Tuber melanosporum: GSTUM_00010208001
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Entry
GSTUM_00010208001 CDS
T01282
Name
(RefSeq) hypothetical protein
KO
K12586
exosome complex component RRP43
Organism
tml
Tuber melanosporum
Pathway
tml03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tml00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GSTUM_00010208001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tml03019
]
GSTUM_00010208001
Messenger RNA biogenesis [BR:
tml03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
GSTUM_00010208001
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
Phage_T4_Y06R
Motif
Other DBs
NCBI-GeneID:
9186113
NCBI-ProteinID:
XP_002841178
INRA:
GSTUM_00010208001
UniProt:
D5GLH6
LinkDB
All DBs
AA seq
330 aa
AA seq
DB search
MTTAPPPSPPPPNPLSFPPATFQKLAPKIFLERHLQSTPATRPSGRNPDTFRTPSLHTNS
LSHAHGSAVVRTGDTAVVCGVRGEVLSLAAGTGGRIVVLRTGEDGRGKNGEGEGDEVRER
GLVVTNLEMGTGCSRDYHPGPPTDFAQAVTARLHRLLLSNKLISSQSLRILDPNTEEVKA
YWVLYIDAVVISLDGNVLDAAWASILAALRSTRLPQAYWDQDTEVVVCYPEVSRYKSLDV
KGLAFTASFAVIDLGAGKGGKVILSDPDEFEEGVCGERVMVCALEGEKVGWIEKGGGVGQ
VAEVVECVHRATERFKIWEQLFAEVLGSSG
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgacaacggcacctccaccctcaccaccacctccaaatcccctctccttcccaccagca
accttccaaaaactcgcgccaaagatcttcctagaaaggcacttacaatccactcccgca
acccgtccttcgggtcgcaatcctgacaccttccgcaccccctcgctgcacacgaactcg
ctttcgcacgctcacgggtccgcggttgtccggacgggggatacggcggtggtatgcggt
gttcgcggagaggtattatcgctggcggcggggacagggggtaggatcgttgtcctgcgg
actggggaggacgggaggggaaagaatggggagggagagggggatgaagttcgggagagg
ggcttggtggttactaatttggagatggggaccggttgctcgagggattatcacccgggc
cctcctacagactttgctcaggctgttaccgcgaggttgcatcgtttactgctctccaat
aagctcatctcatcgcagtcactacgcatcctggatccgaacaccgaggaggtaaaagcg
tactgggtgctctacatcgacgccgtcgtcatctcccttgatggtaacgtcctcgacgcc
gcctgggcttccattcttgccgctctccgttctacaaggctaccgcaagcgtattgggat
caggataccgaggttgtcgtctgctatcccgaggtctcgagatacaagtcgctcgacgtc
aagggattggcattcactgcgtcgttcgcagtcatcgacttaggcgcggggaagggcggg
aaggtgatattgagtgatccggatgaatttgaggaaggggtttgtggggagcgggttatg
gtctgtgcactcgagggagagaaagtcgggtggatcgaaaaggggggtggagttgggcag
gtcgcggaggtggttgagtgtgtgcatcgggcgaccgaaaggttcaaaatctgggagcaa
ttgttcgcagaggtactggggagtagtgggtga
DBGET
integrated database retrieval system
