KEGG   Tuber melanosporum: GSTUM_00008710001
Entry
GSTUM_00008710001 CDS       T01282                                 
Name
(RefSeq) hypothetical protein
  KO
K13171  serine/arginine repetitive matrix protein 1
Organism
tml  Tuber melanosporum
Pathway
tml03013  Nucleocytoplasmic transport
tml03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:tml00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    GSTUM_00008710001
   03015 mRNA surveillance pathway
    GSTUM_00008710001
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tml03019]
    GSTUM_00008710001
   03041 Spliceosome [BR:tml03041]
    GSTUM_00008710001
Messenger RNA biogenesis [BR:tml03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     GSTUM_00008710001
Spliceosome [BR:tml03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   SR-related proteins
    GSTUM_00008710001
SSDB
Motif
Pfam: PWI
Other DBs
NCBI-GeneID: 9185672
NCBI-ProteinID: XP_002840263
INRA: GSTUM_00008710001
UniProt: D5GIW1
LinkDB
AA seq 457 aa
MDAKILKGTKFPPEYSKKVDMGKVNLEVMKQWISGKVIEILGNEDDVVIDFVYSLLEEER
IPDPKKIQINLTGFLEKDTPAFCKQLWGLLLSAQSNPQGVPMELLEKKKEELRREKAVVE
ERTEQQRRKREEEEGREREIANVRERERDTRRRVPLSTAGASPSSKDTRERGGDNYTEGK
GAPHINGAGDVVEEEVGIGSEAERQTHRSYNRYGRSRSRSRSRSRGGRDEYRARRPSPRY
SNSPDTRRNSELQHHYQRHRSHTPDYGRGGRRNHRDRRRGSVSSRDPSSSRSSYASTKSP
SRSPPPKRERGGSRRELSASRDRVDRREKRSSRGYAEETDSWRRRRHESEERSGRDARAS
KRRRSRSSDNDDNKNNKNRRGSPPRTRDRQAKSSTATAAGTTRVVEKEVGKDKELTPQQR
ENQLREQLLREKIKRSRQNSGSNGSGKGGIEGKDRTD
NT seq 1374 nt   +upstreamnt  +downstreamnt
atggacgcaaagattttgaagggtaccaagttcccaccggagtactccaaaaaggttgat
atggggaaggtgaatttggaggttatgaagcagtggatttccggcaaggtcatagagata
ttagggaatgaggatgatgtcgttattgattttgtatattcgcttttggaggaagagagg
attcctgatccgaagaagatacagatcaacctcacgggattcctggagaaggatactcct
gcgttctgtaagcaactctgggggcttctgttaagtgctcagtcgaatccgcagggtgtg
ccgatggagttgttggagaagaagaaggaggagttgcgtcgcgaaaaggctgtggtagag
gaacgcacagagcagcaacgtcgcaagcgtgaggaggaggaggggcgagaacgcgagatt
gctaacgtccgtgaacgtgaacgggatacccgtcgtagagtcccgctatcgacggcagga
gcatcaccatcatcgaaggataccagggagagaggaggagataactataccgaagggaaa
ggcgccccccacatcaacggggcgggggacgtcgtggaggaggaggtggggataggttca
gaggcggagagacagacacacaggagctacaacagatatggtcgttcccgctcgagatct
cggtcgcggtctcgtggcggacgggacgagtaccgtgccagacgcccttccccgcgctac
tcaaattccccggatacgcgcaggaacagtgagctgcagcaccattaccagcgacaccgg
tcccacactccggattacggcagaggaggtcggagaaatcatagggatagaagacggggt
agcgtatcttcccgtgatccttcctcgtctaggtcttcctatgcgtctactaagtctccg
tcgaggtctcctccccccaagagagagagaggagggagtaggagggagctttccgcttcc
agagatcgtgtggatcggagagagaagcggtcttcaagaggttatgctgaggagacagat
agctggcgtcgccgtcgtcacgaatcggaggagcggtccgggcgggatgcccgcgcatcc
aagagaaggcgatcgcggtcttccgacaacgacgacaacaagaataacaagaatcgtcgg
ggttcgcccccgcgcacccgggacagacaagcgaagagttctaccgctaccgccgctggc
actaccagagtagtggagaaggaggttgggaaggacaaggagttgacgcctcagcaacga
gaaaaccagctacgtgaacaacttctccgggagaagatcaagcggtcgagacagaatagt
gggagtaatgggagtggaaagggtggtattgaggggaaggaccgaaccgactga

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