KEGG   Tuber melanosporum: GSTUM_00008059001
Entry
GSTUM_00008059001 CDS       T01282                                 
Name
(RefSeq) hypothetical protein
  KO
K14297  nuclear pore complex protein Nup98-Nup96
Organism
tml  Tuber melanosporum
Pathway
tml03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:tml00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    GSTUM_00008059001
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tml03019]
    GSTUM_00008059001
   03036 Chromosome and associated proteins [BR:tml03036]
    GSTUM_00008059001
Messenger RNA biogenesis [BR:tml03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     GSTUM_00008059001
Chromosome and associated proteins [BR:tml03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    GSTUM_00008059001
SSDB
Motif
Pfam: Nup96 Nucleoporin2 Nucleoporin_FG Nup98_GLEBS
Other DBs
NCBI-GeneID: 9183719
NCBI-ProteinID: XP_002839874
INRA: GSTUM_00008059001
UniProt: D5GHN5
LinkDB
AA seq 1995 aa
MFGSGPSSGTGGGFGGFGTNNNNQTGTTGGSVFGSGTGFGQPAATGFGATNNAAASPFGT
SKPFGGTTQPGTGGLFGGGNSSNTTAGGTGFGFGATNNTSNVFGGGNTAAAGGSGLFGNS
KPAFGPTTTTAGATSGLFGTANSGTGGVFGGGANTGIGFSSGTAQGPLTGTANPPYTAFT
EKEAQGGATNHFQTITFMPAYRNWSLEELRLQDYVQGRRYGTDSGNSGAFGQGTQFGAAF
GATSGNNTSGFGPTNNSATTGGGLFGGAANNNTASTPFGAANTGGGFGTGATQTGSGGLF
GASKPATGGLFGAPSNTTTTGGSGLFGAGANNTTTGAFGGSNTTGTFGATGATGATGGLF
GAANNNNQQAQKPFSFGNTGTGFGGGASNTAFNAQGNNATTTGGGLFGNTQSTAPAFGTT
QTGTGFGGTGGAFGTAGQNQGGAAFGGAFGNNPQAQPNKPFGTAFGATQATTATGGGGLF
GNNNQQQQQQNTGGLFGAGDNKQFGPPAISTGAQGGGLFGNNATATGGTAGGLFGGGQAT
QASQGGLFGGGTGANAGSVGLFGNNANKPPGSQGGGLFTNNGPPSSTSGGLFGGSALGGS
QLNTSTGGGFFNNQQQPQQQQQQIAGNGLFGSQFGNSLQGQQQQQQGFTASVMDSPYISP
VLNSSLGNVPNSPMGPIATPLSSSVQTKKAAMIPHYKIAPRQPSLAPRLGNSFSRSGSPF
AASSGSHATLGNSGSLGRSFSSTNKLHLFDGDDSILNSSSFTPNTSSRVASLKRLVIDKK
IRDQDLFSGGQDLRKDNSGGSDFAAKGGTKSILKKTVSFDIAASRRGEEELYGAGATSAK
GKETIGPTPTAEEMGFLRSTPERRRLREVEETSNGSSTSDAPVVGNEVAIISEKPKDDKS
PGTYWMVPNASKLKILPKEQQKRVMNLTIGRRGYGQVRFDNPVDISDIEDIDKIPGHIVL
FAQRVCTVYPETMPKPPPGKGLNVPATITLEDCFPVSKNERGKIRDPEHPRYVTHIRRLK
SIKDTEFVNYLASEGMWIFRVRHFTTYGLVESDDEEEDGDYTVDEPTMLPTGETPTPAKT
PGSSLWDGDEESSMDADVSGVDNTSSYDDTFDFKKFGSSAIVSGSKRDKHSTFLGRSDRE
TSYEESEEEGDVTMDQSFLGEGSVGSAEDVDEPAEPVSDQSEEEVDTTVVDETDGDVTGA
LVLANSDMLSPVKEYEEEDTITQDSPAKPLPMGQDWTEQLNNTISPKKRRFGGESFMAST
CKLANNPAKKFNIEPMSYGLLDLANDLYGGRASTINGTSTKGKGRATWDQVESPTSSRYQ
HENAWTATKNGESDAGTAGSDEKRWRNAIKPVWGKDGSIIYFGDLEGLERRRNYGNDLKL
AKLKYSIQNSESHGTPKPLELQLRATTIKRDEFNVPVAELRMDTLFHSFAQLSWSPDDPA
GQHEKSVWELASVLWDPIAGELALEEESQEMIEYMQETCRKERLSRFLEALVEAAADEHV
HGATTLEEVAIAHLTAHRVEQACASLLEAGDFRLANLITMVGGDAKLRSSIEKQLEQWKN
KGVLAEIPIPIRALYELLAGNTCYSEGVRGPPEDAAPNFFILDRFNLDWKRGFGLRLWYG
CADEEPIGKAVVDYETDMREYPEAVPAPKPWYHTEASPARDGAIDILWGLLKLYADRELN
LEEVLAPMNMTTSYIDYRLSWQLRTILARKGIRDFSGGKLHRRIDGLDEFIAGGMADQTT
IDFAGELETLGMWEWAIFVLLHLTDTDSRETAVRNVIGKHIDELKSAEGADVGRKLEFLE
KTLLIPKNWICEARALQARSAGEHSLEAEYLLAAQAWNEAHKTVVKKVAPEAVISGHLED
LKSILAKFEDVDLVDKWNLGGQIYLDYIHLQEYVLSGKPHLKNAPEQKGLPKSNSPKDLA
RRLLAGLKNADRKGFLQNIAVREMAGVVGSWVLKSEDMISEAPKLLELPLTEDQFLRKTV
NLGLAYYKARLQEAR
NT seq 5988 nt   +upstreamnt  +downstreamnt
atgtttggatctgggcctagcagtggcacgggtggaggttttggaggctttgggacgaat
aataataatcagaccgggactactggtggaagcgtgtttggcagtggaacggggtttggc
caaccggctgctacaggcttcggtgcgactaataacgcagcagcgtccccttttggtact
tctaaaccatttggcggaacgacccaacccggaacaggcggtctttttgggggtggtaat
tctagtaatacaacagctggcggtactggatttgggttcggcgctaccaataatacctct
aatgtatttggtggtgggaatacggcggccgctggtggaagcgggctcttcggaaactcg
aaaccagccttcggccctacgacaaccaccgcaggagctacgagtggcttgttcgggact
gccaactcgggcaccggaggtgtatttggggggggcgcaaatacagggattgggtttagc
tcggggactgctcaaggacctttaactgggacggcaaatcccccatacaccgcgtttacg
gagaaggaagcacagggtggtgcaacaaatcacttccagacaatcaccttcatgccggct
tataggaattggtcgttagaggaactgaggcttcaggattatgttcaaggccgccggtac
gggactgattcgggcaatagcggcgcattcggtcaaggaacccagtttggcgccgcgttt
ggagctaccagtggtaacaacacctcaggctttggaccgacaaataatagtgcgactact
ggcggaggccttttcggcggggcagctaataataacaccgcttctactccattcggggcg
gcaaacaccggaggtggttttggtactggtgctactcagacaggtagcggtggcctattt
ggtgctagtaagcctgctactggaggtcttttcggtgcccccagcaatactaccacaact
ggtggtagcggtttgtttggagctggtgccaacaacacaactactggggctttcggtgga
agcaatactactggcacatttggagcaacaggagctactggcgctactggcggcttgttt
ggtgctgctaacaacaacaaccaacaagcgcagaaacccttttcttttgggaacactggt
accggctttgggggtggtgcttcaaatactgccttcaatgcgcaagggaacaatgctacc
actaccggaggtggattattcggaaacactcagagcactgctcctgctttcgggacaaca
cagactggtaccgggtttggaggaacggggggtgctttcgggactgccggccaaaaccaa
ggtggagctgcctttggtggtgcatttggaaataatccacaggctcaaccaaataaacct
ttcggcactgcgttcggtgctacccaggctaccactgctacgggcgggggtgggctgttt
ggaaataataaccagcagcaacagcaacagaatactggtgggctgttcggcgctggcgac
aataaacaatttggtcctcctgccatttctactggagcccagggtggcggactattcggg
aacaatgctactgctactggaggcacggctggggggctgttcgggggtggccaagctacc
caggcttctcaaggtgggctgtttgggggcgggactggtgccaatgctggaagtgtgggg
ttattcggcaataacgccaacaagccgccaggctcacagggcggtgggcttttcacaaac
aatggacctccttcatcaaccagtggcggcctttttgggggctcggctcttggcggttcc
caactaaatacttctactggtggcgggttcttcaataatcagcaacaaccacaacaacag
cagcagcagatagctggcaatggtttgtttggtagtcagttcggaaatagtcttcaaggc
caacagcagcagcagcagggctttactgcatcagtcatggattcgccctatattagccct
gtgctcaattcatctttgggcaacgtaccgaactcccctatgggtcctattgctacccca
ctaagctctagtgtccagaccaagaaagctgccatgatcccccattacaaaatcgcgccc
aggcagccatctcttgcacctcgccttggaaatagcttctctcgaagcggctcacctttt
gccgcttcgtctggtagtcacgctactcttggtaatagtggaagtttggggcgctcgttt
tcatctaccaacaagctgcatttgttcgatggggatgactcgattctcaattccagctct
ttcacccccaacacctcgagtcgggttgccagtttgaagagattggtcatagacaagaag
ataagggatcaagacttgttttccggtgggcaagatcttcgaaaggataattctggtggc
tcggactttgcggccaagggtggaaccaagagtatacttaagaagactgtcagctttgat
atcgcagctagtcgcaggggcgaagaggagctgtatggtgcgggagctacttcagctaag
ggaaaggagacgattgggcccacccccacggccgaggagatgggtttcttgagaagtact
cctgagaggcggagattacgggaggttgaagaaacatcaaatggatcctccacgagtgat
gcgcccgttgtcggcaacgaggttgctattatctccgagaagccgaaggatgacaagtca
cctggaacgtactggatggtgcctaatgcgtcgaaattgaagattctgccgaaagagcaa
cagaaacgggttatgaatttgaccatcggacgccgcggctatggtcaagttagattcgac
aatcctgttgacatttctgatatcgaggatatcgacaagatccccggccatattgttctt
tttgctcaacgggtttgcaccgtttaccctgagactatgcctaaaccaccaccaggcaag
ggcctcaatgtgcctgctacgattaccctcgaggattgcttccctgtttccaagaacgag
cgcggcaagatcagagatcccgagcatcctcgttatgtcactcacatccgtcggttaaag
agcattaaggacaccgagttcgttaattaccttgcgagcgagggcatgtggatcttccgc
gtccgtcatttcactacatatggactcgttgagagcgatgacgaggaggaagatggtgat
tacaccgttgatgagccgacgatgcttcctactggcgaaactcccacccccgctaagact
cctggcagttctttatgggatggtgatgaggagagcagtatggacgctgatgttagcggt
gttgacaacacatccagctatgatgatactttcgatttcaagaaatttggttctagtgct
attgtgtcgggatccaagcgtgataaacacagcactttcttgggccgcagtgatagggaa
acgagttacgaagagtctgaagaggaaggagatgttactatggatcagtcttttttaggt
gaaggctccgtgggtagcgctgaggatgtggatgaacctgcggagcctgtgtcggaccaa
tcggaggaggaggttgataccactgttgtggatgaaacggacggagatgtaacgggagcc
ttggtgcttgccaactctgacatgttgagcccggtgaaggaatacgaggaggaagatacg
attactcaagattctcccgcgaagccattgcctatgggtcaggactggactgaacaattg
aacaacaccatcagtcctaaaaagaggaggtttggtggtgagagtttcatggcttctact
tgtaaacttgccaataacccggccaagaaattcaacattgagccaatgagttatgggtta
ttggatttggcaaatgatctttatggcggtcgggcgagcacgataaatggaacttctacg
aaaggaaaaggaagagcaacgtgggatcaggttgagtctcctacatcctctaggtatcag
cacgaaaacgcgtggacagcaacgaagaacggtgaaagcgacgctggcactgccgggtcg
gatgagaaacggtggcggaatgccataaagccagtttgggggaaggatggatctatcatt
tatttcggagacttggaagggttagaacggaggaggaattacggcaacgatttgaagctc
gcaaagctcaagtactctattcagaattccgagagtcatggcactcctaagcctttggaa
cttcaactccgagcgaccactatcaagagggacgaattcaatgttccagttgctgagctt
aggatggatacactctttcactccttcgcccagctcagctggagcccagacgatcctgcg
ggtcagcatgagaagagcgtttgggaacttgccagtgtgctctgggaccctatcgctgga
gaattggccttggaggaggagtcgcaggagatgattgagtacatgcaagagacttgccgc
aaggagagattatccaggttcttggaagctttggttgaagccgccgctgacgaacatgtc
catggtgccactacgctggaagaagttgccatcgcccatttgacagctcacagggtcgaa
caagcttgtgcttctcttcttgaagctggagatttcagacttgctaatttgattactatg
gttggcggggatgccaaactcagatcgtctatcgagaaacaactggagcagtggaagaac
aagggtgtgcttgcggagattccgattcctattagggctctttatgagttgcttgccggc
aatacttgttactcggaaggtgtccgcggccctccggaggatgccgctcctaactttttt
attctagatcggttcaatcttgactggaaacgtgggtttggactcaggttatggtacgga
tgtgccgatgaagagccgatcgggaaagcagttgtcgactacgaaacggacatgagagag
taccctgaggccgttcccgctcccaaaccctggtatcacacagaggcgagccctgcccgc
gacggtgcaattgatattctttggggcctgctgaagctctatgccgatcgcgagctcaac
cttgaggaagtcctcgcgccaatgaacatgaccaccagctatatcgactacagactcagc
tggcagctgcgtaccatccttgcaaggaagggcattagagacttcagcggtggaaagcta
cataggaggattgatggtctagacgaattcatcgccgggggcatggccgaccaaaccacc
atcgacttcgcgggcgagcttgagactcttggaatgtgggaatgggcaatcttcgtcctc
ctccaccttaccgacaccgacagccgtgaaacagccgtccgcaacgtcataggcaagcac
atagatgagctcaagtccgcggaaggcgccgatgtcgggaggaagctagaattccttgag
aagacacttctaatcccgaaaaattggatctgcgaggcccgcgccctgcaagcccgctcc
gccggtgagcactcactcgaggccgagtatctccttgccgcgcaagcctggaacgaagcg
cacaagaccgtcgttaagaaggttgcgccggaagctgtcatctctggtcatttggaagat
cttaagtccatcctcgccaaattcgaagacgtcgacctagtcgataagtggaacttgggt
ggccagatttacctcgactacattcaccttcaagaatacgtcctttctggcaagccacac
ctcaagaacgctcccgagcaaaagggcctaccaaaatcgaatagtccaaaagaccttgca
agacgcttgctcgcaggcctcaagaacgccgatagaaaggggtttctgcagaacatcgca
gtcagggagatggcaggcgttgtcggaagctgggtgcttaagagcgaggatatgatatcc
gaagctccgaagctcctagaactccccctcaccgaagaccagttcctccgcaagacggta
aatctgggactggcatattataaagcaaggttgcaggaggctaggtag

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