Tuber melanosporum: GSTUM_00009451001
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Entry
GSTUM_00009451001 CDS
T01282
Name
(RefSeq) hypothetical protein
KO
K14308
nuclear pore complex protein Nup54
Organism
tml
Tuber melanosporum
Pathway
tml03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tml00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
GSTUM_00009451001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tml03019
]
GSTUM_00009451001
Messenger RNA biogenesis [BR:
tml03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
GSTUM_00009451001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup54
Nucleoporin_FG
DUF2732
Nup88
PUMA_CC
Motif
Other DBs
NCBI-GeneID:
9181970
NCBI-ProteinID:
XP_002840759
INRA:
GSTUM_00009451001
UniProt:
D5GKA7
LinkDB
All DBs
AA seq
482 aa
AA seq
DB search
MSLFGSTFGQPQQQQQQSQGGGLPEQPAAQQPQQSGGLFGGAPQQQQQSTGGGLFGSQQP
QQQQQQGGLFGKPSGLFGQQSTPTTQQGGGLFGGGQSTQQSTGGGLFGGGGGGGGQQSAG
GGMFGSQQQQGGLFGGGQSSQPTGGGLFGGQSTHQPQQQFGQQGGSLFGQSRTGGGLFGQ
TPSQPQQQQQGELFSNSTANQGQQQGSYMNSTMGGYGQQSMFPMMSQSMRVQQQSANVIV
DKLGRIKNAWDTGHPDYAFKFYLYNHVGEDRANMYQKPPADDLAEWEKAWVERPNKGSVP
VLAKGFKDLDYRVKSQEQQVNLFRHRLHEIQDKLAALQSRHDLMTSIRLEDCRRRHTALS
RRALSLAAKVQVMKNRGYALQPEEEQLKKRLEALSRAVWDPAVRGRVNEIWARMMVVSEQ
ARMMEATVGKVEIVWDEKQLQTAGKLLQTNAAGLEHLNKEVRDIEKAFDQWEEEQKSRPR
GF
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgtccctctttggctcgacctttggtcagcctcagcagcagcagcagcaatcccaaggt
ggcggccttcccgaacagccagctgcgcaacaaccacaacagagcggaggactctttggt
ggcgctcctcagcagcagcagcagagcacaggcggtggtttatttggcagccaacagccg
cagcagcagcagcagcaaggcgggcttttcgggaaaccttcggggcttttcggccaacag
agcaccccaacaacccaacaaggaggtggcttattcggaggtggtcagtctactcaacag
agcactggtggcggcctctttggtggcggcggtggcggcggtgggcaacagagtgcgggc
ggaggaatgtttggcagtcagcagcaacaaggtgggctattcggtggcggtcagtcgagt
caacctactggaggtgggctcttcggaggacagtcaactcaccaaccccagcaacagttc
ggccagcagggtggatcactgtttggccagtcgcgaactgggggcggccttttcggtcag
acgccatctcaacctcagcagcaacaacagggtgagctatttagcaattcaactgcaaat
caaggacagcagcaaggatcctatatgaattctactatgggcggatatggacagcaatct
atgtttcctatgatgtcgcagtctatgcgggttcaacaacagtctgcaaatgtgatcgtc
gataaacttggcagaataaaaaatgcttgggatacaggacatccagactatgccttcaaa
ttttatctctataatcacgttggtgaagatagggcaaatatgtaccagaaacctccggct
gatgatttggcggaatgggagaaggcctgggtcgagagacccaataaaggatctgttcct
gtccttgccaaaggtttcaaggaccttgactatcgtgtcaagtcccaagagcaacaagtt
aacctgttccgacatcgccttcacgagattcaggataaactagctgcccttcaaagccgc
catgatttgatgacaagtatcagactcgaagattgccgtcgtcgacatactgccctttcc
cggagggccctatctctggcagccaaggttcaggtaatgaagaacaggggctatgctctt
cagcccgaagaagagcaattgaaaaagcgtctagaagccctctcaagggctgtgtgggat
ccagcagtgaggggcagagtgaacgagatttgggctagaatgatggttgttagtgagcag
gcgcgcatgatggaggctactgttggcaaggtcgaaattgtttgggatgaaaaacaatta
caaactgccggaaagcttttgcaaaccaatgcggcgggcttggaacacctcaataaggaa
gtcagagacattgagaaggcatttgaccaatgggaagaagaacaaaaatctcgacctcgg
ggattctag
DBGET
integrated database retrieval system