Tuber melanosporum: GSTUM_00010106001
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Entry
GSTUM_00010106001 CDS
T01282
Name
(RefSeq) hypothetical protein
KO
K12613
mRNA-decapping enzyme subunit 2 [EC:
3.6.1.62
]
Organism
tml
Tuber melanosporum
Pathway
tml03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tml00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GSTUM_00010106001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tml03019
]
GSTUM_00010106001
Enzymes [BR:
tml01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.62 5'-(N7-methylguanosine 5'-triphospho)-[mRNA] hydrolase
GSTUM_00010106001
Messenger RNA biogenesis [BR:
tml03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
GSTUM_00010106001
mRNA degradation factors
5'-3' decay
Decapping complex
GSTUM_00010106001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DCP2
NUDIX
DUF3884
NUDIX_4
Motif
Other DBs
NCBI-GeneID:
9182095
NCBI-ProteinID:
XP_002841110
INRA:
GSTUM_00010106001
UniProt:
D5GLA8
LinkDB
All DBs
AA seq
736 aa
AA seq
DB search
MDLTNSYIFSNSTLAEILDDLCVRFIINLPEEELSSIERICFQIEEAQWYFEDFIRETNP
MLPTLPLRTFLNKIFAICPLPILKEMPPERAENAFAEFMAYKTRVPVRGAVLLNSAMDKC
VLVKGWKSGASWSFPRGKINKDERDEDCAAREVLEETSYDIEGRVHSDHFVEVTMREQNM
RLYIIPGVPEETKFEPRTRKEISKIAWHHLSDLPTFSKKKNQQNIQQSDVRTGKYYMVAP
FLKELRKWISTSGKKWLEEQKQMPSSATLIGDETEIEDIIPPQAVDSSAELRNLLGIPHN
GAAKPNGNYNTTGTDEATARLKNFLNLSGPVTEPVDASSKLKSLLNVGGGSNTQITEQSL
KPNPQMLLSILQNKGGPSNPQPTATPPILPQPMGQHTPSIPTPTHHSPTGPPNNLMEGFH
SQIRPPHPPSPPPTFSFLGPHQMYDPLHSQPHPPNHLFTHRQFNQPIFPSNHHGESPTFP
NRPPGWRPSPTPLDALMPSPVPSKPPDPGQAVMLLSILKSAAPSTPATPHTPPPARAANP
SRTPSQPYHQQEQQTKQIGLQTPPALKTSGSQHKNNLLDTLRGSTTETTRPASATLIAQY
DFPPRHMAPLASENAPARPLHSATASPQISRFPSRTPNASHTPVPASTTPQPTSFDRRQS
VSSEQQRALLAIFTNGASTPHEDPAIISSSEGAKPTTPLRSRTTSFARRVTPMSPLSREK
DGLLAYLETVAKEGGQ
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atggatcttaccaattcttatatttttagtaactcgacgctggccgaaattctagatgac
ctttgtgtgagattcatcatcaatctaccagaggaggagctgagttcgattgagcgaata
tgttttcaaatcgaggaggcgcagtggtatttcgaggatttcatccgagaaacgaatccc
atgctgcctacacttccgctccgtacttttcttaataagatctttgctatctgtccgcta
cctatcttgaaggaaatgccgcctgaacgagcggaaaatgcgtttgcggaattcatggct
tacaaaacacgcgtgccagttcgtggtgcagtattgttgaacagtgcgatggataagtgt
gtacttgtgaagggatggaagagcggggctagttggagttttccccgagggaaaatcaac
aaggatgagcgagacgaggactgtgcggccagagaggtactggaggaaactagctatgat
attgagggaagggtccatagtgatcattttgttgaagtcacaatgagggagcagaatatg
aggttatatatcattcccggagtacctgaggaaacgaagtttgagccaaggacaaggaaa
gagatcagtaaaatcgcatggcatcatttgtctgacctaccaaccttttcaaaaaagaag
aaccaacaaaacatccaacaatctgacgttcgaacaggaaagtactatatggttgcccca
ttcctcaaagaactccgtaagtggatttcaacatctggaaagaaatggcttgaggagcag
aaacagatgccatcttcggcgactctcatcggcgatgagacagagatagaagatattatt
ccaccgcaagccgttgattcttcggcagaattaagaaatctcttaggtatcccgcacaac
ggggccgccaaacccaacggaaattataataccactggaaccgacgaggctactgcgagg
cttaagaattttctcaatctttctgggcctgtcacagaacctgtggatgcttccagcaaa
ctcaagtctttactcaatgtgggtgggggaagtaacacccagataacggagcaatcgctc
aaaccaaacccccaaatgctgctctccatcttacagaacaaaggtgggccttcaaaccca
cagccaaccgcgacccccccaatccttccacagcctatggggcagcatacaccttcgatc
ccgacacctacccatcactctccaactggcccgcctaataatcttatggaaggctttcac
tctcaaatacgccccccccacccgccatctcctccccccacattcagtttcctaggtcct
caccagatgtacgacccgctgcacagtcaaccccatcctccaaaccatctgttcacccat
cgccaattcaatcagcccatatttccttcaaaccatcatggcgaatcccccaccttcccg
aacaggcccccaggttggcggccatctccgaccccgctcgacgcacttatgccctcgcct
gttccttccaaacccccagatccggggcaagcagtaatgctcctatcgattctcaaaagt
gctgcaccgagcaccccggcaactccacatacacctccccctgcacgagctgcaaaccct
tcacgcactccctcccagccgtaccatcaacaagagcaacaaacaaaacagattggcttg
caaacgcctccggccttaaagacttccggatcgcagcacaaaaacaaccttctcgacacc
ctccgaggaagcacaactgaaaccacaagaccggcctctgctaccctcattgcccagtat
gattttccaccaaggcatatggcacctctagcttccgagaatgcaccagcaaggcctttg
cattccgcgactgcttcccctcagattagccgatttccctcaaggactccgaatgcatcg
cacacaccggttccagcaagcactaccccacaacccacgagctttgatagacgacaatct
gtcagcagcgaacagcaaagggcgctgcttgcaatattcaccaacggcgcgtctactccc
catgaggaccctgcaattatttcctcatctgagggagcgaaacctaccacacctttgaga
tcgaggactacaagtttcgctcgaagggttaccccaatgagtcctttgtcgagggagaag
gatggcctcttagcttatctcgaaaccgtggctaaggaaggtggccaatag
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integrated database retrieval system
