Tuber melanosporum: GSTUM_00009777001
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Entry
GSTUM_00009777001 CDS
T01282
Name
(RefSeq) hypothetical protein
KO
K11661
helicase SRCAP/SWR1 [EC:5.6.2.-]
Organism
tml
Tuber melanosporum
Pathway
tml03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
tml00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
GSTUM_00009777001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tml03036
]
GSTUM_00009777001
Chromosome and associated proteins [BR:
tml03036
]
Eukaryotic type
Chromatin remodeling factors
SRCAP complex
GSTUM_00009777001
SWR1 complex
GSTUM_00009777001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
DEAD_2
CENPU
DEAD
Motif
Other DBs
NCBI-GeneID:
9183377
NCBI-ProteinID:
XP_002840950
INRA:
GSTUM_00009777001
UniProt:
D5GKU8
LinkDB
All DBs
AA seq
1046 aa
AA seq
DB search
MAEIKRRRPLTKEEIEQEEFFENRRIYREQISQLRRKWEEVLKEVENRRRMRAEEEHRLA
GKQHLNQMLEHSTQLLEARRGDRHNSMTASEGGLDMAEGEYDGEEGGEEEEEDDSKSMSE
LEVELDEANMSTTDSDEEEVEDDDESLTVEQLKAKYAGLGPSQASLGGKRLIQEDDLSDI
EDGMLLDGRTPVPSDVPSDDENPEDVAARMDVDENQTEAVELEEVDEILMDDSDESVDMD
SEDETDDSESGKDGDSEDDSEGENGFGSGLLGLYGDLNGLRASSRDLEPESEDENEFTEP
VQKDRSLERSSDSMQIESLSKSSKINGSKLNAADELLEEDRIDEVSLVVYKSPPGKTVGD
SYVSAPRVIGGQALEIPMLNGHSDTMDVETSTSLSHSQIDLKESGHPSSLTTSPETSPQP
NIDIKTPIPFLLRGTLREYQHYGLDWLAGLYNNHTNGILADEMGLGKTIQTIALLAHLAC
EKEVWGPHLIVVPTSVMLNWEMEKGWFDNNLWHVCITSYQLVLQDQVTFKRRNWHYLILD
EAHNIKNFRSQRWQTLLNFKAEARLLITGTPLQNNLIELWSLLYFLMPSGASSAMPAGFA
NLKEFQEWFAHPLHRVLRPYLLRRLKADVEKQMPAKFEHIVYCRLSKRQRYLYEEFMSMA
KTRETLASGNYLSIINCLMQLRKVCNHPDLFETRQIVTSFAMQKSVVADYEVKELLYDCG
KLQRLDLLLRQLQAGGHRALIFTQMTKVLDILEQFLNIHGHRYLRLDGATKVEQRQILTD
RFNNDTRILVFILSTRSGGLGINLTGADTVIFYDLDWNPAMDKQCQDRCHRIGQTRDVHI
YRFVSEYTIESNILRKSNQKRMLDDVVIQEGDFTTDYFNKLTIRDMLGDEVIKDLDGVDD
SQTVVAPGVNMEKALEAAEDVEDVAAAKVAQREVVDADGADFAERSTPAQTPREPGTATA
GTTPREPSAPVSNAAMTPQGNTVELEVVTHRGLGYDIYGDGWNRVDREPVHIDEYMIRYM
EWELVDVPLVLPSKSKKKKSKKGKKF
NT seq
3141 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaatcaagagaagaagacctttgacaaaagaggagatcgagcaagaggagttt
tttgagaaccggaggatatatagagaacaaatttctcagctacgtcggaagtgggaggaa
gtattgaaggaggttgaaaaccgcagaagaatgagggcagaagaggaacatcgactggca
ggcaaacagcacctgaatcaaatgcttgagcactcgactcagctactcgaagctcggcgg
ggagaccgtcataactctatgacagcatccgagggtggtctagacatggcagaaggggag
tatgatggggaggaaggtggagaggaggaggaagaagacgacagcaagagtatgtccgaa
ttggaagtggaactggatgaggcaaatatgtcgactacagattctgatgaggaagaggtg
gaagatgacgatgagagccttacagtggagcaactgaaagcaaagtacgcaggtcttggc
cccagtcaagcttcacttggaggcaaaaggcttatccaggaggacgatctatcggatatt
gaggatgggatgttgctcgatggtagaacacctgtaccatctgatgtaccctcggatgat
gagaatccggaagatgtcgctgctagaatggatgttgacgaaaaccagactgaggcagtt
gagcttgaagaagttgatgagatcctcatggatgatagcgacgaatcagttgacatggat
tctgaggatgagacggatgatagcgagagtggtaaagatggtgattccgaggacgattcc
gagggtgaaaatgggtttgggtccgggcttctagggttatacggggacttgaacgggtta
agggctagctctcgcgatctggagcctgaaagtgaggatgagaacgagtttacggagcct
gtgcaaaaagaccggagcctcgagagatcttcggatagtatgcaaatagaatcactctca
aagagctctaaaatcaatggctctaaactcaacgccgccgatgaattactggaggaagat
aggatcgatgaagtgagccttgttgtttacaaatccccaccgggtaaaacagtcggagat
agctatgtctctgcgccgagggttattggaggccaggctctagaaataccgatgctcaac
ggtcattcagatacaatggatgtggaaacgtcaacatcgctctcccattcacagattgat
ttgaaagaaagcggccacccctcatcgcttacaacatcaccagaaacctctcctcaacca
aatatagatatcaaaactccgattccgtttcttctccgggggactttgagagagtaccag
cattatggtctcgattggctcgccgggctctacaataaccacaccaacggtatcctagcc
gacgagatgggacttggtaaaacgatccagaccatcgcactcttagcacaccttgcgtgc
gaaaaggaggtttggggaccgcatctcattgttgtcccaacgagtgtcatgcttaattgg
gagatggaaaaggggtggtttgacaacaacctatggcatgtgtgcatcacttcttaccag
cttgtccttcaagatcaggttacttttaaacgccgcaactggcattatttgattttggat
gaggcacataatatcaagaatttccggtcgcagagatggcaaactcttctcaacttcaaa
gccgaggcccgtttgttgattacaggaacccctctccagaacaacctaatcgagctatgg
tcgttgctctactttctcatgccttctggagcttcgagtgccatgcctgctggatttgca
aacctaaaggagtttcaagaatggtttgcgcatcccctccatcgtgtcctcaggccttat
cttcttcgcagattgaaggcagacgtagagaagcagatgccagcaaaattcgaacatatc
gtttattgtaggctatcgaagcgacaaagatatctttacgaggaatttatgtcgatggca
aaaacacgcgaaacactggcatcaggcaactatctctccatcattaattgtttgatgcaa
cttcgcaaggtctgtaaccacccagacctatttgaaactcgccagatcgtcacatctttc
gcgatgcaaaagtctgtggtcgccgattatgaggtcaaggagctactatatgactgcgga
aagctacaacgtctagaccttctcttgcgtcagttgcaagccgggggacatcgggctttg
atctttacccaaatgaccaaggttctagatattctcgagcaatttttgaatatccacggt
catcggtacctccgccttgatggagctacgaaggttgaacagagacaaatattaactgat
cgatttaataacgatacaaggattctcgtctttatcctatccacccgttccggtgggctt
ggtatcaacttaacaggtgcagatactgtgatattctatgatttagactggaatcccgcg
atggacaagcaatgccaagaccgatgtcatcgtattggtcaaactcgtgacgtccacatc
taccgcttcgtctctgaatacaccatcgagtcaaatattctccggaagtcaaaccaaaag
cgaatgttagatgatgtggtcattcaagagggcgatttcacaaccgactacttcaacaaa
ctcacaatccgcgatatgctcggagatgaagttatcaaggatctagatggcgtggacgat
tcgcaaacagtggttgcccccggggtcaacatggagaaagcgctcgaggcagccgaagat
gttgaggacgttgcagcagccaaggttgcgcaaagggaagtcgtcgatgccgacggtgcc
gactttgctgaaaggagcactccagcacaaacaccaagggagcccggtactgctactgca
ggaaccacacccagggagccatcggcgcccgttagtaacgccgccatgacaccgcaagga
aatactgtggaactagaggttgttacccacagaggtctcggttatgatatttacggcgac
ggctggaaccgggttgatcgagaaccagtgcacattgacgaatacatgattcgatatatg
gaatgggagctagtagacgtcccgctcgtcctcccaagcaagagcaagaagaagaaaagt
aagaagggaaagaagttttag
DBGET
integrated database retrieval system
