Tuber melanosporum: GSTUM_00008435001
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Entry
GSTUM_00008435001 CDS
T01282
Name
(RefSeq) hypothetical protein
KO
K11644
paired amphipathic helix protein Sin3a
Organism
tml
Tuber melanosporum
Pathway
tml04139
Mitophagy - yeast
Brite
KEGG Orthology (KO) [BR:
tml00001
]
09140 Cellular Processes
09141 Transport and catabolism
04139 Mitophagy - yeast
GSTUM_00008435001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tml03036
]
GSTUM_00008435001
Chromosome and associated proteins [BR:
tml03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
GSTUM_00008435001
REST complex
GSTUM_00008435001
Heterochromatin formation proteins
Other heterochromatin formation proteins
GSTUM_00008435001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sin3a_C
PAH
Sin3_corepress
PAH_ZNF598
HHD_RTEL1
Motif
Other DBs
NCBI-GeneID:
9184635
NCBI-ProteinID:
XP_002840086
INRA:
GSTUM_00008435001
UniProt:
D5GID4
LinkDB
All DBs
AA seq
1394 aa
AA seq
DB search
MQPAPGASPHGPSPPVPGSSASPPQQRDAPQGPPPGPTQPAQQGMAQSQRPGLQGAGPQQ
PSNIMQTSPATGQTQMPLLTTQGPHPSQQQPQQQQQQGPMGTVHHPMSSLTVGHPQQADS
RPPQHQPGTNSVSQAQSQAQQAAASMPPSAAGPGSGPGGPILNVGGPLPTAPPSRPLPFD
ILPSTAERDFDSRRASSSLGFQGAHGHLNVKDALSYLDQVKFQFQDQPDVYNKFLDIMKD
FKSQTIDTPGVIDRVSTLFSGHPSLIQGFNTFLPPGYRIECSQDPRDTKITVTTPSGIHH
AASGGEVSIGGDRSGMQLNTAPLAAGPVEFNHAISYVNKIKNRFAQQPDIYKNFLEILQT
YQRESKPIQDVYSQVTQLFHSAPDLLEDFKQFLPESAAQARAAAAAKAAADEAAGHTGHL
GPNGPPGPGGAPSASRLPPVGNFPPPPSVGKENKKKRGAQGLSTVQEPKAENNSVNGTSN
ASRGNKRHKVGHPAKPSVAEQLVAVSPTLIPFHPEPLGPQPQPMATTEELAFFDRVKKFI
GNKQTYNEFLKLLNLFSHDLIAKDMLVDKVSNFISGNKELMDWFKRFVGYDGKADDLIDN
APSTVNKVRLNLCRGLGPSYRLLPKLEAQKPCSGRDEMCWEVLNDQWASHPTWASEDSGF
VAHKKNQYEDILHRIEEERHDYDFNIEANSRTIQLLEPIAQRIANMTPEEKANFRLTPGL
GGQSKTIYQRIIKKVYDKEKGLEVIEMLHNNPVVTVPIVLKRLKSKEEEWKAAQREWQRV
WRDQTAKVFWKSLDHQGITVKANDKKAFSTKALVNDIQAKYKSQDVRRQSSTTPIAEHQF
TYMFGDFGIILDASRLLAVSLEHSNTFSANDREKIDYFIKSFIPLFFGMNSRDVEDTVNS
IARKSPDDDGDEGSPAAGEGSTRAARRGRQDDLLKDVLKRGTGKNGKSSRKDKEGSVASR
GSKESTPEVNQNDSDIEMALDGPSDRPIKEEQHWISRPTKHLPDMKPGTPVSHADETSLP
VKRTLFTLYANTTIYCFFRTFQILCKRLSDIKACEEEIRNDVAIRRQQKAAHDLHLLGSS
SVPGSSKMEELFSDTSPNANYYSQVLDHCEKFIEAELDSNTFEEGLRSVYVQKGWQLYTI
DKLLLAILRFIQVIVPNDTKEKSSDKGGNADIIRLFKCDRERREFTKERGEYQELISYRR
SIEKMLAPEDSVYRIDWNEENKEAAIRYVPRNEMTIANELDKDERWNYYIQTYMMCAPTE
GIPLGRCDKVFLARNRPSEDDLPEDGSPREMIGSSAADGFCNEENMEIRICVNTYRLFFA
QNTEDFMVQRRSQRLAGESKMQAVSGKRINKWHDFLSNAPWMQGMSQEEVERKKAEWEVA
KKNGQPTDVVMGGA
NT seq
4185 nt
NT seq
+upstream
nt +downstream
nt
atgcagccagctcccggcgcatccccacacggcccctcccctcctgttcccggaagcagc
gctagccccccacaacaacgtgatgctcctcaaggtcctccacccggtcctactcaaccg
gcccaacaaggtatggcccaatctcaacgaccaggtttacagggtgcaggccctcaacag
ccctcaaatattatgcaaacttctccggctactggccaaacccagatgccacttttaact
acacagggaccccatccatcccagcaacagccccagcagcagcaacagcaagggcctatg
gggaccgtccaccacccaatgtctagtttgactgtcgggcacccccagcaagccgattcc
cggcccccccagcaccaaccaggcaccaactctgtaagtcaagcccagagccaagctcaa
caggccgcggcctcgatgcccccatccgcagccggacccggcagtgggcctgggggcccc
attttaaatgtaggaggccccctaccaaccgctcctccttcccgcccccttccctttgat
atcttgccttccactgcggagcgagatttcgacagtcgcagagcctcttcttctttgggt
tttcagggtgctcatggtcatttgaatgtaaaggatgccttatcctacttggatcaagta
aagtttcagttccaagatcaaccagatgtgtacaacaagtttctggatatcatgaaggac
tttaagagtcaaacaatcgacacacccggggttattgacagagtttcgacactcttcagc
ggtcatccgagcctgatccagggatttaataccttccttccccccggatacaggatcgaa
tgctctcaggatccacgagatactaaaatcaccgtcacgactccctcgggaattcaccac
gctgcttcgggtggcgaggtctcaattggaggtgataggagtgggatgcagttgaatact
gctccattggctgctggtccagtagaatttaaccacgcaattagctatgtgaataagata
aagaatcgattcgcgcaacaaccagatatatataagaactttttagaaattcttcagacc
tatcaacgggaatcaaaacccatccaagatgtttattctcaagttactcaattgttccac
tcggcgccggacctcttagaagactttaaacagtttctccccgaatccgctgctcaggct
cgtgcggcagcggcggcgaaagctgctgctgatgaggcagccggtcatactgggcattta
ggcccgaatgggcctcctgggcctgggggggcgcctagtgcatcaaggctacctccggtg
ggaaattttccgcctcctcctagcgttggaaaggagaacaagaagaagcgtggtgcccaa
ggacttagcactgtccaggaacctaaggccgagaataacagtgtgaacggcacctcaaac
gcatcaagaggtaacaagagacataaggtcggccaccctgccaaaccttctgttgctgaa
caactggttgccgtctcgcctacgttaatacctttccaccccgaacctcttggaccgcaa
ccacagcccatggcgaccactgaggagcttgcgttctttgatcgcgttaagaagttcatt
ggaaacaaacaaacgtacaacgaatttctcaagctcctgaatcttttttcccatgaccta
attgcgaaagatatgcttgtcgataaggtatctaacttcatcagtggcaacaaggagctg
atggactggttcaagagatttgttggctacgatgggaaagcggatgacttaatcgacaac
gctcccagcacagtcaataaggttaggttgaatctttgtcgtgggcttggccctagttat
agattgctgccgaaactggaagctcaaaaaccttgcagtggtagggacgagatgtgttgg
gaagtccttaatgatcaatgggcttctcacccgacatgggcttcggaggattccgggttt
gttgcgcataagaagaatcagtacgaggacattcttcacagaattgaggaggagcgccac
gactatgatttcaatatcgaagccaattcgaggactatacagcttcttgaaccgattgcc
cagcgaatagcaaatatgacgccagaggagaaggcgaatttccgcctaacccccggtctg
ggcggacaaagtaaaacaatatatcagcgtatcatcaaaaaggtctacgataaggaaaag
gggctggaggtgatcgaaatgcttcacaacaatccggtcgtaactgtaccgattgtattg
aaacgcctcaagtcaaaagaagaggagtggaaggctgcccagagggagtggcaaagggta
tggcgtgatcaaacggccaaggtgttttggaagagtttggaccaccagggcatcacggtt
aaggcgaatgataagaaagctttcagtacgaaagcgttggtgaatgatattcaggcgaag
tacaagtcacaggatgtcagacgccagagctctacaacacctatagccgaacatcaattc
acatacatgttcggagactttggcatcatccttgatgctagccgtctcttagctgtttct
ttggagcatagcaacacctttagcgccaacgaccgcgagaagattgactatttcatcaag
tcttttatcccgctgtttttcggtatgaactcaagggatgttgaggacactgtcaacagc
atcgcacgtaagtcacccgacgatgatggtgacgaagggtcgcccgcggccggagagggt
tcaactcgagcggcgcgccgcggcagacaggacgacttgctcaaagacgttctcaagcgc
ggcactggcaagaatggaaagagctccaggaaagataaggaagggagtgtcgcctctcgc
ggaagcaaggagtccactccggaggtgaaccagaatgatagcgacattgagatggcactt
gatggaccttcggatcgaccgatcaaagaagaacagcattggatatcgaggcctacaaag
cacctcccagatatgaaacctggcactccagtatcccatgctgatgaaacatcacttccc
gtcaagagaaccctgttcaccctatatgcgaatacaaccatctattgtttcttccgcaca
ttccaaatactttgcaaacgtctgtcggacattaaggcctgtgaagaggaaattcgcaac
gatgttgccattcgaagacagcagaaggcagctcacgacctgcacttgctgggttccagt
agtgttcctggctcctccaaaatggaagagcttttcagtgatacaagcccgaacgcgaat
tactactcacaagtccttgatcactgcgagaagtttatcgaagccgaactcgactcaaat
acgtttgaggaagggcttagatctgtctatgtacagaaggggtggcaactctacaccatt
gacaagctgttgttagccattttgaggtttatccaggttatcgtgccaaacgacaccaaa
gagaagagctctgacaagggcggaaatgccgatatcatcagactgttcaagtgtgataga
gagcgcagagaattcaccaaagaacgtggtgaataccaggagctgattagttatcggaga
agtatcgagaagatgctcgcgcctgaagatagtgtttatcgaatcgactggaacgaggaa
aacaaggaagcggccatccgatatgttccaagaaacgaaatgacgattgctaacgaactc
gataaagacgagcgctggaattactacatccagacatatatgatgtgcgcaccgacagag
ggcattccgttgggaagatgtgacaaagtgttcttagcaagaaataggccttcggaggac
gacctcccggaagacggctcccctcgcgagatgattggcagctcggcagcagatggcttc
tgcaacgaagagaacatggagatacgaatatgcgtgaacacataccgcttgttcttcgcg
cagaataccgaagactttatggtgcagaggaggtcccagcggcttgctggggagagcaag
atgcaggctgtttcggggaaacggattaataagtggcacgacttcctgagcaatgctcca
tggatgcagggcatgtcccaggaggaggtcgagaggaagaaggcggaatgggaagttgct
aagaagaatggacagcccacggatgtcgttatgggaggtgcttga
DBGET
integrated database retrieval system