Tuber melanosporum: GSTUM_00009098001
Help
Entry
GSTUM_00009098001 CDS
T01282
Name
(RefSeq) hypothetical protein
KO
K18723
nucleoporin GLE1
Organism
tml
Tuber melanosporum
Pathway
tml03013
Nucleocytoplasmic transport
tml03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tml00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
GSTUM_00009098001
03015 mRNA surveillance pathway
GSTUM_00009098001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tml03019
]
GSTUM_00009098001
Messenger RNA biogenesis [BR:
tml03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
GSTUM_00009098001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GLE1
RE_BstXI
SCNM1_acidic
Motif
Other DBs
NCBI-GeneID:
9186770
NCBI-ProteinID:
XP_002840545
INRA:
GSTUM_00009098001
UniProt:
D5GJP3
LinkDB
All DBs
AA seq
556 aa
AA seq
DB search
MPLPDSDSEGEWEEGNSDADLFANSGGGIYSSPIRTASPRGAQSTCAVRAHNLAEKINAL
DLKAKEYSLASKLVATDDKANQEFMLVYLQDTRFDAREAAILEERFQAKVRRVYEAKRQD
DLNRARIEKEYREKLAREAEEAARRAGEIARQQEMERQRHEQEKREQEQRAAEAARLQAE
RVRAEEERKRQADLEKEEALKRQKDAEEAKVKAERDSKERAVREAAAALHAASRSGPRVY
GRKSTTYERVAMQRVIASLHQLRHTVLQEEAFSKEKKLTTIRRGLRPKFGQLNGERNQTI
EVRDFLKNTFVDLRSDQEGPMISANDFFLNQDPSCDVPVPVAFVWTVNELAKLLVKQVVN
ECAMKPVTADPIGVAVISTFADERLLVNGHSFIDIVIARLLKKTPILTGELGPETTEGDR
KRLGWIQGGDGTWETEENHVNRMVGLTAGYTAIAGRNFGNSKLINPYPIFNLWHAVATVL
NAPADKLTNTHYFVMKTFLEVGAKKLVDVYGHQAKKLVELAVGDWALRGESQGFSGAVSV
KAFGKFLRGEEWWKNS
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atgccgctacccgattccgactccgaaggtgaatgggaagaagggaactctgacgctgac
ctcttcgcgaattccggcggcggcatctactcctccccgatcaggactgcgtcaccgcgc
ggcgcacagtccacttgtgctgtgcgcgctcataacttggccgagaagatcaacgctttg
gatttgaaggcgaaggagtactctctcgccagcaaacttgttgcgacggacgataaggcg
aaccaggagtttatgctggtttatctccaagatactaggtttgatgcccgcgaggctgcc
attctcgaagaacgttttcaggcaaaggtgaggagggtctacgaggcgaagcgccaggac
gacctcaacagggcaagaattgagaaggagtaccgggagaagttggcaagggaggcagaa
gaggctgctcgaagagccggggaaattgctaggcagcaggagatggagaggcaaaggcac
gaacaggaaaagagggagcaggaacagagagcagcggaggctgctaggcttcaggcagag
agggtgagggccgaagaggagaggaaacgtcaggcggatctggagaaggaagaagctctt
aagagacagaaggatgcggaggaagcgaaggtgaaggcggagcgagattctaaggaacga
gccgtcagggaagctgcagccgccctacatgctgcttcccgttctggtccgcgggtctac
ggtagaaaatctacgacttacgagagagtcgcaatgcagagagttatcgcgtctctacat
caattgcgtcataccgtgctccaagaggaggcgttctccaaagaaaagaagttgactact
atccgccgcggattgcgtcccaagtttggtcagttaaatggtgagagaaatcagactatc
gaagttcgtgacttccttaaaaatacttttgtcgatcttcgcagtgaccaagaggggcca
atgatttcggccaatgatttcttcctcaaccaggatccttcttgtgatgttcccgtcccg
gtggcttttgtctggactgtcaatgagcttgcgaaattgcttgtcaagcaagtcgtcaat
gaatgcgctatgaagcctgtcactgcggatccgatcggggttgcagtcatctccacgttt
gcagacgaacgtttgctcgtcaatggccattcctttatcgacattgtcattgctagactg
ctgaagaagacccccatcttgactggcgaacttggcccggaaactaccgagggcgatcgc
aagagattaggttggatccaagggggggatgggacctgggaaactgaggaaaaccatgtc
aaccgtatggtgggattgacggccgggtatactgctatcgctggaagaaactttggaaat
tcaaagttgataaacccatatccaatattcaacctctggcatgccgtagccaccgtcctc
aacgcccctgccgataagctcacaaacacacactacttcgtcatgaagacttttctcgaa
gtcggcgccaaaaagctcgtcgacgtttatggccaccaagctaagaaattggtcgaactc
gctgtcggcgattgggccctcaggggagaatcacagggcttctcgggcgccgtctcggtc
aaggcgtttggcaaattcttgaggggtgaggagtggtggaagaactcttga
DBGET
integrated database retrieval system