Tuber melanosporum: GSTUM_00010012001
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Entry
GSTUM_00010012001 CDS
T01282
Name
(RefSeq) hypothetical protein
KO
K12584
m7GpppX diphosphatase [EC:
3.6.1.59
]
Organism
tml
Tuber melanosporum
Pathway
tml03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tml00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GSTUM_00010012001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tml03019
]
GSTUM_00010012001
Enzymes [BR:
tml01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.59 5'-(N7-methyl 5'-triphosphoguanosine)-[mRNA] diphosphatase
GSTUM_00010012001
Messenger RNA biogenesis [BR:
tml03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
Other 5'-3' decay factors
GSTUM_00010012001
3'-5' decay
Other 3'-5' decay factors
GSTUM_00010012001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DcpS_C
DcpS
Motif
Other DBs
NCBI-GeneID:
9182042
NCBI-ProteinID:
XP_002841057
INRA:
GSTUM_00010012001
UniProt:
D5GL55
LinkDB
All DBs
AA seq
315 aa
AA seq
DB search
MSVSAEEEARLRRFNFTRILNQDTGTKTVNLLGEIESTPAILIAEKTAFNVTGAHLTKFS
HDLHLPKVTLIARNDIYHSFMASQNSEYGEVKLTLIFPATETHIQKYTHQQLRMVVETPE
IYRELVKPYVEEKRGSGRLDWVHNILEHKAEKESIIVEDTDDVEGFILLPDLKWDRKTMA
SMYTMAIVRRRDITSIRDLKKMHVPWLKNLRRRIPEVICEKYSGIEPDQIKLYVHYQPSY
YHFHLHAISISHDSGIGQATGKAILLGNIISRLESLGGDEEAGMESVELTYFLGEESELW
QRVFKGINGKGKAKE
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgtcggttagcgcggaagaagaagcgaggcttcggagatttaattttacaagaatctta
aatcaagacacgggaaccaaaacggtaaaccttctgggcgaaatcgagtccactcctgca
atcctgattgctgagaaaacggccttcaatgtcactggcgctcaccttactaaattctcc
catgacctccatctcccaaaagtcaccttaatagcacgaaatgacatataccactcgttc
atggcctcacagaattccgagtatggagaagtgaagctaacccttatatttcccgccacc
gaaactcatatccagaaatatacgcatcagcagttgaggatggtcgtcgagacccccgag
atttatagggaactagtcaagccctatgttgaggagaagcgcggtagtgggaggttagat
tgggtgcataacatcctcgagcataaagctgagaaagagagcattattgttgaggatacg
gacgatgtagaggggtttattctcttaccggatctgaagtgggatcggaagaccatggcg
agtatgtacactatggcgatagtgcgtcgtcgtgacatcacctcaatccgggacctgaag
aagatgcatgttccgtggctgaagaacctgagaaggagaattcctgaggtgatttgcgag
aagtatagtggcattgagccagatcagatcaagctttatgttcactaccaaccctcatac
tatcacttccacctgcatgctatctccatctctcatgatagcgggatcggtcaggcaact
ggcaaagctatcttgttgggcaacataatcagcaggttggagagcttgggcggtgacgaa
gaggccggtatggaaagcgttgagttgacgtattttcttggggaggagagcgagttgtgg
cagagggtttttaagggaatcaatgggaaagggaaggctaaggaatag
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