Tuber melanosporum: GSTUM_00010172001
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Entry
GSTUM_00010172001 CDS
T01282
Name
(RefSeq) hypothetical protein
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
tml
Tuber melanosporum
Brite
KEGG Orthology (KO) [BR:
tml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tml03009
]
GSTUM_00010172001
Enzymes [BR:
tml01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
GSTUM_00010172001
Ribosome biogenesis [BR:
tml03009
]
Eukaryotic type
90S particles
Helicases
GSTUM_00010172001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_25
T4SS-DNA_transf
Motif
Other DBs
NCBI-GeneID:
9186092
NCBI-ProteinID:
XP_002841157
INRA:
GSTUM_00010172001
UniProt:
D5GLF5
LinkDB
All DBs
AA seq
515 aa
AA seq
DB search
MEPTNANEEEGKKKKKKKEALMIQPLTSFTHLHKLSPRLHRNIRAQGYRVPTEVQMGAMP
VISRGENLICCAPTGSGKTVAFMVPVLDWILAQGKGDEGGGEGKRKKVRVVVVAPTKELA
SQIVNEGKKLALGTGVRVALLKKGGEGVKSEVVVSTPAVLLHSLEASTSCSPSPGEGDEM
EEKKTDWSSVSRLILDEADILLDPLFRAQTLGIWTQLQSPHLRTSLFSATISSSTETLCQ
QHIPPSSSPTIRLIVGLKDTTIQNITQKLTYTATEPGKLLALRQLFTTSFHPPALIFVQT
IPRARALVAEILYDLPTPGRIAVLHAELSDVARAEVMGRFLAGEIWVLVTTDLLARGMDF
RGVRCVINYDIPTSVAGYIHRVGRMGRSGGVQGGLAITYFTEGDVRFVKGIAGVIAKAQG
GGEGGKGEGKWLVNALPKVGKSDKERLKKRGVEARSKAADGKEGRISTKSGYERRRENRK
RGAVEGSKRRKVQAWGGGDSDGEEGEEFMGITDLD
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atggaacctacaaatgctaatgaagaagagggaaagaagaagaagaagaagaaggaagca
ttaatgatccaacccctaacttcattcacccacctgcataagttgtccccacgcctgcac
cgcaacatccgagcgcaggggtaccgtgtcccgacagaagtgcagatgggtgcgatgccc
gtgatctcgcgtggtgagaacctgatctgctgcgcgccgacaggaagcgggaagacggtg
gcgttcatggtaccggtcctggactggatactcgcgcaggggaaaggtgatgaggggggg
ggggaggggaagaggaagaaggtgcgggtagtggtggtggcgccgacgaaggaattggcg
agtcagattgtgaatgaggggaagaagctggctttgggtactggggtgcgtgtagcgttg
ttgaagaagggtggtgagggggttaagagtgaggttgtggtgtcaacgccggcggttttg
ttacattctcttgaggcttccacctcatgctccccctcccccggtgagggggacgagatg
gaagagaagaagaccgactggtcctcagtatctaggttaatcttggacgaagccgacatt
ctcctggaccccctcttccgcgcacaaacacttgggatctggacacaattacaatctccg
cacctccgcacctccctcttcagtgcgacaatctcttcttccaccgagaccctctgccag
caacacattcccccctcctcatcacccactatccgcctgattgtcggcctgaaagatacc
acaatccagaacatcacccaaaagctaacctacaccgcaaccgaacccggcaagctcctg
gccctccgccagctcttcacaacctccttccacccgcccgccttaatattcgtgcagacg
atcccacgggcgagagcgctcgtcgcagagatcctctacgacctacctaccccgggccgg
atcgcggtactgcacgcggagctctcggacgttgcgcgtgcggaggttatgggtcgcttt
ttagcaggggagatttgggtgcttgtcacaacggacttacttgcccgcgggatggacttt
cggggtgttaggtgtgtcattaattacgatatcccgacgtctgttgcgggttatattcat
cgtgttggacgcatgggaaggagtggtggggtgcagggggggctggcaattacgtatttt
acagagggggatgtgcgctttgtgaaggggattgcgggggttattgctaaggctcaaggg
ggaggtgaaggggggaagggggaggggaagtggttggtaaatgcgctgccgaaggttggg
aagagtgataaggaacggctgaagaaaaggggggttgaagcgaggagcaaggcggctgat
gggaaggaagggaggatcagtactaagagtggctatgagaggaggagggagaatagaaag
aggggggctgttgaggggagtaagaggcggaaagtgcaggcttggggcggtggggatagt
gatggggaggagggggaggagtttatggggattacggacttggattga
DBGET
integrated database retrieval system
