Tuber melanosporum: GSTUM_00010135001
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Entry
GSTUM_00010135001 CDS
T01282
Name
(RefSeq) hypothetical protein
KO
K13201
nucleolysin TIA-1/TIAR
Organism
tml
Tuber melanosporum
Brite
KEGG Orthology (KO) [BR:
tml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tml03019
]
GSTUM_00010135001
03041 Spliceosome [BR:
tml03041
]
GSTUM_00010135001
Messenger RNA biogenesis [BR:
tml03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
GSTUM_00010135001
Spliceosome [BR:
tml03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
GSTUM_00010135001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_5
RRM_7
RRM_PARP14_3
Cas_Cas2CT1978
RRM_8
Motif
Other DBs
NCBI-GeneID:
9184777
NCBI-ProteinID:
XP_002841131
INRA:
GSTUM_00010135001
UniProt:
D5GLC9
LinkDB
All DBs
AA seq
498 aa
AA seq
DB search
MSADNQNAPPAGSSSIPAPAPSASAPGQNQGQSSHMPPPPLPPVIIPQNTNPIPTAITSP
MSVSGVTSPTSAGGFVRRAAPEPNKRALYVGGLDPRVTEEILKQIFETTGHVQNVKIIPD
KNSKGYNYGFIEYDDPGAAERAMQTLNGRRIHQAEIRVNWAYQSNQSSKEDTTNHFHIFV
GDLSNEVNDEVLMQAFSTFGSVSEARVMWDMKTGRSRGYGFVAFRDRADAEKALSSMDGE
WLGSRAIRCNWANQKGQPSISQQAAMAAMGMTPTTPYGHHNFPTHGVQSYDMIVQQTPQW
QTTCYVGNLTPYTTQNDLVPLFQNFGYVVETRFQADRGFAFVKMDTHENAAMAICQLSGY
NVNGRPLKCSWGKDRPPTGQFDAYSPQQPNTPQYPPQTPSAYFPQYGGPMTPQGPPNSAG
GPNALQGHGPQSPAGPSPPGRWQDQSQGFGGPQNQTAYGGMPQSAGGYGRGNGTGTPGGW
GGNSAGAFGSNGFGAYQQ
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgtccgctgataatcagaacgccccgcccgctgggtcctcctcgatccccgccccggct
ccttcggcttctgcccctggccagaaccagggacagtcgagccacatgccgcctccgcca
cttcctcccgttatcattccccagaacactaaccccattccgacggctatcacttcgcct
atgtcggtttccggtgtgacctctcccacttccgcgggaggttttgttcgtcgtgcggcc
cctgagcctaacaagcgggctctttatgttggtggcttggaccctcgggttacggaagag
attctcaagcagatcttcgagaccactggtcacgtccagaacgtcaagatcatccctgat
aaaaatagcaaggggtataattatggtttcattgaatatgatgaccccggcgcagccgaa
cgtgccatgcaaaccctgaatggaagaagaattcatcaggctgaaattagggttaattgg
gcttatcagtctaatcagtctagcaaggaggacaccactaatcactttcatattttcgtt
ggtgacttgtccaatgaggtgaacgatgaggttttgatgcaagcattttctacttttggg
tcggtctcggaagcccgtgtcatgtgggatatgaagactggtcgttccaggggctatgga
tttgtcgcgtttcgtgatcgcgcagacgcagagaaagctcttagtagcatggatggggaa
tggcttgggtctcgtgcaatccgttgtaactgggcgaatcagaagggccaaccctcaatc
tcccagcaggctgccatggctgctatgggaatgactccaaccaccccctatggacatcac
aacttccccacccatggggtccaaagctatgacatgattgttcaacagaccccccaatgg
cagacaacatgctatgttggaaatctaaccccgtacaccacccaaaacgatttggtccct
ttgttccagaatttcggttacgttgttgaaacccgtttccaggctgatcggggatttgca
tttgtcaagatggacactcacgaaaatgcggctatggcgatttgtcaactttcgggctac
aacgtgaatgggagaccgttgaagtgcagctggggcaaggatcgtccgccaaccggtcaa
ttcgatgcctattctccccaacagcccaacactcctcaatatcctccccaaacaccatcc
gcctacttcccgcagtacggtggtccgatgacacctcaagggccacccaattctgctgga
gggcctaatgcactccagggccatggcccccaatctccggccgggccatcgccgcctgga
agatggcaggatcagtctcagggctttggaggaccgcagaaccagactgcttatggtggg
atgcctcagagcgccggtggatatggtcgcggcaatggtaccggaactccaggtggatgg
ggtggaaactctgccggtgcattcgggagcaatgggtttggagcataccaacagtaa
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integrated database retrieval system
