Tuber melanosporum: GSTUM_00008655001
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Entry
GSTUM_00008655001 CDS
T01282
Name
(RefSeq) hypothetical protein
KO
K12589
exosome complex component RRP42
Organism
tml
Tuber melanosporum
Pathway
tml03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tml00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GSTUM_00008655001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tml03019
]
GSTUM_00008655001
Messenger RNA biogenesis [BR:
tml03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
GSTUM_00008655001
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
GSTUM_00008655001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
9185638
NCBI-ProteinID:
XP_002840229
INRA:
GSTUM_00008655001
UniProt:
D5GIS7
LinkDB
All DBs
AA seq
279 aa
AA seq
DB search
MAPLQTSQQTGTPLSPAELSYLHTSLTLTPPIRPDSRTPTQFRPLVAESDILPSTNGSAR
MIWGDGGECVVGVKAEVERNSATSVGPRDWIEINVEVSGQRDDDAFLGMTVAESLLVPGS
GVLERLVLGERFHWKVFVDILLLAPPLSHPATLLTLTTYLALRNTFLPKLISEVVEDPVF
DDDWDNALPLYPVGKIPPPITLLVVNVGENIFFDPTREELSAGDVVLAVSICGKKVVGVR
TLEGGSGGVGRAVVKRVIKESCEVAEEVFSNLNSVGEGD
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atggcgcccctgcaaacaagccaacaaacaggaactccgctatccccggcagagctctca
tacctgcacacctctctaacgctaaccccgcccatccgcccggactcccgcacaccgaca
cagtttcgcccactggtcgccgagtccgacatcctcccatcgaccaatggctccgcgcgc
atgatctggggcgacggtggggagtgcgtagttggcgtgaaagccgaggtggaaaggaac
tcggccacgagcgtaggcccgagggattggattgagatcaacgtggaagtatccggccag
cgcgacgacgacgccttcctaggcatgacagtggcggagagtctgctcgttcctggcagt
ggggttttggagaggttggttctgggtgagaggtttcattggaaggtttttgtcgatata
ttgctattggcgcccccgctatcacatcccgctactctgctcacgctcacgacatacctt
gctctccgtaacaccttcctgccgaaattgatctctgaagtcgtggaggacccagtcttt
gacgacgactgggataatgctctgcctttgtaccccgttggcaaaatccccccgccgata
accctgctggtggtcaacgttggcgagaacatattcttcgaccccacaagggaagaatta
tccgccggggatgtggttctcgccgtctcgatttgtggaaagaaggtcgttggcgtgagg
actctggaaggggggagtggaggtgttgggagggcagttgttaagcgggtcatcaaggaa
agttgcgaagtcgcggaggaggtatttagtaacttgaatagcgtcggtgaaggggattga
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integrated database retrieval system
