Tuber melanosporum: GSTUM_00008210001
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Entry
GSTUM_00008210001 CDS
T01282
Name
(RefSeq) hypothetical protein
KO
K13210
far upstream element-binding protein
Organism
tml
Tuber melanosporum
Brite
KEGG Orthology (KO) [BR:
tml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tml03019
]
GSTUM_00008210001
03041 Spliceosome [BR:
tml03041
]
GSTUM_00008210001
Messenger RNA biogenesis [BR:
tml03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
GSTUM_00008210001
Spliceosome [BR:
tml03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
GSTUM_00008210001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KH_1
KH-I_KHDC4-BBP
KH_2
KH_KhpA-B
KH_Vigilin
Motif
Other DBs
NCBI-GeneID:
9184781
NCBI-ProteinID:
XP_002839950
INRA:
GSTUM_00008210001
UniProt:
D5GHZ8
LinkDB
All DBs
AA seq
574 aa
AA seq
DB search
MADQNVAALLAALTSAQRPPGSQGGPPLPQGGPAGYAGIPAGLTGQPPSQSVASPPVGYS
LPQPSASGSLDLSNIKPTTSGKVSLDDALARAKARAAEMGIQPTYREQAPTRYEDPRSRY
GARRSRSRTRSPPSRRGGEPFRDAYNPFRDERRARASAEYGMRERERSYSPPRRGGPPGA
GTGNPYSPPPARAERYGGGHRARSPPPDAEQMNIESSLVGLIIGRGGETLRRVEQETGAR
VQFLTNGQDRDSGGERVCNIQGTRPQISAARRAIEQIIAENGPPGGGMAGPSGSTSGRGK
FGGSGGQPNLRDGEDSIQILVPDRTVGLIIGRGGETIRDIQDKSGCHVNIVGEAKSQNGQ
RPVNLIGSPQAAEDAKRLIMEIVESDNAGTGPPPGILTETIRVPIDAVGMIIGKGGETIK
DMQSSTGCRINVSSQFQQGDPEREIALAGTREAIARARIAIEEKVEASTRSAPPTRPAHF
STDQQQQSQQPTWPTYALPQPSSNSPPAPSTSNTTATAATGTGGAPPGIPGAAQDDPYAP
YGGYQAYCAMYYAVVMQQQQQQQQQSQGGAAPGT
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atggcggatcagaatgtcgccgctctcctcgctgccctgacaagcgcacagcgacccccc
ggatctcaaggaggaccgccattgccgcaaggtggccctgcgggatacgctggaattccg
gcaggtctgaccggtcagccgccttcacaatctgtggcctctcctccggttggctactct
ttaccgcagccatctgcctccggttctcttgaccttagcaatatcaaacctacaacgtcc
ggaaaggtatctctggatgacgcactcgcgcgagcaaaagctagagctgcggagatggga
atccaacctacttacagggagcaagcacccacacgctatgaggacccacggtcaagatac
ggtgctcgtcgttcccgatcccgtactcgctccccgccctctcgtcgtggcggtgaaccc
ttcagagatgcctacaaccccttccgcgacgagcgtcgtgcgcgcgctagcgccgagtac
ggtatgcgcgagcgagaacgttcttatagtccaccgcggcggggcggtccgcctggggca
ggcacgggaaatccttactccccacctccggcacgagccgagaggtacggcggcggtcat
agagcgcgctcacctcctccggatgccgaacagatgaacattgaatcatcacttgttgga
ctgatcatcggccgcggtggggagactctgaggcgtgtggagcaggagaccggagctcga
gttcaattccttacaaacggccaggatcgggatagcggtggtgaacgggtctgcaatatc
cagggcacacgcccgcaaatttcggccgcaagaagggccatagagcagatcattgcggag
aatggtccacccggaggtggcatggcaggcccttccggaagtaccagtggtcgggggaaa
ttcggtggaagcggaggtcagcccaacttgcgagacggagaagatagcatacagatactt
gtgcccgatagaactgttggcttgataattggtcgtggtggcgaaactatccgcgacatt
caagacaagtctggctgtcacgttaacattgttggcgaggcaaagagtcagaatggccag
cgtcctgttaatctgattgggtcgccccaagcggcagaagatgcaaaacggttgatcatg
gaaattgttgagagcgataacgcaggtaccggaccaccgccaggaatattaactgaaact
attagggtccctatagatgctgttggcatgattattgggaaaggcggagaaacgatcaaa
gatatgcaatcctcgactggctgccgtatcaacgtctccagtcaattccaacaaggtgac
cctgaacgtgaaattgccttagcagggacccgcgaagcaatagcccgtgcacgcattgcc
attgaggaaaaggtcgaagcatctacacgcagtgcccccccaacccgtcccgcacacttc
tccaccgaccaacaacagcaatctcagcaaccaacctggccaacctacgccctcccacag
ccctcctctaactctccccccgccccatcaacctcaaacactactgccaccgccgccacc
ggcacaggaggagcaccgccaggcatcccgggcgcagcccaggacgatccgtatgcccca
tatggcggatatcaggcctactgcgcaatgtattacgccgtggttatgcagcaacaacag
cagcagcagcagcaatcgcagggtggtgctgccccaggcacttag
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integrated database retrieval system
