Tuber melanosporum: GSTUM_00009562001
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Entry
GSTUM_00009562001 CDS
T01282
Name
(RefSeq) hypothetical protein
KO
K08740
DNA mismatch repair protein MSH4
Organism
tml
Tuber melanosporum
Brite
KEGG Orthology (KO) [BR:
tml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tml03036
]
GSTUM_00009562001
Chromosome and associated proteins [BR:
tml03036
]
Eukaryotic type
Meiosis-specific proteins
Others
GSTUM_00009562001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
AAA_27
Motif
Other DBs
NCBI-GeneID:
9182038
NCBI-ProteinID:
XP_002840828
INRA:
GSTUM_00009562001
UniProt:
D5GKH6
LinkDB
All DBs
AA seq
828 aa
AA seq
DB search
MPRPSTSSSGTSCPPTSTSRPRTSRPRTATSAAGGGAQQVVCAVTESRGVSATIGLCFVN
TATGECVLSEICDTQTYVRTMQKLTVFDPTEILVSPAAVAPPKSTLLSIIEDYVPGATIT
EVPRRYFNERSGHDYIQQLAFPDEVTGIKVAISGKFYAISAAAAALKHIEVSYIRFALHS
LRIKYQGSEGSMLIDFSTVHSLELIQNIQDPKSTECLFGLLDNTLTAMGARLLRASILQP
LTDLSTLNARLDAVEEFTQHEEMFSQARQALKPFLDMDRLLTALITMPVKPSLKHSEQAI
NNIIILKQSLSSIAPVYDSLGSARSWLLVSIRNLCDSDQIEPVQNLISSIINEDVVFSKS
PLDLRNQRCYAVKSGVNGLLDVARQVYKEVTEDMHQLVEDISKEYDLPLELKFETGRGYY
LRLPASEIEDKPLPPVFVNVVKRKKIVEFSALEMLKCNAKISDSLAEVVLMSDNSVQKLV
EDIRKEVPALYRVAEGIAVLDMILSFAQLCTIQDYAGRHPIHEKIHKDQFFPNDVYASQQ
SRYALVSFARQVLAALTAQSTYLRSIALTAVIAQIGSFVPAQYASFPITRRLFARVSMDD
GIEANASTFASEMRETAFILGNVERGSLVIMDELGRGTSTRDGLALAVAVCEALIESRAL
VWFATHFKDLARILARRAGVVNLHLRVQMEDENTMTMLYKVTDGAVEDKNYGLTLARLVG
LPQSVLDRAAAVSEVLVGRHEKNMQTLIRARDGNMEEDALQPWLNRLQDEFVNRMAAWDA
EDMHAPMATAENGEGSEKADPGGKQMRDIIEIDSDEGEIDIDQTDDCY
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
atgcctagaccctcaacgagttcttcgggaacctcttgccctcctacgtcaaccagtcgt
cctagaacttcgcgaccaaggactgctacctctgcagctggagggggagctcagcaggtt
gtttgtgctgttacggagtctcgtggagtatcggctaccatcgggttgtgctttgtgaat
actgctactggtgaatgcgtattgagtgagatctgtgatacacaaacatatgtcaggaca
atgcagaaattgactgtgtttgacccgactgagattcttgtttctcccgctgctgttgcg
cctccaaaatcgactcttttgtctattattgaggattatgttcctggtgcgacgatcacg
gaagttcccaggagatacttcaatgaacggagtggtcatgattatatccagcaattggct
ttcccagatgaggtcaccggcatcaaggttgccatttctgggaagttctatgctatatct
gctgcggcggcggcattgaaacatatcgaggtttcttacataagattcgccttgcattcc
ctgagaatcaaataccaaggaagtgaaggctcgatgctgattgatttcagtacggtccac
agtcttgagctcatacagaatatccaggacccaaagtctactgagtgccttttcgggcta
ttggataataccctcacagccatgggagcgcggctgcttcgggccagcattctgcagcct
ctgaccgacctctccacactaaatgcaaggcttgatgccgtagaggagtttacccaacac
gaggagatgttttcccaagcaagacaggcattgaaaccatttcttgacatggacagactt
ctcactgcgcttatcaccatgccggtcaaacctagtttgaaacactctgagcaggcgatc
aacaatatcatcatactgaagcaatcgctatcgtccattgcgccggtctacgatagcctt
ggctctgccagaagctggctgctagtttccattcgtaatctttgtgattcagaccagatc
gaaccggtccagaacctgatcagcagtattataaacgaagatgtggtcttttccaagagt
ccattggaccttcgtaaccagagatgctatgcggtaaagagtggtgtgaacggattactt
gatgttgctaggcaggtttacaaggaagtcaccgaggacatgcaccaattggtcgaagac
atatctaaagagtatgatctgcctctagagctgaaattcgagactgggagaggctactat
ttgcgcctccccgcgtccgaaattgaggataaaccacttcccccagtctttgtgaacgtg
gtaaagagaaaaaaaattgtggagtttagtgcgctggagatgctaaagtgcaacgcgaag
atcagtgattctttggcggaagtagtgcttatgagcgacaactccgttcagaaattggtc
gaggacattagaaaggaggtaccggcactttacagggtggcggagggaattgctgttctc
gacatgattctgtcctttgcccaactctgcactattcaagactacgctggacgtcacccc
attcatgaaaagatacacaaggatcaatttttccccaatgacgtgtatgcaagtcaacaa
tctaggtatgctctagtttcatttgcacggcaggttttggcggcgctgaccgctcagtcg
acctatcttcggtcaattgctctcaccgcggttattgcgcaaatagggtcatttgtcccg
gcacagtatgcctcattccctataactcggcgtctcttcgctcgtgtctcgatggacgac
ggaattgaggctaatgcttctacttttgcgtcggagatgcgggagaccgctttcatcctt
ggcaatgttgagaggggaagcctggtaatcatggatgagcttgggcgcgggaccagcaca
cgagacggtttggcacttgcagttgctgtttgcgaagcattaatcgaaagcagggccttg
gtgtggttcgccacacattttaaggatctagcgaggatacttgcgagaagagcgggtgta
gttaatttgcatttgagagttcagatggaagacgagaataccatgacgatgctctacaag
gttactgacggggcggttgaggataaaaattatggtttaaccttggcgagactagttggg
ttaccgcagagcgtgctggatcgggccgcggccgtatcggaagtactcgttggaaggcac
gagaagaatatgcaaacattaatccgtgcccgggacggaaacatggaagaagatgctctc
caaccgtggttgaacaggcttcaggatgaattcgtcaacaggatggcggcttgggatgct
gaggatatgcatgcacctatggctactgccgaaaacggcgaaggttcggagaaggctgat
ccggggggcaaacaaatgagggacattatagaaattgatagtgacgaaggtgaaatcgat
attgaccagacggatgattgttactag
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