Tuber melanosporum: GSTUM_00010474001
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Entry
GSTUM_00010474001 CDS
T01282
Name
(RefSeq) hypothetical protein
KO
K18719
nucleoporin NUP82
Organism
tml
Tuber melanosporum
Brite
KEGG Orthology (KO) [BR:
tml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tml03019
]
GSTUM_00010474001
Messenger RNA biogenesis [BR:
tml03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
GSTUM_00010474001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup88
Motif
Other DBs
NCBI-GeneID:
9187331
NCBI-ProteinID:
XP_002841360
INRA:
GSTUM_00010474001
UniProt:
D5GLY4
LinkDB
All DBs
AA seq
858 aa
AA seq
DB search
MATVDDDRLPWLSRPSTGYDLFTKTPENPTSYPSLVTTEDEGTAVGPMRVMANRGTEIFV
GRGNEVRCADLQDLKARHTPRAGIRGGGHREYKMLDLPELDFEIHQLEISRDGLLLAIIG
EKELAVCVLPAEGLARMDGSKLRVPAFNMVGPNYHNSEKGSRIVRAIWHPLGVEGASLVV
LTSESIVRTYDFTIGQDFTFEIPDQTFDLHALGGRARHVGGFFADGEEMEAASCCFGDGY
QGWRPFTLYILMRGGDVYALTPVVPSRWKAPREYLQSLSLDISWGLENLEGNVTTEEKLV
LRQQTKWINHVLNQEANIGAVYIGSTVSPRKKALTCLVRPGIVGPIPQLQGPFLFQPAPP
ELSSDEYGCDIFHIEHHPVGVIGILFSNGKVDICMEPESLKAKWVDKRIRRKGAEDESDQ
STQGLPVISGYETIDLGFPPGSSCSGISWPVFSRDPQSNQVWYINHNLGVAAISMKPWLS
KLATVLDGDEDDGFVAKSMEKNPQSTVYKPIQNANKPQSLARPMIGSVAVYEAYLGYLLI
AATKTNSQSVEFEDVQGRASGVDPRASSITTTRSLVHTSQLSLTQSPAHCGHQHRLSLLT
SHFTSPPELTIPSALHNLLKPTNPQHKKLLASPIHFTTETNDLLRAARDTLKMEYDRIME
IAQEMYDRATAQRIEFRKQLESIHKASEILTRIQNRDVRARLDRFLTRQEELQARADGVL
RILIVKNELGIGDAEKKWFREVAKVEEKIGGGAEKEQEEEEEREGAEEAEKDSNTLAGRR
EIVARLAGELCPLVGEDGASPGEGRRGMKTVVGRGEDVPEEVRMGKLRILRELLEREDAL
VKATKKKLENLTLEAERV
NT seq
2577 nt
NT seq
+upstream
nt +downstream
nt
atggccaccgtcgacgatgaccgcttgccgtggctgtcgcgcccttctaccggctatgat
ctcttcaccaagaccccagaaaatccgacctcttatccttcgcttgttaccaccgaggat
gaggggactgcggttgggcctatgagggtgatggccaatagagggacggaaatatttgtt
gggagggggaatgaagttcgctgtgctgatcttcaggatttgaaagcccggcatacccct
agggctggtattcgggggggtgggcatagagaatacaaaatgttagatttaccggagctg
gatttcgaaattcatcagctggaaatcagtcgagatggacttcttttagctatcatcggc
gagaaagagcttgcggtgtgtgtgcttccggcggagggcctggcgagaatggatggctca
aaactgagggttcctgcttttaacatggtcgggccaaactatcataactctgagaagggt
tctcgaattgtccgggcgatatggcatcctcttggagtcgagggtgcctcgttagtggtt
ttgacttctgagagtatagtcagaacctacgattttacaattggtcaggattttacgttc
gagataccagatcaaacattcgatcttcatgcgttgggcgggcgcgcacgtcatgtcggc
ggtttctttgccgatggagaagaaatggaggcggcctcctgctgttttggcgatggttat
caaggttggaggccatttactctatatattctcatgaggggtggagatgtctacgcactt
acacccgtggttccaagccgctggaaggctcctcgtgagtatcttcaaagcctttcgctc
gacattagttggggccttgagaaccttgagggcaatgttacaacggaagaaaagttggtt
cttcgccagcagaccaagtggattaatcatgtcttgaaccaagaggccaatattggcgcg
gtatatattgggtctaccgtatccccacggaaaaaggcgttgacatgtttggttcgtcct
ggaattgttggtcctataccgcagttacaaggtccttttttgttccagccagcgccacca
gagctctctagtgatgagtacggctgcgacatcttccatatcgagcatcatcctgttggt
gttattggtattttgttctcaaatggaaaagtcgatatttgcatggagcctgagtcactg
aaggccaaatgggttgacaagaggattagacgtaaaggggcggaagatgaatcggatcaa
tcgacacagggcctcccggtcatctcgggatacgagaccatagatctcggctttccgcca
gggagcagttgttcgggaattagctggccagtcttctcccgcgatccacagtctaatcag
gtgtggtatatcaatcacaatctcggtgtggcagcaatctcgatgaagccgtggttgagc
aagctagctacggtcctggacggtgatgaagacgacgggtttgttgccaaatccatggag
aaaaatccgcaatctacagtctacaagccaatccagaacgccaacaaacctcagtccctt
gcaaggcctatgattgggagcgtagcagtctatgaagcttatctcggctacctccttatc
gctgccacaaagaccaactcccaaagcgtcgaattcgaggacgtgcaaggccgcgcctct
ggagtcgacccacgcgcatcatcgataaccaccacccgctccctcgtacacaccagccaa
ctctccctcacccaatctccagcccattgtggccaccaacaccgcttgtccctgttaaca
tcccacttcacatccccgccagagctaacaatccctagcgctctccacaacctcttaaag
cccaccaacccacaacacaaaaaactcctagcgtcccccatccacttcaccaccgagaca
aacgacctcctgcgcgctgcgcgcgatacgctcaaaatggaatacgaccgcataatggaa
attgcgcaagaaatgtacgatcgggcaacagcccagcgcatcgaattccgcaagcaacta
gaaagtatacacaaagccagtgaaatccttacgcgcatacagaacagggatgtacgtgcc
cgactagaccgcttcctgacgcgccaggaggaactacaagcgcgcgcggatggggttctc
agaatcctcatcgtcaagaacgagcttggaatcggcgatgcggagaagaaatggtttcgc
gaagtcgccaaagtagaagagaagattggtggtggcgcggaaaaggagcaggaggaggag
gaggagagggagggggcggaggaggcggaaaaggattcgaatacgctggctggaagaagg
gagattgtcgctcgcttggcgggagaattgtgtcctcttgttggcgaagacggagcgagc
cccggcgagggccgtaggggaatgaagacggttgttggcaggggtgaggacgtgccggaa
gaggttagaatgggcaaattacggattttaagagagttgttggaaagggaggacgctctc
gtgaaagctactaagaagaaactggaaaacttgaccttggaggcggagagggtctag
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