Tuber melanosporum: GSTUM_00009762001 Help Entry GSTUM_00009762001 CDS       T01282                                  Name (RefSeq) hypothetical protein   KO K03006   DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6] Organism tml  Tuber melanosporum Pathway tml03020   RNA polymerase tml03420   Nucleotide excision repair Brite KEGG Orthology (KO) [BR:tml00001]  09120 Genetic Information Processing   09121 Transcription    03020 RNA polymerase     GSTUM_00009762001   09124 Replication and repair    03420 Nucleotide excision repair     GSTUM_00009762001  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:tml03021]     GSTUM_00009762001    03400 DNA repair and recombination proteins [BR:tml03400]     GSTUM_00009762001 Enzymes [BR:tml01000]  2. Transferases   2.7  Transferring phosphorus-containing groups    2.7.7  Nucleotidyltransferases     2.7.7.6  DNA-directed RNA polymerase      GSTUM_00009762001 Transcription machinery [BR:tml03021]  Eukaryotic type   RNA polymerase II system    RNA polymerase II     Core subunits      GSTUM_00009762001 DNA repair and recombination proteins [BR:tml03400]  Eukaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     TCR (transcription coupled repair) factors      DNA-directed RNA polymerase II complex       GSTUM_00009762001 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  RNA_pol_Rpb1_5 RNA_pol_Rpb1_3 RNA_pol_Rpb1_4 RNA_pol_Rpb1_R RNA_pol_Rpb1_7 RNA_pol_Rpb1_6 RNA_pol_Rpb1_2 EcoEI_R_C Motif Other DBs NCBI-GeneID:  9183365 NCBI-ProteinID:  XP_002840938 INRA:  GSTUM_00009762001 UniProt:  D5GKT6 LinkDB All DBs AA seq 1025 aa AA seqDB search MNLHVPQSEETRAEVSQLCMVPLNVVSPQKNGPLMGIVQDTLCGIYKMCRRDVFLNREQV MNILMWVPNWDGTIPTPAILKPRPRWTGKQMISLVIPPGINKVDLAGGKWSPLNDEGLLV HGGELMFGLLNKKAVGQSHLSLIHIIYNEKGAYRCLEFFNGCQTIVNYWLLHNGFSIGIG DTIPDKLTIEKIAATVKEKKDEVNAVTDKAQRNELEPLPGMNIRDTFENLVQKSLNSARD KAGSDTEKSLKDSNNAIQMARSGSKGSNINISQMTAVVGQQSVEGKRIPFGFKYRTLPHF TKDDYSPESRGFVENSYLRGLTPQEFFFHAMAGREGLIDTAVKTAETGYIQRRLVKALED VMAKYDGTVRNSLGDIIQFIYGEDGLDGIVDEKLQLPINILRILENARTIFRIKHRARSN LHPLEVTEKVKELVKKLVSRFARAAVQPGEMVGVLAAQSIGEPATQMTLNTFHFAGVSSK NVTLGVPRLKEILNVAKNIKTPSMMVYQVPENTHEKETAKALRSAVEHTTLRSVTETTEI WYDPDPRDTVIEEDKETVFDDNAEIPNIRCRMKNADQAKSLDEESDLEEDTMLKRLENHI LDELTLNGVLEVEGVDTTRTYSNTFEEILQVFGIEATRGALLRELRQVLAFDGSYVNERH LALLCDVMTSRGHLMAITRHGINRADTGALMRCSFEETVEILLEAAASGELDDCRGISEN VMLGQLAPLGTGEFDVFLDEKMLAEVIVDNSRVTGGEIPGMGKGVLADGAATPYDSSSPM YGDPYVGSPDAGAAFSPMQHTGSETPGGLTDYQAPGFGSSYGGAGARSPLTYSPTSPFGT SPTSPGYSPASPAYSPTSPNMAITSPGFSAASPRFSPASPAYSPTSPGYSPTSPAYGGGL GVGGSPTSPNYSPTSPSFSPTSPTYSPTSPNYSPTSPAYSPTSPDYSPTSPAFSGGVGNS HSPTSPTSPNYSPTSPVYSPGSPAASYSPTSPTFQSPTQGSPRWSPTSPGPSYSPTSPRD PPRNS NT seq 3078 nt NT seq  +upstreamnt  +downstreamnt atgaatcttcatgttccccaatccgaagaaacacgtgctgaagttagccaactctgtatg gtgcctttgaatgtcgtgtcgcctcagaagaatggacctctcatgggcattgtccaagac actctctgcggtatctacaaaatgtgccgaagagatgtatttctcaatcgtgaacaagtt atgaatattctcatgtgggtacccaattgggatggaacaatacctacgcctgcaatcttg aaacctcgacctcgttggactgggaagcaaatgattagtttagttattcctcctgggata aataaggttgatctcgcaggggggaagtggtctccgttaaacgacgagggcttactagtt catggcggtgagctgatgtttgggcttcttaacaaaaaggcggtcggacagtctcatttg agtttgattcatatcatatacaacgagaagggtgcctaccgatgcttagaattcttcaat ggttgtcagacaattgtcaattactggctgctccataacggctttagtattggtattggg gataccattccggataagttaactatcgagaagattgcagcgactgtcaaagagaaaaaa gacgaggtcaatgcagttactgataaagctcagcgcaacgagctcgaacccctaccggga atgaatatccgtgatactttcgagaacttggtccagaaatcgcttaactctgcccgcgat aaggcaggttctgacactgagaagagtttgaaggacagcaacaatgcaattcagatggct cgatctggttcaaagggttctaacatcaacatctctcagatgacagcggtcgtaggccaa caatcggttgaggggaagcgtattcccttcgggttcaaataccgcaccttgccccatttc acaaaagatgattatagtcctgaatcccgcggattcgtggagaattcctatcttcgtggc cttacccctcaagagttctttttccatgccatggctggtagagaaggtttgattgataca gctgtcaagactgccgagactggttacattcagagacggttggttaaagcgttggaagac gtcatggccaaatatgacggtaccgtgagaaattcccttggggatatcatccagttcatt tatggtgaagatggccttgacggaatcgtcgacgagaagctacaattacccatcaatatc cttcgcatcttggagaacgcccgcactattttccgtatcaagcatcgcgctcggagtaat cttcatcctcttgaagtcactgaaaaagtcaaagaacttgtgaagaagctcgtttctcgg ttcgctcgagccgcagtgcaacctggcgaaatggttggggtcctcgctgcgcagtccatt ggtgagccggctactcagatgacgttgaatactttccatttcgctggtgtgtcgtctaag aatgtcactcttggtgttcctcggttaaaggaaattctcaacgttgccaagaacatcaag actccctctatgatggtttaccaggttccagaaaatacccacgagaaggaaactgcgaaa gcacttcgttcagcggtcgaacatacaaccttacggtcagtcactgagaccactgagatt tggtacgaccctgatccgagggatactgtcatagaagaggataaggagactgtttttgat gataacgcagaaattccaaatattagatgtcgaatgaagaatgcggaccaagccaaatct ttggatgaggagagtgatcttgaagaagacaccatgctcaaacgtctagagaatcacatc cttgacgaattaaccctcaatggcgtactcgaagttgaaggggttgatactaccagaacc tactccaacacattcgaggaaatcttacaagttttcggaatcgaggctactagaggtgca cttcttcgagagttaaggcaggtgttggctttcgatggttcttatgttaacgaacgacat cttgcgcttctttgcgatgtcatgacttcgcgtggacacctgatggccatcactcgccat ggcattaatcgtgcagacaccggtgcgctcatgaggtgttcttttgaggagactgtggaa atcttgttggaagcagcagcctcgggagaattggatgattgcaggggaatctctgaaaat gttatgttgggacaattggctcctttggggacaggggaattcgacgtcttcttggacgaa aagatgttggccgaggtgattgttgacaattcacgcgttaccggtggagaaataccaggc atgggcaagggtgttctcgcggacggcgccgcaactccttacgacagttcctcaccaatg tatggtgacccttacgtgggatcacccgatgccggtgccgcgttctcgcctatgcaacat actggctcggagacgccaggtggattgaccgactaccaagcccctgggttcggatcaagc tacggtggtgcgggtgccaggagtcctctaacatattcaccaacgagcccttttggcaca agtccaacctctccgggctactcccccgcttcgcctgcatattcgcctacatcgcctaac atggctattacgagcccgggattcagtgcagcgtcccccagattttcgcccgccagtcct gcctacagcccaacgtcccctggatactcaccgacatccccagcttacggaggtggcctt ggtgttggtggatccccaacctctcctaactattcgccaacaagtcctagcttcagccca acaagcccaacatacagtccaaccagtcctaactactcccccacaagccctgcatactcc ccgaccagccctgactactcccctactagccctgccttcagtggtggggttggtaacagt cattctccaacttcgccgaccagtcccaactatagtcctacaagccctgtctattctcct ggcagtcccgctgctagctatagcccgacaagtccaaccttccagagtcccactcagggg agtccgaggtggtcgccgacaagccccgggccaagctattcaccaacatcccctagagac cccccgaggaattcttaa

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