Tuber melanosporum: GSTUM_00008059001
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Entry
GSTUM_00008059001 CDS
T01282
Name
(RefSeq) hypothetical protein
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
tml
Tuber melanosporum
Pathway
tml03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tml00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
GSTUM_00008059001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tml03019
]
GSTUM_00008059001
03036 Chromosome and associated proteins [BR:
tml03036
]
GSTUM_00008059001
Messenger RNA biogenesis [BR:
tml03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
GSTUM_00008059001
Chromosome and associated proteins [BR:
tml03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
GSTUM_00008059001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nucleoporin_FG
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
9183719
NCBI-ProteinID:
XP_002839874
INRA:
GSTUM_00008059001
UniProt:
D5GHN5
LinkDB
All DBs
AA seq
1995 aa
AA seq
DB search
MFGSGPSSGTGGGFGGFGTNNNNQTGTTGGSVFGSGTGFGQPAATGFGATNNAAASPFGT
SKPFGGTTQPGTGGLFGGGNSSNTTAGGTGFGFGATNNTSNVFGGGNTAAAGGSGLFGNS
KPAFGPTTTTAGATSGLFGTANSGTGGVFGGGANTGIGFSSGTAQGPLTGTANPPYTAFT
EKEAQGGATNHFQTITFMPAYRNWSLEELRLQDYVQGRRYGTDSGNSGAFGQGTQFGAAF
GATSGNNTSGFGPTNNSATTGGGLFGGAANNNTASTPFGAANTGGGFGTGATQTGSGGLF
GASKPATGGLFGAPSNTTTTGGSGLFGAGANNTTTGAFGGSNTTGTFGATGATGATGGLF
GAANNNNQQAQKPFSFGNTGTGFGGGASNTAFNAQGNNATTTGGGLFGNTQSTAPAFGTT
QTGTGFGGTGGAFGTAGQNQGGAAFGGAFGNNPQAQPNKPFGTAFGATQATTATGGGGLF
GNNNQQQQQQNTGGLFGAGDNKQFGPPAISTGAQGGGLFGNNATATGGTAGGLFGGGQAT
QASQGGLFGGGTGANAGSVGLFGNNANKPPGSQGGGLFTNNGPPSSTSGGLFGGSALGGS
QLNTSTGGGFFNNQQQPQQQQQQIAGNGLFGSQFGNSLQGQQQQQQGFTASVMDSPYISP
VLNSSLGNVPNSPMGPIATPLSSSVQTKKAAMIPHYKIAPRQPSLAPRLGNSFSRSGSPF
AASSGSHATLGNSGSLGRSFSSTNKLHLFDGDDSILNSSSFTPNTSSRVASLKRLVIDKK
IRDQDLFSGGQDLRKDNSGGSDFAAKGGTKSILKKTVSFDIAASRRGEEELYGAGATSAK
GKETIGPTPTAEEMGFLRSTPERRRLREVEETSNGSSTSDAPVVGNEVAIISEKPKDDKS
PGTYWMVPNASKLKILPKEQQKRVMNLTIGRRGYGQVRFDNPVDISDIEDIDKIPGHIVL
FAQRVCTVYPETMPKPPPGKGLNVPATITLEDCFPVSKNERGKIRDPEHPRYVTHIRRLK
SIKDTEFVNYLASEGMWIFRVRHFTTYGLVESDDEEEDGDYTVDEPTMLPTGETPTPAKT
PGSSLWDGDEESSMDADVSGVDNTSSYDDTFDFKKFGSSAIVSGSKRDKHSTFLGRSDRE
TSYEESEEEGDVTMDQSFLGEGSVGSAEDVDEPAEPVSDQSEEEVDTTVVDETDGDVTGA
LVLANSDMLSPVKEYEEEDTITQDSPAKPLPMGQDWTEQLNNTISPKKRRFGGESFMAST
CKLANNPAKKFNIEPMSYGLLDLANDLYGGRASTINGTSTKGKGRATWDQVESPTSSRYQ
HENAWTATKNGESDAGTAGSDEKRWRNAIKPVWGKDGSIIYFGDLEGLERRRNYGNDLKL
AKLKYSIQNSESHGTPKPLELQLRATTIKRDEFNVPVAELRMDTLFHSFAQLSWSPDDPA
GQHEKSVWELASVLWDPIAGELALEEESQEMIEYMQETCRKERLSRFLEALVEAAADEHV
HGATTLEEVAIAHLTAHRVEQACASLLEAGDFRLANLITMVGGDAKLRSSIEKQLEQWKN
KGVLAEIPIPIRALYELLAGNTCYSEGVRGPPEDAAPNFFILDRFNLDWKRGFGLRLWYG
CADEEPIGKAVVDYETDMREYPEAVPAPKPWYHTEASPARDGAIDILWGLLKLYADRELN
LEEVLAPMNMTTSYIDYRLSWQLRTILARKGIRDFSGGKLHRRIDGLDEFIAGGMADQTT
IDFAGELETLGMWEWAIFVLLHLTDTDSRETAVRNVIGKHIDELKSAEGADVGRKLEFLE
KTLLIPKNWICEARALQARSAGEHSLEAEYLLAAQAWNEAHKTVVKKVAPEAVISGHLED
LKSILAKFEDVDLVDKWNLGGQIYLDYIHLQEYVLSGKPHLKNAPEQKGLPKSNSPKDLA
RRLLAGLKNADRKGFLQNIAVREMAGVVGSWVLKSEDMISEAPKLLELPLTEDQFLRKTV
NLGLAYYKARLQEAR
NT seq
5988 nt
NT seq
+upstream
nt +downstream
nt
atgtttggatctgggcctagcagtggcacgggtggaggttttggaggctttgggacgaat
aataataatcagaccgggactactggtggaagcgtgtttggcagtggaacggggtttggc
caaccggctgctacaggcttcggtgcgactaataacgcagcagcgtccccttttggtact
tctaaaccatttggcggaacgacccaacccggaacaggcggtctttttgggggtggtaat
tctagtaatacaacagctggcggtactggatttgggttcggcgctaccaataatacctct
aatgtatttggtggtgggaatacggcggccgctggtggaagcgggctcttcggaaactcg
aaaccagccttcggccctacgacaaccaccgcaggagctacgagtggcttgttcgggact
gccaactcgggcaccggaggtgtatttggggggggcgcaaatacagggattgggtttagc
tcggggactgctcaaggacctttaactgggacggcaaatcccccatacaccgcgtttacg
gagaaggaagcacagggtggtgcaacaaatcacttccagacaatcaccttcatgccggct
tataggaattggtcgttagaggaactgaggcttcaggattatgttcaaggccgccggtac
gggactgattcgggcaatagcggcgcattcggtcaaggaacccagtttggcgccgcgttt
ggagctaccagtggtaacaacacctcaggctttggaccgacaaataatagtgcgactact
ggcggaggccttttcggcggggcagctaataataacaccgcttctactccattcggggcg
gcaaacaccggaggtggttttggtactggtgctactcagacaggtagcggtggcctattt
ggtgctagtaagcctgctactggaggtcttttcggtgcccccagcaatactaccacaact
ggtggtagcggtttgtttggagctggtgccaacaacacaactactggggctttcggtgga
agcaatactactggcacatttggagcaacaggagctactggcgctactggcggcttgttt
ggtgctgctaacaacaacaaccaacaagcgcagaaacccttttcttttgggaacactggt
accggctttgggggtggtgcttcaaatactgccttcaatgcgcaagggaacaatgctacc
actaccggaggtggattattcggaaacactcagagcactgctcctgctttcgggacaaca
cagactggtaccgggtttggaggaacggggggtgctttcgggactgccggccaaaaccaa
ggtggagctgcctttggtggtgcatttggaaataatccacaggctcaaccaaataaacct
ttcggcactgcgttcggtgctacccaggctaccactgctacgggcgggggtgggctgttt
ggaaataataaccagcagcaacagcaacagaatactggtgggctgttcggcgctggcgac
aataaacaatttggtcctcctgccatttctactggagcccagggtggcggactattcggg
aacaatgctactgctactggaggcacggctggggggctgttcgggggtggccaagctacc
caggcttctcaaggtgggctgtttgggggcgggactggtgccaatgctggaagtgtgggg
ttattcggcaataacgccaacaagccgccaggctcacagggcggtgggcttttcacaaac
aatggacctccttcatcaaccagtggcggcctttttgggggctcggctcttggcggttcc
caactaaatacttctactggtggcgggttcttcaataatcagcaacaaccacaacaacag
cagcagcagatagctggcaatggtttgtttggtagtcagttcggaaatagtcttcaaggc
caacagcagcagcagcagggctttactgcatcagtcatggattcgccctatattagccct
gtgctcaattcatctttgggcaacgtaccgaactcccctatgggtcctattgctacccca
ctaagctctagtgtccagaccaagaaagctgccatgatcccccattacaaaatcgcgccc
aggcagccatctcttgcacctcgccttggaaatagcttctctcgaagcggctcacctttt
gccgcttcgtctggtagtcacgctactcttggtaatagtggaagtttggggcgctcgttt
tcatctaccaacaagctgcatttgttcgatggggatgactcgattctcaattccagctct
ttcacccccaacacctcgagtcgggttgccagtttgaagagattggtcatagacaagaag
ataagggatcaagacttgttttccggtgggcaagatcttcgaaaggataattctggtggc
tcggactttgcggccaagggtggaaccaagagtatacttaagaagactgtcagctttgat
atcgcagctagtcgcaggggcgaagaggagctgtatggtgcgggagctacttcagctaag
ggaaaggagacgattgggcccacccccacggccgaggagatgggtttcttgagaagtact
cctgagaggcggagattacgggaggttgaagaaacatcaaatggatcctccacgagtgat
gcgcccgttgtcggcaacgaggttgctattatctccgagaagccgaaggatgacaagtca
cctggaacgtactggatggtgcctaatgcgtcgaaattgaagattctgccgaaagagcaa
cagaaacgggttatgaatttgaccatcggacgccgcggctatggtcaagttagattcgac
aatcctgttgacatttctgatatcgaggatatcgacaagatccccggccatattgttctt
tttgctcaacgggtttgcaccgtttaccctgagactatgcctaaaccaccaccaggcaag
ggcctcaatgtgcctgctacgattaccctcgaggattgcttccctgtttccaagaacgag
cgcggcaagatcagagatcccgagcatcctcgttatgtcactcacatccgtcggttaaag
agcattaaggacaccgagttcgttaattaccttgcgagcgagggcatgtggatcttccgc
gtccgtcatttcactacatatggactcgttgagagcgatgacgaggaggaagatggtgat
tacaccgttgatgagccgacgatgcttcctactggcgaaactcccacccccgctaagact
cctggcagttctttatgggatggtgatgaggagagcagtatggacgctgatgttagcggt
gttgacaacacatccagctatgatgatactttcgatttcaagaaatttggttctagtgct
attgtgtcgggatccaagcgtgataaacacagcactttcttgggccgcagtgatagggaa
acgagttacgaagagtctgaagaggaaggagatgttactatggatcagtcttttttaggt
gaaggctccgtgggtagcgctgaggatgtggatgaacctgcggagcctgtgtcggaccaa
tcggaggaggaggttgataccactgttgtggatgaaacggacggagatgtaacgggagcc
ttggtgcttgccaactctgacatgttgagcccggtgaaggaatacgaggaggaagatacg
attactcaagattctcccgcgaagccattgcctatgggtcaggactggactgaacaattg
aacaacaccatcagtcctaaaaagaggaggtttggtggtgagagtttcatggcttctact
tgtaaacttgccaataacccggccaagaaattcaacattgagccaatgagttatgggtta
ttggatttggcaaatgatctttatggcggtcgggcgagcacgataaatggaacttctacg
aaaggaaaaggaagagcaacgtgggatcaggttgagtctcctacatcctctaggtatcag
cacgaaaacgcgtggacagcaacgaagaacggtgaaagcgacgctggcactgccgggtcg
gatgagaaacggtggcggaatgccataaagccagtttgggggaaggatggatctatcatt
tatttcggagacttggaagggttagaacggaggaggaattacggcaacgatttgaagctc
gcaaagctcaagtactctattcagaattccgagagtcatggcactcctaagcctttggaa
cttcaactccgagcgaccactatcaagagggacgaattcaatgttccagttgctgagctt
aggatggatacactctttcactccttcgcccagctcagctggagcccagacgatcctgcg
ggtcagcatgagaagagcgtttgggaacttgccagtgtgctctgggaccctatcgctgga
gaattggccttggaggaggagtcgcaggagatgattgagtacatgcaagagacttgccgc
aaggagagattatccaggttcttggaagctttggttgaagccgccgctgacgaacatgtc
catggtgccactacgctggaagaagttgccatcgcccatttgacagctcacagggtcgaa
caagcttgtgcttctcttcttgaagctggagatttcagacttgctaatttgattactatg
gttggcggggatgccaaactcagatcgtctatcgagaaacaactggagcagtggaagaac
aagggtgtgcttgcggagattccgattcctattagggctctttatgagttgcttgccggc
aatacttgttactcggaaggtgtccgcggccctccggaggatgccgctcctaactttttt
attctagatcggttcaatcttgactggaaacgtgggtttggactcaggttatggtacgga
tgtgccgatgaagagccgatcgggaaagcagttgtcgactacgaaacggacatgagagag
taccctgaggccgttcccgctcccaaaccctggtatcacacagaggcgagccctgcccgc
gacggtgcaattgatattctttggggcctgctgaagctctatgccgatcgcgagctcaac
cttgaggaagtcctcgcgccaatgaacatgaccaccagctatatcgactacagactcagc
tggcagctgcgtaccatccttgcaaggaagggcattagagacttcagcggtggaaagcta
cataggaggattgatggtctagacgaattcatcgccgggggcatggccgaccaaaccacc
atcgacttcgcgggcgagcttgagactcttggaatgtgggaatgggcaatcttcgtcctc
ctccaccttaccgacaccgacagccgtgaaacagccgtccgcaacgtcataggcaagcac
atagatgagctcaagtccgcggaaggcgccgatgtcgggaggaagctagaattccttgag
aagacacttctaatcccgaaaaattggatctgcgaggcccgcgccctgcaagcccgctcc
gccggtgagcactcactcgaggccgagtatctccttgccgcgcaagcctggaacgaagcg
cacaagaccgtcgttaagaaggttgcgccggaagctgtcatctctggtcatttggaagat
cttaagtccatcctcgccaaattcgaagacgtcgacctagtcgataagtggaacttgggt
ggccagatttacctcgactacattcaccttcaagaatacgtcctttctggcaagccacac
ctcaagaacgctcccgagcaaaagggcctaccaaaatcgaatagtccaaaagaccttgca
agacgcttgctcgcaggcctcaagaacgccgatagaaaggggtttctgcagaacatcgca
gtcagggagatggcaggcgttgtcggaagctgggtgcttaagagcgaggatatgatatcc
gaagctccgaagctcctagaactccccctcaccgaagaccagttcctccgcaagacggta
aatctgggactggcatattataaagcaaggttgcaggaggctaggtag
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integrated database retrieval system