KEGG   Tuber melanosporum: GSTUM_00010208001
Entry
GSTUM_00010208001 CDS       T01282                                 
Name
(RefSeq) hypothetical protein
  KO
K12586  exosome complex component RRP43
Organism
tml  Tuber melanosporum
Pathway
tml03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:tml00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    GSTUM_00010208001
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tml03019]
    GSTUM_00010208001
Messenger RNA biogenesis [BR:tml03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     GSTUM_00010208001
SSDB
Motif
Pfam: RNase_PH
Other DBs
NCBI-GeneID: 9186113
NCBI-ProteinID: XP_002841178
INRA: GSTUM_00010208001
UniProt: D5GLH6
LinkDB
AA seq 330 aa
MTTAPPPSPPPPNPLSFPPATFQKLAPKIFLERHLQSTPATRPSGRNPDTFRTPSLHTNS
LSHAHGSAVVRTGDTAVVCGVRGEVLSLAAGTGGRIVVLRTGEDGRGKNGEGEGDEVRER
GLVVTNLEMGTGCSRDYHPGPPTDFAQAVTARLHRLLLSNKLISSQSLRILDPNTEEVKA
YWVLYIDAVVISLDGNVLDAAWASILAALRSTRLPQAYWDQDTEVVVCYPEVSRYKSLDV
KGLAFTASFAVIDLGAGKGGKVILSDPDEFEEGVCGERVMVCALEGEKVGWIEKGGGVGQ
VAEVVECVHRATERFKIWEQLFAEVLGSSG
NT seq 993 nt   +upstreamnt  +downstreamnt
atgacaacggcacctccaccctcaccaccacctccaaatcccctctccttcccaccagca
accttccaaaaactcgcgccaaagatcttcctagaaaggcacttacaatccactcccgca
acccgtccttcgggtcgcaatcctgacaccttccgcaccccctcgctgcacacgaactcg
ctttcgcacgctcacgggtccgcggttgtccggacgggggatacggcggtggtatgcggt
gttcgcggagaggtattatcgctggcggcggggacagggggtaggatcgttgtcctgcgg
actggggaggacgggaggggaaagaatggggagggagagggggatgaagttcgggagagg
ggcttggtggttactaatttggagatggggaccggttgctcgagggattatcacccgggc
cctcctacagactttgctcaggctgttaccgcgaggttgcatcgtttactgctctccaat
aagctcatctcatcgcagtcactacgcatcctggatccgaacaccgaggaggtaaaagcg
tactgggtgctctacatcgacgccgtcgtcatctcccttgatggtaacgtcctcgacgcc
gcctgggcttccattcttgccgctctccgttctacaaggctaccgcaagcgtattgggat
caggataccgaggttgtcgtctgctatcccgaggtctcgagatacaagtcgctcgacgtc
aagggattggcattcactgcgtcgttcgcagtcatcgacttaggcgcggggaagggcggg
aaggtgatattgagtgatccggatgaatttgaggaaggggtttgtggggagcgggttatg
gtctgtgcactcgagggagagaaagtcgggtggatcgaaaaggggggtggagttgggcag
gtcgcggaggtggttgagtgtgtgcatcgggcgaccgaaaggttcaaaatctgggagcaa
ttgttcgcagaggtactggggagtagtgggtga

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