KEGG   Tuber melanosporum: GSTUM_00010435001
Entry
GSTUM_00010435001 CDS       T01282                                 
Name
(RefSeq) hypothetical protein
  KO
K03130  transcription initiation factor TFIID subunit 5
Organism
tml  Tuber melanosporum
Pathway
tml03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:tml00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    GSTUM_00010435001
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tml03021]
    GSTUM_00010435001
   03036 Chromosome and associated proteins [BR:tml03036]
    GSTUM_00010435001
Transcription machinery [BR:tml03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     GSTUM_00010435001
   Coactivators
    SAGA/TFTC/STAGA complex
     GSTUM_00010435001
Chromosome and associated proteins [BR:tml03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     GSTUM_00010435001
    STAGA complex
     GSTUM_00010435001
    TFTC complex
     GSTUM_00010435001
    SAGA complex
     GSTUM_00010435001
    SLIK complex
     GSTUM_00010435001
SSDB
Motif
Pfam: WD40 TFIID_NTD2 WD40_Prp19 WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 WD40_CDC20-Fz EIF3I Beta-prop_EML_2 Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd WDR55 WD40_MABP1-WDR62_2nd Beta-prop_WDR75_1st Beta-prop_EML Beta-prop_TEP1_C WD40_MABP1-WDR62_1st Beta-prop_SCAP ANAPC4_WD40 WDR90_beta-prop_4th NBCH_WD40 Beta-prop_IFT122_1st Beta-prop_DCAF4 Beta-prop_RIG_2nd Beta-prop_EIPR1 WD40_RFWD3 Beta-prop_SPT8 Beta-prop_Nup120_160 Beta-prop_HPS5 Beta-prop_IFT140_1st PROPPIN Beta-prop_Vps41 LisH Beta-prop_WDR19_1st DUF7165 VPS8_N Beta-prop_WDR11_2nd
Other DBs
NCBI-GeneID: 9186506
NCBI-ProteinID: XP_002841331
INRA: GSTUM_00010435001
UniProt: D5GLV5
LinkDB
AA seq 690 aa
MASQGTSATPGAGAHAAGSPQALNQIVIEYLSKKGYAKTEAMLRVESAHTDHEGRPILSN
LDDQPSIKYEKAYGHLKGWIENSLDIYKPELRRLLFPVFVHSFLQLVKEGYMKPSQDFFG
EHSAEHATAHAHDLKKFKAIFLPQHIDDDHLARLYRENKYKVNFSKTTSNLLMHFLEETE
DNGGRVILRIINDHIEMRTTAGRPTMFGEEEGILGEDEGITGHTSGRSESGAPLPALKLG
LLPMPPNFIADVKKGSLDEDAMGAENAAGGDFGVSLLDEFQKKIKREESEDSPMRDHIPL
PPYTGVDIEREVRLVKESREKMKLSGPPALALPSVLMYTFHNTNDGLQCVDFSEDGTIAA
GGFAESYVRIFSIKGAPLVSIIPTENVPAAPKTRRLIGHSGPIYGVSISPDKKYLLSCSE
DKSVRLWSLATYTALVSYKGHDSPVWDVRFGPYGHYFATASHDHTARLWSCDHIYPLRIF
AGHLDDVDTIIFHPNSAYVFTGSTDKTIRMWDVQTGNSVRLFTGHTGPVRALAISPNGKW
LASAGLDSTIMLWDIASGKRLKTMRGHGKTSIYSLTFSMEGTILLSGGADNTVRCWDVAY
GTGAPTAEAPEGVGATPAAGGGGVLPGGDGATKVDGTSTTGVPNKRKRTEIVATPDHLQV
FYTKKSPVYKVQFTRKNLCLAASANMPNAP
NT seq 2073 nt   +upstreamnt  +downstreamnt
atggcatcccagggaacttccgctactccaggagcgggagctcatgcggccggttcacca
caagcacttaatcaaattgtcatagaataccttagtaagaaaggctatgcaaagaccgaa
gctatgctccgtgtggaatcggcgcacacagaccacgaggggaggcctatcctatcaaac
ctggatgatcagcccagcatcaagtacgaaaaggcttatggtcatttgaaaggttggata
gagaattcgctggatatttacaaaccggagttgcggaggcttttattccctgtttttgtt
cactcgttcctacagcttgtcaaggaaggctatatgaagcccagccaggatttctttggg
gagcactctgctgaacacgccactgcccatgcccacgatttaaagaagttcaaagcaatt
ttcctcccgcagcatatcgacgatgaccacttggcgagattgtaccgcgagaacaaatac
aaggtcaacttctccaagacgacgtctaatctcttgatgcactttctggaggagactgag
gataatggtggaagggttatacttaggatcatcaacgaccatatcgagatgagaactact
gcagggcgccctaccatgttcggagaggaggaaggaatcctgggtgaggacgagggaatc
accggtcatacttccggacgctcagaatccggggcgccactaccagcgcttaaacttgga
ctcttgcctatgccccccaactttattgctgacgtgaaaaagggttcgttggatgaagat
gctatgggagcggagaatgccgcagggggcgacttcggtgtcagtttactggacgaattc
caaaaaaaaataaagagggaagaaagtgaggacagccccatgagggaccacatcccctta
ccaccatataccggggttgacatcgagagggaggttagactggtgaaggaaagtagggag
aaaatgaagttgtctggccctccggcgctagcgcttccgtcagtgctcatgtatacattt
cataacactaacgatggtctccaatgtgttgacttctcggaggatggcacgatcgcggcg
ggcggcttcgcagaatcatatgtccggatattctccataaaaggcgcacccctagtgtct
atcatcccaactgaaaacgtccctgccgctcccaagactaggcgtttgatcggacattcg
ggtcctatctacggagtctccatctcaccggataagaagtacctcctctcctgttccgag
gataagtcagtccgcctctggtccttagccacgtacacagccctagtctcgtataaaggc
cacgacagtccagtctgggacgtacggtttggcccatacggacactacttcgccacggcc
agccacgaccacacagccagactctggagctgcgaccacatctacccgctccgcatcttc
gccggccacctggacgacgtagacaccatcatcttccatcccaattctgcatatgtcttt
accgggtccaccgacaagaccatccgcatgtgggacgtccagacaggaaactccgtccgt
ctgttcaccggacataccggccccgtcagggctttggctatcagtcccaacggaaagtgg
ctcgcttctgcaggactagacagcaccatcatgctctgggacatcgccagtgggaagcgt
ctgaagactatgagaggccatggtaagaccagtatctactcgctaaccttctcaatggag
ggtacaatcttgctcagcggcggcgcggataatactgttcgctgctgggacgttgcgtac
gggactggcgctcctacggctgaagctccggagggtgttggtgcaactcccgctgctggt
ggtggcggagtgctccctggcggggatggagctacaaaggttgatggtacatccacgact
ggtgtgcctaataaacgcaaaaggacggagattgtcgctacccctgatcacctccaagta
ttctacaccaaaaagtcacctgtctacaaggtccaattcacccgcaagaatttgtgcctt
gcagcttctgccaacatgcctaatgcgccctaa

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