Tuber melanosporum: GSTUM_00008534001
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Entry
GSTUM_00008534001 CDS
T01282
Name
(RefSeq) hypothetical protein
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
tml
Tuber melanosporum
Pathway
tml00040
Pentose and glucuronate interconversions
tml01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tml00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
GSTUM_00008534001
Enzymes [BR:
tml01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
GSTUM_00008534001
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
9183278
NCBI-ProteinID:
XP_002840153
INRA:
GSTUM_00008534001
UniProt:
D5GIK1
LinkDB
All DBs
AA seq
318 aa
AA seq
DB search
MKFTATLLLSLLPAAFAAPAITLRKRASLSEAATVGYATLNGGTTGGAGGSTTTVSSLAA
LKTAAAKSGALNIVVQGTITGDDVVDVAADKTIVGADGKAVLQGVGLLIKDVKNVIIRNL
AVKEVLASTGDAIGIQKSNNVWIDHVDLSSNQDHDKDFYDGLLDVTHACDYITLSNNYLH
NHWKASLVGHSDTNESEDKGHLTVTYVGNYFHNLNSRGPSFRFGTGHIFNNYYENVSDGI
NTRQGAQLLVENNVFVGSNKPLYSTDAGYAVANGNDFGGGENAASAGTLNSMPYKYSLVA
AGSVKSSVVGTAGATLTF
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgaagttcaccgcaaccctcctcctctccctcctccccgcagcgttcgcggcccctgcc
attacactccggaagcgtgcctcactctccgaagcggcgacagtcggctacgcaaccctc
aatggcggcactaccggcggcgcgggcgggtccacgaccaccgtttcctcgctcgccgcg
ctcaagaccgcggcggccaagagcggggcattgaacatcgtcgtgcagggcactatcacg
ggggacgacgtggtggacgtggcggccgacaagactatcgtgggcgcggatggcaaggcc
gtgcttcagggtgtgggactcctgatcaaggacgtcaagaacgtcatcatccgcaacttg
gcggtgaaggaggtgctcgcgagcacgggggatgctatagggattcagaagagtaataat
gtttggattgatcatgtcgacttgagctctaatcaggatcatgacaaggatttctacgac
ggtctcttggacgtcacgcacgcatgcgactacatcactctttcaaacaactaccttcac
aatcactggaaggcctcgctcgtcggacactccgacaccaacgagtccgaggacaagggc
cacttgaccgtcacctacgttggcaactacttccacaatctcaactctcgtggtccctca
ttccgcttcggcacgggtcatatcttcaacaactattacgagaacgtctccgacggcatc
aacactcgccagggtgcccagctactcgttgagaacaatgtcttcgtcggctcgaataaa
cccctttactccaccgatgctggctacgctgttgccaacgggaatgactttggtggcggg
gagaatgctgcctctgcaggtacgcttaatagcatgccgtacaagtatagcctggtcgct
gctggcagtgttaagagttcggtcgttgggactgcgggtgctactttgaccttctga
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