Tuber melanosporum: GSTUM_00008710001
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Entry
GSTUM_00008710001 CDS
T01282
Name
(RefSeq) hypothetical protein
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
tml
Tuber melanosporum
Pathway
tml03013
Nucleocytoplasmic transport
tml03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tml00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
GSTUM_00008710001
03015 mRNA surveillance pathway
GSTUM_00008710001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tml03019
]
GSTUM_00008710001
03041 Spliceosome [BR:
tml03041
]
GSTUM_00008710001
Messenger RNA biogenesis [BR:
tml03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
GSTUM_00008710001
Spliceosome [BR:
tml03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
GSTUM_00008710001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
9185672
NCBI-ProteinID:
XP_002840263
INRA:
GSTUM_00008710001
UniProt:
D5GIW1
LinkDB
All DBs
AA seq
457 aa
AA seq
DB search
MDAKILKGTKFPPEYSKKVDMGKVNLEVMKQWISGKVIEILGNEDDVVIDFVYSLLEEER
IPDPKKIQINLTGFLEKDTPAFCKQLWGLLLSAQSNPQGVPMELLEKKKEELRREKAVVE
ERTEQQRRKREEEEGREREIANVRERERDTRRRVPLSTAGASPSSKDTRERGGDNYTEGK
GAPHINGAGDVVEEEVGIGSEAERQTHRSYNRYGRSRSRSRSRSRGGRDEYRARRPSPRY
SNSPDTRRNSELQHHYQRHRSHTPDYGRGGRRNHRDRRRGSVSSRDPSSSRSSYASTKSP
SRSPPPKRERGGSRRELSASRDRVDRREKRSSRGYAEETDSWRRRRHESEERSGRDARAS
KRRRSRSSDNDDNKNNKNRRGSPPRTRDRQAKSSTATAAGTTRVVEKEVGKDKELTPQQR
ENQLREQLLREKIKRSRQNSGSNGSGKGGIEGKDRTD
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atggacgcaaagattttgaagggtaccaagttcccaccggagtactccaaaaaggttgat
atggggaaggtgaatttggaggttatgaagcagtggatttccggcaaggtcatagagata
ttagggaatgaggatgatgtcgttattgattttgtatattcgcttttggaggaagagagg
attcctgatccgaagaagatacagatcaacctcacgggattcctggagaaggatactcct
gcgttctgtaagcaactctgggggcttctgttaagtgctcagtcgaatccgcagggtgtg
ccgatggagttgttggagaagaagaaggaggagttgcgtcgcgaaaaggctgtggtagag
gaacgcacagagcagcaacgtcgcaagcgtgaggaggaggaggggcgagaacgcgagatt
gctaacgtccgtgaacgtgaacgggatacccgtcgtagagtcccgctatcgacggcagga
gcatcaccatcatcgaaggataccagggagagaggaggagataactataccgaagggaaa
ggcgccccccacatcaacggggcgggggacgtcgtggaggaggaggtggggataggttca
gaggcggagagacagacacacaggagctacaacagatatggtcgttcccgctcgagatct
cggtcgcggtctcgtggcggacgggacgagtaccgtgccagacgcccttccccgcgctac
tcaaattccccggatacgcgcaggaacagtgagctgcagcaccattaccagcgacaccgg
tcccacactccggattacggcagaggaggtcggagaaatcatagggatagaagacggggt
agcgtatcttcccgtgatccttcctcgtctaggtcttcctatgcgtctactaagtctccg
tcgaggtctcctccccccaagagagagagaggagggagtaggagggagctttccgcttcc
agagatcgtgtggatcggagagagaagcggtcttcaagaggttatgctgaggagacagat
agctggcgtcgccgtcgtcacgaatcggaggagcggtccgggcgggatgcccgcgcatcc
aagagaaggcgatcgcggtcttccgacaacgacgacaacaagaataacaagaatcgtcgg
ggttcgcccccgcgcacccgggacagacaagcgaagagttctaccgctaccgccgctggc
actaccagagtagtggagaaggaggttgggaaggacaaggagttgacgcctcagcaacga
gaaaaccagctacgtgaacaacttctccgggagaagatcaagcggtcgagacagaatagt
gggagtaatgggagtggaaagggtggtattgaggggaaggaccgaaccgactga
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integrated database retrieval system