Tuber melanosporum: GSTUM_00010243001
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Entry
GSTUM_00010243001 CDS
T01282
Name
(RefSeq) hypothetical protein
KO
K03678
exosome complex component RRP45
Organism
tml
Tuber melanosporum
Pathway
tml03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tml00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GSTUM_00010243001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tml03019
]
GSTUM_00010243001
Messenger RNA biogenesis [BR:
tml03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
GSTUM_00010243001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
9186137
NCBI-ProteinID:
XP_002841202
INRA:
GSTUM_00010243001
UniProt:
D5GLK0
LinkDB
All DBs
AA seq
293 aa
AA seq
DB search
MPREIDPTINEKSFILDALNQKLRIDGRDLDSFRELELNFGDDYGLADVQLGKTRVLARV
SAEVVKPFTDRPFDGIFTITTELGPMASPAFEPGRQTEQEVLLSRLIEKAIRRSNALDTE
SLCIVAGQKCWQIRADVHFLSHDGALVDASCIAVVAALQHFRRPDVSVEGEKVTIHTMTE
RIPVPLSILHVPICVTFSFYLDGEVCLVDATLQEEQLRQGDMTITLNKFGELCQIAKAGG
LAINGLNLLRCAKIALVKVGEIAATVQRRLEEDAAARVRRDNLLESKADNERA
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atgccgagggagatagatccgacaattaacgaaaagagcttcattctcgacgcgctaaac
caaaagctccgaattgacggccgggacttggactcctttagagagttggagcttaacttc
ggagatgattatggactcgcagatgtgcaattgggaaagacccgtgtcctcgcccgtgta
tccgcggaagtagtaaagcccttcaccgaccgtccgttcgatggaatcttcacaataacg
acagagctaggtcctatggcctccccagctttcgagcccggccgtcaaaccgaacaagaa
gtcctcctttcccgtctcatcgaaaaggccatccgtcgctcaaacgcactagacaccgaa
tccctctgcatcgtcgccggacagaagtgctggcaaatccgcgcagatgtgcacttcctc
tcccacgacggtgccctcgtcgacgcctcgtgcatagccgtggtggccgcgctccagcac
ttccgccgcccggacgtctcggttgagggtgagaaggtcaccatccacacaatgaccgag
cggatccccgtgcccctgtctatcctacacgttcccatctgcgtcactttctcattctat
ctcgacggcgaggtgtgcttggtcgacgccacattgcaggaagagcagctgaggcaggga
gacatgacaatcacgctcaacaaatttggtgagctatgtcagattgcgaaggctggcgga
ttggccatcaatggattgaatttgctccggtgcgccaagatcgcgctggtcaaagttggg
gagatagccgctaccgtgcagaggcggttggaggaggatgcggctgccagggtgcggagg
gataatctattagagagcaaggcggataatgagcgggcttga
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integrated database retrieval system
