Entry |
|
Name |
(RefSeq) hypothetical protein
|
KO |
K12586 | exosome complex component RRP43 |
|
Organism |
|
Pathway |
|
Brite |
KEGG Orthology (KO) [BR:tml00001]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GSTUM_00010208001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:tml03019]
GSTUM_00010208001
Messenger RNA biogenesis [BR:tml03019]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
GSTUM_00010208001
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
AA seq |
330 aa
MTTAPPPSPPPPNPLSFPPATFQKLAPKIFLERHLQSTPATRPSGRNPDTFRTPSLHTNS
LSHAHGSAVVRTGDTAVVCGVRGEVLSLAAGTGGRIVVLRTGEDGRGKNGEGEGDEVRER
GLVVTNLEMGTGCSRDYHPGPPTDFAQAVTARLHRLLLSNKLISSQSLRILDPNTEEVKA
YWVLYIDAVVISLDGNVLDAAWASILAALRSTRLPQAYWDQDTEVVVCYPEVSRYKSLDV
KGLAFTASFAVIDLGAGKGGKVILSDPDEFEEGVCGERVMVCALEGEKVGWIEKGGGVGQ
VAEVVECVHRATERFKIWEQLFAEVLGSSG |
NT seq |
993 nt +upstreamnt +downstreamnt
atgacaacggcacctccaccctcaccaccacctccaaatcccctctccttcccaccagca
accttccaaaaactcgcgccaaagatcttcctagaaaggcacttacaatccactcccgca
acccgtccttcgggtcgcaatcctgacaccttccgcaccccctcgctgcacacgaactcg
ctttcgcacgctcacgggtccgcggttgtccggacgggggatacggcggtggtatgcggt
gttcgcggagaggtattatcgctggcggcggggacagggggtaggatcgttgtcctgcgg
actggggaggacgggaggggaaagaatggggagggagagggggatgaagttcgggagagg
ggcttggtggttactaatttggagatggggaccggttgctcgagggattatcacccgggc
cctcctacagactttgctcaggctgttaccgcgaggttgcatcgtttactgctctccaat
aagctcatctcatcgcagtcactacgcatcctggatccgaacaccgaggaggtaaaagcg
tactgggtgctctacatcgacgccgtcgtcatctcccttgatggtaacgtcctcgacgcc
gcctgggcttccattcttgccgctctccgttctacaaggctaccgcaagcgtattgggat
caggataccgaggttgtcgtctgctatcccgaggtctcgagatacaagtcgctcgacgtc
aagggattggcattcactgcgtcgttcgcagtcatcgacttaggcgcggggaagggcggg
aaggtgatattgagtgatccggatgaatttgaggaaggggtttgtggggagcgggttatg
gtctgtgcactcgagggagagaaagtcgggtggatcgaaaaggggggtggagttgggcag
gtcgcggaggtggttgagtgtgtgcatcgggcgaccgaaaggttcaaaatctgggagcaa
ttgttcgcagaggtactggggagtagtgggtga |