Tuber melanosporum: GSTUM_00010486001
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Entry
GSTUM_00010486001 CDS
T01282
Name
(RefSeq) hypothetical protein
KO
K11373
elongator complex protein 1
Organism
tml
Tuber melanosporum
Brite
KEGG Orthology (KO) [BR:
tml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tml03016
]
GSTUM_00010486001
Transfer RNA biogenesis [BR:
tml03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
GSTUM_00010486001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_ELP1_1st
Beta-prop_ELP1_2nd
A-sol_ELP1
HB_ELP1
TPR_ELP1
WD40_CDC20-Fz
LLCFC1
Motif
Other DBs
NCBI-GeneID:
9187342
NCBI-ProteinID:
XP_002841371
INRA:
GSTUM_00010486001
UniProt:
D5GM19
LinkDB
All DBs
AA seq
1195 aa
AA seq
DB search
MRNLLTIERSVAGTTSTNVPDLPLSAITWGGSEDSLICTHGPSEAEAAVELKRVNKNGQS
VPIASWDASPCLSPSLACDRILVLHYFPDTFSTCVIFAAGDIVVVQEDPTPGVNKIEIVG
SVDEGITAAAWSPDEEILAIATGASTLLLMTRAFEPIADVILSPNDLNASKHVSVGWGKS
ETQFKGKRVKAMRDPTVPEKIDEGVLSPHDDNGTRISWRGDGEYLALSSVEDSKRRIIRV
YSRDGSLDSISEPVDGLEGPLSWRPAGNLMVGIQRLPERLDVVFFERNGLRHGEFTLRIP
PDKISNEKILELLWNHDSSRSCGGYHVAQHNLYVKWHSEKPLLLALGLGESIISYEFSWS
VFAGSSRSPDDHGVLAVVDGTTLKLTPLRVANIPPPMALTEVELKSTPVDVAISPTGRLI
AVLRDKALDLIRWDFARNKLVSGPILTSDIMEFDTGQCFRQISFADDETLGVVCDMKVGS
ALQVISIPNNRQAISKCTHEFQNGATAARLGGVPDHKHLFYQDSERKVYFYDTENKSAKF
VTQLPAICPWLEVAFYQKMVFGLSGDGRLYVNSKSIASNCTSFAITPAHLVFTTTRHFVK
FVHLHHSHQDLDIPGDDPSSDERCRSIERGARLVQVMPTKFALTLQMPRGNLETIYPRVL
VLAGIRRSIEAKDYLTAFLACRSHRVDLNIIHDHAPGQFIRLVELFIDQVNEIEYIDLFL
SQLREEDVSKAMYRETSQSAEVSETLNQISATNSSKSKVNTICDAFLNVLLPKRLSSHLQ
NIVTAYVCKTPPDHDAALLLIGYLREKNPELAEEAIQHVCFLSDVNKLYDNTLGLYDLEL
TLMVAQQSQKDPREYLPFLQKLQEMEARRRKFTIDDHLNRPAKACSRLYELGDEVFDEMK
DYVVKHELYSVALGLCKYCPKKTGDHGLVCDFPRRSLEISRRRISVRISWRLLTGDPMLP
SCWAMARSSLRRRSSNEIGNKHGKSELLVTVVDAGLSEGFAQTSELIAECKRQLKAQLDR
IHELRTKKEQNPLAYFDGVTEEDAPDNVSLAPTNASTSASLFTRYTSGGAQTAMTGATRR
TFKNRRREERKRARGKKGSVYEEEYLVSSIGRMIEKLDSVRDETKKLLEGLVRRRMRERA
TALQTLMEELLASLEGCVREVFEEAGEVVNPEAGAEGGGKRVVPIIKKFDGVGIL
NT seq
3588 nt
NT seq
+upstream
nt +downstream
nt
atgcgtaacctccttaccatcgagcgctccgtcgctggcaccacttccaccaacgttcca
gacctccccctctctgctatcacttggggtggatctgaggattcactcatatgtactcat
ggcccttctgaggccgaagctgccgttgagctgaaacgtgttaacaagaatggccaatcg
gttcccatcgcatcgtgggatgcttcgccctgtctatcgccatcgttggcttgcgatcgc
attctcgtcctgcattatttccctgatacgttctcaacctgcgtaatatttgctgcaggt
gacattgtggtcgttcaggaagaccccacccctggagttaataaaatagaaatcgttgga
tctgttgatgaaggtataaccgctgcagcatggtctcccgatgaagaaattctagccatt
gccactggtgcatcaaccttgcttcttatgacacgagcgttcgaacccatcgccgacgtc
attctttcgccaaatgatctcaatgcttcaaaacatgtctctgtgggatgggggaaatca
gagactcagtttaaagggaaacgggtgaaagctatgagagatccgactgttcctgagaag
attgacgaaggtgttctcagcccccacgacgataacggtacgaggattagttggagaggg
gatggtgaatatctcgctttgtcctctgtggaggattcgaagaggagaatcattcgagtt
tacagccgagatggttccttggatagtatcagcgaacccgttgatggtttggaagggcct
ctgagttggagaccagctggaaaccttatggtcggcatccaacgcctccctgagagactc
gatgttgttttttttgagcgaaacggtctccgacacggggaattcacactaagaataccg
ccggataaaatctccaatgagaaaatactggagttactctggaatcatgactcctcgcgc
agctgtggaggatatcacgtagcgcaacataatttgtatgtgaaatggcattctgaaaag
cctctgctgcttgcgctcggactgggtgagagtattataagttacgaattctcctggtct
gtgttcgcaggttcttcgagatcaccagatgatcatggtgtcctagcagtcgtagacgga
actaccctcaagcttacaccattgcgtgttgccaacattccgccaccaatggcgctcaca
gaagtagaactcaagtctactccagtggatgtagctattagtcctactgggcgccttatt
gccgtccttagagataaggcattggatttaattcgatgggatttcgccagaaacaaactt
gtttcgggtccaatcctcacctcagacatcatggagtttgacacaggtcaatgtttccgc
cagatctctttcgccgatgatgagacgttaggagtggtctgtgacatgaaggtgggcagt
gctttacaagtgatatcaattccaaacaatagacaagcaatttctaaatgcacacatgaa
tttcaaaatggtgccactgctgcgcggttgggaggtgtaccagaccacaaacatcttttc
tatcaggatagcgaacggaaagtttatttctatgacacagagaacaagtctgcgaaattt
gttacacaactcccggctatttgcccctggctagaggtagccttctatcaaaaaatggtc
ttcggcctctctggcgatggccgactctacgtgaattctaaatcgatagcttcgaattgc
acatcatttgcaatcaccccagctcatttggtatttacgacaacacgacactttgttaaa
tttgtgcacttgcaccatagtcaccaagacctagatataccaggagatgacccaagtagt
gatgagcgctgccgaagcattgagagaggggctcgattggtacaagtgatgccaactaaa
tttgcattaactttacagatgccacgagggaacttggaaacaatataccctcgcgttttg
gtgctggcgggaattagaaggagcattgaagccaaggattaccttactgcatttctagcg
tgcagaagccatcgcgtggatctcaatatcatacatgaccatgcacccgggcagtttatt
aggttggttgagttgtttatagatcaggttaacgaaattgaatacattgatttgtttttg
tcacaattaagggaagaggatgtttcaaaagcgatgtaccgagagacctcgcagtcagct
gaggtttcagagaccttaaatcagattagcgccactaatagttccaaatcgaaagtaaac
acaatatgcgatgcttttcttaatgttctactaccaaagcggctttcaagtcaccttcaa
aacatcgtcaccgcctatgtttgcaaaacaccgccggatcatgatgcggcgctactattg
attggatatctccgagagaaaaaccccgagctcgctgaagaggcgattcagcatgtttgc
ttcttatccgatgtgaataaactctacgacaatactctagggctctacgaccttgagctc
acactcatggtagcccagcaatcccaaaaggacccccgagaatatctaccattcctacag
aagcttcaagagatggaggccagacgacgcaaattcacaatcgacgatcacctcaatagg
cctgcaaaggcctgttctcgtttgtacgagcttggtgacgaggtatttgatgaaatgaag
gattatgttgtgaaacatgaactctattcggtggctctggggttgtgcaaatactgcccc
aaaaagacaggtgatcatgggcttgtatgcgattttcctcgaaggagtctcgagatatcc
cgacgccggattagcgtacgaatatcttggagattactcacaggcgacccaatgttaccg
tcgtgctgggctatggcaagaagctctcttcgccgccgctcaagcaatgagattggcaac
aaacacggaaaatcagagcttctagtcactgtggtggatgctggcttgtcggagggattt
gcacaaacttctgaattgatagcggaatgcaagagacagctaaaagcacaattagatcgt
atacacgagctccgcacaaagaaggaacagaatcctttggcctactttgatggagttaca
gaagaagacgctccagataatgtctctttagctccaactaatgcgtcaacatctgcatcc
ctctttacaaggtacacctccggcggtgcacaaaccgccatgacaggagctactcgccgt
accttcaagaaccgccggcgcgaagagcgcaagcgggcccgcggcaagaagggcagtgtt
tacgaggaagagtatctcgttagctcaatcggccgtatgattgaaaagcttgactcggta
agagatgagactaagaagttactagagggccttgtccgtaggaggatgagggagagggcc
accgcgttgcaaactttgatggaggagctgttagctagtttggagggatgtgttagggaa
gtctttgaggaggctggcgaagtagtcaacccagaagccggcgctgaagggggcgggaag
agagtcgttccaatcattaaaaaatttgacggagtcggaatcttgtaa
DBGET
integrated database retrieval system