDQGSIEDLLQKQDHKSLATLYSLLD
RIGEPSSYLRLAWEKHILTVGRSIIEDESRENEMVQRLLELKDSLDSFVRVPFKGDDTLA
YALRESFGTFLNARTKDRSEMVNSKPAEMIAKYVDALLRGGAKGTSTGTPGDEDARLAHS
LEQVLDLFRFIQGKDVFEAFYKRDLARRLLMDRSASRDAERSMITKLKTECGSGFTQNLE
SMFKDIEISREAISHFKTTRNRAGNSPNVDLNVLVLSQSAWPTYDEVPVVIPLEMAQYLE
SYRNVYCEKHSGRKLMWRHALSHCVLRARFAPNVNKELVLSALQAVVLLLFNDAEFGTYL
SYQQIKGGTGLDDKQLIRTLQSLACAKYRVLQKETKGKDILPTDNFCVNRHFSAPKFRIK
INQIQLKETKKEKEDTFERVAQDRQYETQAAIIRIMKSRKKLRHNDLIQMTIDQTKNRGK
LDVPEIKKQIERLIDKDYMERLPGGETWYQYVA
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
atgccggagaaggtgtccgatcaggagacgcaatctcaaggcaaaaagcgcaaacaaaat
ttacaatcccctcggccgtcacaaggcttctctcagagaagtattaccgatttctttggg
gatagcaccttaggtttggacgtacctacctctcgcccaagcagtccaaaacgttcccga
aagaactcggaacagcctgagctcccaaaggacatgtcgactcctttaaacgagcaagcc
tggcgtcgcatcagcgagaacagggttgctgatctcaatggtctcccacctcaccctcga
gatccgccaaacccaaacacgaatatagttgcgactaagcccccgcgccccgccccgttt
cagcctcacgctggtgcacctcgcaaattacatataaagaatctgcgcaaaccttcgaag
attgacccggatgtctactttaatcagacttggggctctctggaagctgcactcgcagca
atctttgggagccgcaaaatatctgctagcttggaggagctgtacagaggcaccgaaaat
atatgtagagccgatagggccggtgagctctacattaggcttaaggcttgctgcgctacc
tacgttggtgactacctcaaggattctatcatagcttgcaatagctggaaagatgatgct
gtcaagtgtgttgtcagtgcttgggagaagtggaatgctcagctggggatgattagatcc
gtgtttttgtaccttgaccgttcttacctccttaacaatgctaatccgagtcttcagcct
gtggaacccaccgggctagaactctttcggcaccatataatactggcccaagaaatagaa
accaaatttatggatggaatcatggctctgttcgaacgcgatcgccagcaatgctcaatc
gacgcttctctgctcacacgtgccgttcgcatggtggatagtttagacctctatgagacg
aactttgagccccggttcctggccatgtctagagaatattacgaccgccttgggattcta
ggggcaacttctaactcccttgcggagtaccttgacgaatgctctcagcaattacacaag
gaggcattaagatgcgagaggtaccgcttggatccgcctacaaagcgatctatggggctt
atactcgaggagggattgttgaaaaaccaattacttatcctcactgatcagggaagtatc
gaggatcttttacaaaagcaagatcataaatccttggcgaccctttatagccttcttgat
cggataggggagccgagcagctatctaaggctggcatgggagaaacatatacttactgtg
ggtagaagtataatcgaggacgagagccgagaaaacgaaatggtgcagcggcttttagag
cttaaggatagcctagattcttttgttagggtgccgttcaagggtgacgatacgttggct
tatgctttgagggagtcgtttggaacattcctcaatgcgcgcaccaaggatcgatcagag
atggtgaattcaaagccggctgaaatgattgcgaaatatgtcgatgcgctgctaagaggg
ggtgccaaaggaacctctacagggacgcctggtgatgaagatgctaggttggcccattcg
ctggagcaggtccttgacctgttcaggttcatccaggggaaagatgtgtttgaagcgttt
tacaagagggatcttgcaaggaggctattgatggatagaagcgctagtcgagatgctgaa
cggagcatgataaccaaattaaaaaccgagtgcggatccggattcactcaaaacctagag
agcatgttcaaagacattgaaatatctcgagaggcgatttcgcatttcaaaacgacaagg
aaccgcgcggggaattctccaaatgtagatctcaacgttctagtactttctcagtcagca
tggccaacctatgacgaggtgccggtagttattccacttgagatggcgcaatatctagaa
tcctatagaaatgtctactgcgaaaaacatagtggaaggaagctcatgtggagacacgcg
ttgtcacactgtgttctaagggcgagatttgcaccgaatgtgaacaaggagctagttttg
agcgccctccaagcagtagtcctcctactatttaatgatgcggaatttggaacctacctc
tcataccaacaaattaaaggaggcaccggactagacgacaaacagctaattcgcaccctc
caatccctcgcgtgtgctaaataccgcgttctccagaaggagacgaaggggaaggacatc
ctcccgacagacaacttctgcgtaaaccggcacttctcggcacccaaattccgcatcaaa
atcaaccagatccagctcaaagaaacgaaaaaggagaaagaagacacctttgaacgcgta
gcccaggacaggcagtacgagactcaggctgccatcatccgcattatgaagagcaggaag
aagttgaggcataacgacttgattcagatgacaattgatcagaccaagaatcgggggaag
ttggacgttccggaaatcaagaagcagattgagaggttgatcgacaaagactatatggaa
cgcctccccgggggggagacttggtatcagtatgttgcttga
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