Tuber melanosporum: GSTUM_00010485001
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Entry
GSTUM_00010485001 CDS
T01282
Name
(RefSeq) hypothetical protein
KO
K14315
nucleoporin NDC1
Organism
tml
Tuber melanosporum
Pathway
tml03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tml00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
GSTUM_00010485001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tml03019
]
GSTUM_00010485001
Messenger RNA biogenesis [BR:
tml03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
GSTUM_00010485001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ndc1_Nup
Motif
Other DBs
NCBI-GeneID:
9187341
NCBI-ProteinID:
XP_002841370
INRA:
GSTUM_00010485001
UniProt:
D5GM18
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All DBs
AA seq
289 aa
AA seq
DB search
MLAFWELAYLAQNSAARRKAIYTDVNRKPANIFEQILSQSLSVLGEVDLKLAEVRNPPAP
TALILATPSSTAASAIPSPPPIPISQINPLLISPVSSTHKFLEGVQSKDGSTPTLQHVIE
KLPCQPPSIAEVEASATKSFKSKMEPFLSSPWGSMFRQSIHATTSQLIPNVGLQVNAVQA
ISRLVTSSLAEDEYGIVQSHAPTLLASFISMMDTLDKYIASPPISWTDVESIQKQEKGEL
HLAEPHLLLSTLKEGFKDIATAYAPYIDDMGLASDTRKIILETRERGLP
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgttggctttctgggaattggcttaccttgcacagaattcggcggcgcgtagaaaggca
atatacaccgatgtcaaccgcaagccagccaacatctttgagcaaattttgagccagtct
ctatctgtccttggtgaagttgacttaaaactcgcggaagtcaggaaccccccggcgcct
accgcgttaatattggcaacacctagtagtaccgcagcatcggccattccatctccccct
ccgattcctatcagtcaaatcaatcccttgttaatttccccggtctcttcaacacataaa
tttctggagggtgtccaatcaaaagatggatcaacccccaccctccaacatgtaattgag
aagcttccctgtcagccgccatcaatcgcagaagtagaagccagcgccactaaaagcttt
aaatcgaaaatggagccgtttctctcatctccttggggcagcatgtttagacaaagtata
cacgctacaacctcacaacttattccaaatgtgggattgcaggttaatgctgtacaagca
atttcccgcctggtaacctcgtcccttgcagaagatgaatatggcattgttcaaagtcat
gcccccaccctcctcgcttccttcatttcaatgatggatacgctcgacaagtatattgct
tctccgccaatcagttggacagacgtggaatctatacaaaaacaagagaagggcgaacta
catctagcggaaccgcatttgctactttccacccttaaagaaggctttaaggatattgcg
acagcatacgcgccgtatattgatgacatgggacttgcatccgatactaggaaaatcatt
ttagaaactcgagaaagaggtttaccataa
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