Tuber melanosporum: GSTUM_00009424001
Help
Entry
GSTUM_00009424001 CDS
T01282
Name
(RefSeq) hypothetical protein
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
tml
Tuber melanosporum
Pathway
tml03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
tml00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
GSTUM_00009424001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tml03019
]
GSTUM_00009424001
03009 Ribosome biogenesis [BR:
tml03009
]
GSTUM_00009424001
03036 Chromosome and associated proteins [BR:
tml03036
]
GSTUM_00009424001
Enzymes [BR:
tml01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
GSTUM_00009424001
Messenger RNA biogenesis [BR:
tml03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
GSTUM_00009424001
Ribosome biogenesis [BR:
tml03009
]
Eukaryotic type
90S particles
RNase
GSTUM_00009424001
Prokaryotic type
rRNA processing factors
GSTUM_00009424001
Chromosome and associated proteins [BR:
tml03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
GSTUM_00009424001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonuclease_3
Ribonucleas_3_3
dsrm
RM44_endonuclase
Motif
Other DBs
NCBI-GeneID:
9184858
NCBI-ProteinID:
XP_002840738
INRA:
GSTUM_00009424001
UniProt:
D5GK86
LinkDB
All DBs
AA seq
524 aa
AA seq
DB search
MIPFVIKNFSYDVWSLDWINIQWVGLGPFFLVLIGLSYDLLPPYQQPPHSKLLEASPQNA
SIKMVRSRKRRHDDTDAITVSSPSRKESKRSKGCPDYLTWGIPKTKGLPQDEKRRQEQRH
EADESGRAQSSIFSSDVCSARKPPALDISQKFDAFGSAFAELILAAPNVNMEKCLGDEKA
NFFTAVRMMFETGDLPWLDEYMKKAKEARGNSEKSKKTPPANGNNPTGPLKNAVPKASDS
SPSTYTPPSTTDPALLSPSFSSWPPPLPEIHSDELRQQAFTHKSFIKGEDAGLPGIEQQH
YERLEFLGDSYLQSITSRILYNRFSKLREGPLSDMRQQLVANRPLSTYATIYRFHDKVRE
SKGQNTAAPVALVHNSRGTYKDMGVNKTLADCFEAYIAAIVLDSPNGVDIAQRWLTELFE
PKLKEMETQHASVGPVDKMAKQTLNTIVGGNRATVEYVWTDGEGGNKGGYWITVYLTGWG
FNKREIGSGWGNNKGYYISLPSFFLPIIHTRVESIHLANVLRKQ
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atgataccattcgtcattaaaaatttctcgtatgatgtttggagtttggattggattaac
atacaatgggtggggttgggccctttttttcttgttttaattgggctttcctacgatttg
ctcccgccttaccaacaaccgcctcactccaagctccttgaagcatccccacaaaacgcc
tccatcaaaatggttcgcagcagaaaacgaaggcatgacgatacagacgctatcaccgtc
agcagcccgtcgagaaaggagtccaagagatcaaagggttgccccgattacctcacgtgg
ggcatcccgaaaacgaagggtttgcctcaagatgagaaaagaagacaggaacagcgtcac
gaagctgatgagtctggccgtgctcaatcctccatcttcagcagtgatgtttgctcggct
cgcaagccaccagctctagatatctcccagaagttcgatgcctttggttccgcttttgcg
gagctcatcctagcggctcctaacgttaacatggagaaatgtcttggtgacgagaaggct
aacttctttacggctgtgcggatgatgttcgagactggagatctgccgtggttagatgaa
tacatgaagaaggcaaaggaggcgcgggggaattcagagaagtcgaagaaaaccccacct
gcaaatggaaacaacccaacaggacctctcaaaaacgcagttcccaaagcctctgacagc
tccccttcaacatataccccgccatcaaccacagacccagccttgctctccccctcgttc
tcctcctggccccctcctctcccggagatccacagcgacgaactccgtcagcaagccttt
acacataagtccttcatcaaaggggaagacgccggcctaccgggtatcgaacagcaacac
tatgagcgtctagaatttcttggcgactcctacctccaatctatcacctcccgaatcctc
tataaccgcttttctaaactccgcgaaggtcccctctctgatatgcggcaacaactagtt
gctaacaggcccctctccacatacgcgacgatctaccgctttcatgacaaagttcgtgag
tccaagggccagaacacagcagcacctgtagctctagtccacaactcccgcggaacctac
aaggacatgggcgtcaacaagaccctcgcggactgtttcgaagcatacatagctgctatt
gtgctcgactccccgaacggcgtggacattgcacagcgttggcttacggagttgttcgag
ccgaagttgaaggagatggagacccagcatgcgtctgttggtccggttgacaaaatggcg
aagcagacgttgaatactatcgttggggggaatagagctacagtggaatacgtatggacc
gacggggaaggcgggaataaaggcggttactggatcacagtgtatttgactggttggggc
tttaataagagggagattggatccgggtgggggaataacaaagggtactatatctcactc
ccttctttctttctccccataatacatactcgagtagaatccattcatctagctaacgtt
ttgagaaaacagtga
DBGET
integrated database retrieval system
